FFCP PHASE1:Hg19::chr12:69140023..69140055,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55508 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20864 | |||
|TSSclassifier=strong | |||
|UniProt=Q7Z769 | |||
|association_with_transcript=87bp_to_NM_018656,uc001suh.2_5end | |||
|description=CAGE_peak_4_at_SLC35E3_5end | |||
|id=chr12:69140023..69140055,+ | |||
|ontology_enrichment_celltype=CL:0000860!1.43e-17!45;CL:0002057!2.32e-16!42;CL:0000766!5.06e-16!76;CL:0002194!5.35e-16!63;CL:0000576!5.35e-16!63;CL:0000040!5.35e-16!63;CL:0000559!5.35e-16!63;CL:0002009!8.84e-16!65;CL:0002087!7.50e-14!119;CL:0000557!1.48e-13!71;CL:0000839!2.11e-12!70;CL:0000738!6.29e-12!140;CL:0002031!4.36e-11!124;CL:0002032!5.62e-09!165;CL:0000837!5.62e-09!165;CL:0000763!1.40e-08!112;CL:0000049!1.40e-08!112;CL:0000037!1.84e-08!172;CL:0000566!1.84e-08!172;CL:0000988!3.30e-07!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.97e-14;33!CL:0002057;4.97e-14;33!CL:0000473;5.34e-12;39!CL:0000234;5.34e-12;39!CL:0000576;1.78e-10;48!CL:0000766;1.47e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,3.06e-19,48;CL:0000234,3.06e-19,48;CL:0000860,3.57e-19,42;CL:0002057,3.57e-19,42;CL:0002194,5.38e-18,59;CL:0000576,5.38e-18,59;CL:0000040,5.38e-18,59;CL:0000559,5.38e-18,59;CL:0000766,7.69e-18,72;CL:0002009,1.23e-17,61;CL:0000557,5.00e-15,67;CL:0000839,3.94e-14,66;CL:0002087,2.88e-13,115;CL:0000738,3.50e-12,136;CL:0002031,7.35e-11,120;CL:0000763,1.04e-09,108;CL:0000049,1.04e-09,108;CL:0002032,1.16e-08,161;CL:0000837,1.16e-08,161;CL:0000037,2.36e-08,168;CL:0000988,3.72e-07,177 | |||
|ontology_enrichment_development_v019=CL:0002057;7.10e-14;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!8.48e-13!115;UBERON:0001474!3.43e-12!86;UBERON:0002371!6.60e-12!80;UBERON:0002390!1.31e-11!102;UBERON:0003061!1.31e-11!102;UBERON:0002193!2.02e-11!112;UBERON:0004765!2.57e-09!101;UBERON:0001434!2.57e-09!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,1.16e-13,82;UBERON:0002371,3.02e-13,76;UBERON:0002390,1.66e-12,98;UBERON:0003061,1.66e-12,98;UBERON:0002405,2.09e-12,93;UBERON:0002193,8.55e-12,108;UBERON:0004765,1.67e-11,90;UBERON:0001434,4.94e-09,100 | |||
|phase1_expression=2.36181893051724,1.71280419112787,2.67813367782345,2.00146596706261,0.893922188854576,1.74467704820074,2.53299878168311,0.631719873426831,0.783556884599516,0.491467873003018,0,0,0,0,0,0.672325146451775,0.602694528023977,0,1.46379839637152,0,0.204000691244253,0.313454721478088,0,0.136874425072884,0.376627918784408,0.0764134057479513,0.246301768349837,0.472264687882075,1.96682138424452,2.30297638858328,2.16742572642506,0.919421224478927,0.6024118375565,0.369754010166788,7.51431845628926,6.25544622944655,0.587200878669695,2.76997704265939,2.80762226458198,1.51907609501096,1.56740831967947,1.94336199611388,0.77272670290256,6.25212426752128,4.91238726795452,7.5201058968223,8.83230340241602,6.98985409637104,2.78735733805593,3.45230870786581,0.512321413058201,2.36482229888585,3.7922024881028,3.87290810150296,10.8341189275473,5.08254316765033,6.00393530127261,4.94391665779186,3.97909060082173,2.88836124368484,5.11469700639233,1.31940520074686,1.79517291859469,2.55734850319616,3.48251086354301,2.8369261234557,4.9825779919646,1.00499466102697,1.5644487552606,1.73751075764093,5.44859552370032,5.89244217580104,5.06339819905415,1.47878700418359,1.4882300997553,1.04829322754188,0.898629049171961,0.750884464207532,0.48217676009124,2.85012743741249,3.58050018958362,3.28795476776341,1.75996244461323,0,0.889509253863555,0.853460445133014,0,0,1.32208974556972,1.90810750907073,0,1.17447437874188,0.764546456250458,0,1.12101712596307,0.526768169550154,1.37696839079683,0.786021525498329,3.90642848099067,1.33749196312542,0.32592226663359,0.473447805734733,0,1.00269411196656,10.3112067616193,4.43067789167242,5.41607727530031,1.40900451698243,2.60118695119756,0.164437904603676,0.829050053357545,0,0.296573126324121,0.535081656179426,0,0.679856056185397,0.383220493601921,1.37450978193052,0.506039384039006,0.637130828648193,0,0.950452044448374,0.451725357233318,0.127986611154418,0,0,0.821127996921047,2.62088766192152,2.40696176205157,0.868946423296794,0,0,0.511450247374121,3.97583067623023,1.00267582127178,0.869079113764942,1.5905718941022,0.973269740605272,0.189069634328136,0,0.175669571386252,0.458426764241994,1.09288586487763,0,6.49094787309367,7.66170844116776,5.05240249971688,0.476981248610684,0,0.371457501329565,0.596287222100115,1.72046919021225,0.347140501607594,0.56530794192401,0,0.275118041940067,0.417989933073621,1.03366703667732,1.06729878806013,1.00416183829401,0.402829317109147,0.760272105718513,0,1.10298924103761,0,0.267899184852239,0.44905874525234,0.112611480483322,0,0,0.549605231791222,2.63560834872127,7.75560528296651,0.436094052142534,0.496971951695318,0.506522046658319,1.19168262731897,1.72101972449288,0,0,0,0.24666754841716,0,1.61652806483626,1.14423332179421,0.151357427644931,0,0,0.624320153660641,0.570471821544449,1.64393548606981,0.117434498643765,0.485618833104395,0.421352420106746,0.408308342509787,0.122834317311768,0.619954687054593,0,0.247266929278557,2.73048408581408,0,0.168336113954066,0.125118519871964,0.554128230968366,0,0.30648779579902,0.901428353439581,0.680593098960126,2.15267562826634,0.427114777637135,0.211931901159562,1.50045548042201,0.824420233907511,0.515281080091258,1.11670113798954,3.20675031258406,0.68205903612839,0.504867548488229,0.920498986422993,0.323292113637624,0.710019185033229,1.61203357164224,0.339121184620975,2.51239109112286,0.545492241181669,1.43402297694502,0.365921118388786,0.397589304964456,0.348581828608555,1.0366105501537,1.7662459561294,0,0,1.28648187638577,0,2.78620756819187,7.21879481669586,2.72105640091641,2.86593973132773,1.92808823906786,1.98529150918309,2.17879444092406,1.89816495288877,2.56179485504312,3.33576490713088,1.15424147083917,1.4763109092493,0,0.8231480226628,0,3.80265104465493,4.91413608338813,2.36315962672562,0,1.47586126251736,0.343135620597051,1.09750285408626,0,0.301586917234893,0.925884451585296,0.651616610620649,1.03993478527958,0,0,0.352226082707465,0.577465791044295,0.925971025153221,0.570762456703795,1.58040879591855,0.858486162094873,0.984868024349589,2.57404691653161,2.22946743433092,2.81201501960331,0.839910640994298,0.283550194484773,2.7763142037883,2.61570544662566,0.383382679165211,0,0,0.829312462163088,0.288239906833923,0.6312121671319,0.444485260045183,1.52795370223311,0,0,0.514137463516618,1.50171528921959,0.285826432630578,0.448524337381443,0.87192013766656,0.51336800074665,1.03417372606222,0,0,0.531876233169741,0,0.514414748524284,0,1.5985330740966,0.142977993658148,0.542621605391443,0,0.325736184293735,0.355391948742546,0,1.80863626235752,0.871533458600294,0.699810938274399,2.43247561282381,1.50677127429638,0,0.479249710983165,0,0,4.48822050669496,0.410952645100767,0.895304816199478,2.24170287987055,3.94061520403854,1.94064817373566,3.33691894327346,0.508189248444927,0,0.773288812777695,0.167516265334349,0,0.749007023947182,2.99161459204025,1.65766205374414,0,0.500170521059677,0,1.03985430765404,0.356857977594324,0.315404830067869,0.468565659970853,0.902838299183157,2.27407504055985,0,0,0.737476674166813,1.129486988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| |||
|short_description=p4@SLC35E3 | |||
}} |
Revision as of 14:32, 11 January 2014
Short description: | p4@SLC35E3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SLC35E3_5end |
Coexpression cluster: | NA |
Association with transcript: | 87bp_to_NM_018656, uc001suh.2_5end |
EntrezGene: | SLC35E3 |
HGNC: | 20864 |
UniProt: | Q7Z769 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 3.06e-19 | 48 |
phagocyte | 3.06e-19 | 48 |
classical monocyte | 3.57e-19 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.57e-19 | 42 |
monopoietic cell | 5.38e-18 | 59 |
monocyte | 5.38e-18 | 59 |
monoblast | 5.38e-18 | 59 |
promonocyte | 5.38e-18 | 59 |
myeloid leukocyte | 7.69e-18 | 72 |
macrophage dendritic cell progenitor | 1.23e-17 | 61 |
granulocyte monocyte progenitor cell | 5.00e-15 | 67 |
myeloid lineage restricted progenitor cell | 3.94e-14 | 66 |
nongranular leukocyte | 2.88e-13 | 115 |
leukocyte | 3.50e-12 | 136 |
hematopoietic lineage restricted progenitor cell | 7.35e-11 | 120 |
myeloid cell | 1.04e-09 | 108 |
common myeloid progenitor | 1.04e-09 | 108 |
hematopoietic oligopotent progenitor cell | 1.16e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.16e-08 | 161 |
hematopoietic stem cell | 2.36e-08 | 168 |
hematopoietic cell | 3.72e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
bone element | 1.16e-13 | 82 |
bone marrow | 3.02e-13 | 76 |
hematopoietic system | 1.66e-12 | 98 |
blood island | 1.66e-12 | 98 |
immune system | 2.09e-12 | 93 |
hemolymphoid system | 8.55e-12 | 108 |
skeletal element | 1.67e-11 | 90 |
skeletal system | 4.94e-09 | 100 |