FFCP PHASE1:Hg19::chr12:78334695..78334719,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:78334695..78334719,+ | |||
|id=chr12:78334695..78334719,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.96e-36!180;CL:0000057!8.07e-35!75;CL:0000222!1.33e-17!119;CL:0002620!2.93e-17!23;CL:0000144!1.35e-16!625;CL:0000548!1.74e-16!679;CL:0000004!1.74e-16!679;CL:0000255!1.74e-16!679;CL:0000012!4.66e-16!682;CL:0002371!6.90e-16!591;CL:0000680!1.07e-14!57;CL:0000056!1.07e-14!57;CL:0000355!1.07e-14!57;CL:0000048!1.96e-13!430;CL:0000723!6.29e-13!436;CL:0000187!1.14e-12!54;CL:0000034!8.19e-12!444;CL:0000183!8.68e-12!59;CL:0000220!1.46e-11!246;CL:0002321!3.21e-11!248;CL:0000003!3.94e-11!722;CL:0000192!1.67e-10!42;CL:0000514!1.67e-10!42;CL:0000393!4.18e-10!60;CL:0000211!4.18e-10!60;CL:0002334!9.03e-10!12;CL:0000359!2.32e-07!32;CL:0002570!7.97e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0002620;2.79e-23;23!CL:0000057;2.67e-15;73!CL:0002334;6.25e-15;12!CL:0002570;4.49e-10;8!CL:0002551;6.67e-09;6!CL:0002556;4.40e-08;6!CL:0002559;1.51e-07;5!CL:0000680;6.15e-07;7!CL:0002320;6.63e-07;188 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.86e-37,76;CL:0002620,2.69e-23,23;CL:0000048,9.54e-19,427;CL:0000723,4.80e-18,433;CL:0000034,3.84e-17,441;CL:0002334,3.27e-15,12;CL:0000680,6.93e-11,58;CL:0000056,6.93e-11,58;CL:0000355,6.93e-11,58;CL:0002570,4.62e-10,8;CL:0000134,2.69e-09,354;CL:0002551,5.00e-09,6;CL:0002320,1.06e-08,361;CL:0000187,1.51e-08,55;CL:0002556,3.80e-08,6;CL:0000219,6.62e-08,386;CL:0000192,7.77e-08,43;CL:0000514,7.77e-08,43;CL:0002559,1.59e-07,5;CL:0000393,4.25e-07,61;CL:0000211,4.25e-07,61;CL:0000359,9.95e-07,32 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;7.20e-09;5!DOID:450;7.20e-09;5!DOID:66;7.20e-09;5!DOID:423;7.20e-09;5!DOID:0080000;7.20e-09;5!DOID:11722;7.20e-09;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,7.64e-09,5;DOID:450,7.64e-09,5;DOID:66,7.64e-09,5;DOID:423,7.64e-09,5;DOID:0080000,7.64e-09,5;DOID:11722,7.64e-09,5 | |||
|ontology_enrichment_uberon=UBERON:0000914!1.53e-20!83;UBERON:0002329!1.53e-20!83;UBERON:0003077!1.53e-20!83;UBERON:0003059!1.53e-20!83;UBERON:0007282!1.53e-20!83;UBERON:0009618!1.53e-20!83;UBERON:0007285!1.53e-20!83;UBERON:0003102!3.36e-19!95;UBERON:0004290!4.73e-18!70;UBERON:0000486!6.95e-17!82;UBERON:0002199!5.86e-15!45;UBERON:0002416!5.86e-15!45;UBERON:0005256!4.94e-13!143;UBERON:0002097!6.49e-13!40;UBERON:0000055!7.14e-13!69;UBERON:0001134!9.21e-13!61;UBERON:0002036!9.21e-13!61;UBERON:0003082!9.21e-13!61;UBERON:0000490!1.30e-12!138;UBERON:0002100!2.40e-12!216;UBERON:0000475!2.90e-12!365;UBERON:0002049!4.84e-12!79;UBERON:0007798!4.84e-12!79;UBERON:0002385!6.67e-12!63;UBERON:0001015!6.67e-12!63;UBERON:0000383!6.67e-12!63;UBERON:0001981!5.19e-11!60;UBERON:0007500!5.19e-11!60;UBERON:0004537!5.19e-11!60;UBERON:0006965!5.19e-11!60;UBERON:0004872!1.51e-10!84;UBERON:0001637!2.61e-10!42;UBERON:0003509!2.61e-10!42;UBERON:0004572!2.61e-10!42;UBERON:0004573!4.83e-10!33;UBERON:0004571!4.83e-10!33;UBERON:0004535!6.21e-09!110;UBERON:0001009!2.91e-08!113;UBERON:0002067!6.09e-08!9;UBERON:0004016!6.09e-08!9;UBERON:0010083!6.09e-08!9;UBERON:0003914!3.82e-07!118;UBERON:0000947!5.69e-07!21;UBERON:0010191!5.69e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;1.34e-14;41!UBERON:0002199;2.04e-13;46!UBERON:0002416;2.04e-13;46!UBERON:0003102;4.46e-13;50!UBERON:0002067;9.17e-12;9!UBERON:0004573;6.77e-09;33!UBERON:0004571;6.77e-09;33!UBERON:0001013;2.81e-08;14!UBERON:0001758;4.40e-08;6!UBERON:0003672;4.40e-08;6!UBERON:0002073;1.51e-07;5!UBERON:0003688;3.21e-07;6!UBERON:0002358;3.21e-07;6!UBERON:0003684;3.21e-07;6!UBERON:0001178;3.21e-07;6!UBERON:0002384;6.51e-07;198!UBERON:0003129;8.50e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,5.70e-23,99;UBERON:0002199,2.02e-22,46;UBERON:0002416,2.02e-22,46;UBERON:0002097,6.91e-19,41;UBERON:0007524,1.18e-16,73;UBERON:0002329,2.38e-16,71;UBERON:0003059,2.38e-16,71;UBERON:0007282,2.38e-16,71;UBERON:0004290,2.38e-16,71;UBERON:0009618,2.38e-16,71;UBERON:0003077,5.70e-16,72;UBERON:0007285,5.70e-16,72;UBERON:0007503,6.49e-14,78;UBERON:0000486,2.78e-13,83;UBERON:0002067,7.43e-12,9;UBERON:0004016,7.43e-12,9;UBERON:0010083,7.43e-12,9;UBERON:0005256,6.86e-10,122;UBERON:0001134,1.07e-09,62;UBERON:0002036,1.07e-09,62;UBERON:0003082,1.07e-09,62;UBERON:0002384,2.85e-09,371;UBERON:0002385,3.67e-09,64;UBERON:0001015,3.67e-09,64;UBERON:0000383,3.67e-09,64;UBERON:0004573,7.11e-09,33;UBERON:0004571,7.11e-09,33;UBERON:0002100,2.28e-08,199;UBERON:0000490,2.43e-08,148;UBERON:0001013,2.79e-08,14;UBERON:0001758,3.80e-08,6;UBERON:0003672,3.80e-08,6;UBERON:0001637,1.26e-07,42;UBERON:0003509,1.26e-07,42;UBERON:0004572,1.26e-07,42;UBERON:0002073,1.59e-07,5;UBERON:0005086,1.59e-07,5;UBERON:0003688,3.43e-07,6;UBERON:0002358,3.43e-07,6;UBERON:0003684,3.43e-07,6;UBERON:0001178,3.43e-07,6;UBERON:0003129,7.53e-07,7 | |||
|phase1_expression=9.08391896352783,6.63711624062048,8.3163098416623,5.00366491765652,0.893922188854576,0.872338524100369,2.53299878168311,6.94891860769514,0,0.491467873003018,0,0,0,0,0.331397375727916,1.34465029290355,0,0.730310090387373,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.895037932904712,0,0.50133791063589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.58391129576717,1.72046919021225,0.347140501607594,0.56530794192401,0.419499436209906,0,0.208994966536811,0.775250277507987,0.71153252537342,0,0.805658634218294,0,0.732186172644509,1.10298924103761,0,0.535798369704479,0.22452937262617,0.450445921933289,3.06633274931766,0.949265659568129,0.183201743930407,0,0,0,2.48485975847659,0.506522046658319,8.474187572046,2.29469296599051,0.354668382198357,0.560677600142307,0,0,3.42332138939743,0.269421344139376,0.653847612453835,0.302714855289863,0,0.468642863667593,4.05808099879417,3.99330275081114,3.28787097213962,3.64046945795671,2.75184005425824,3.93262258766296,10.6160169052544,0.61417158655884,3.82305390350332,11.8800285728205,5.93440630268536,1.82032272387605,0.718618141816238,1.68336113954066,1.25118519871964,13.576141658725,1.31693286264251,3.67785354958824,3.30523729594513,0.113432183160021,5.02290979928813,7.04739383101272,15.6829606858076,4.50136644126603,8.65641245602887,9.27505944164265,3.90845398296339,5.56961896396179,4.38466523225394,6.31084435610286,19.3304787148829,0.969876340912871,5.32514388774922,1.20902517873168,0.67824236924195,0.57978255948989,0.545492241181669,0.286804595389004,0,0,0,0,0,0,3.12899064659632,1.28648187638577,1.38134921352481,19.5034529773431,9.38443326170461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.439001141634502,0,0,0,1.95484983186195,1.03993478527958,0,0.231860809950154,0.352226082707465,1.87676382089396,0.462985512576611,1.14152491340759,0,0,0,0,0,0,0,0.283550194484773,1.34337784054272,3.19697332365358,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0.300343057843917,0,0.112131084345361,0,0.22001485746285,1.16344544182,3.57656445851882,3.381211010224,0.531876233169741,0,0,0,0,1.14382394926518,0,0,3.90883421152482,0.710783897485092,0.791951872933429,0,0.871533458600294,0.099972991182057,0,0,0,1.4377491329495,0,0,5.35690834670043,4.72595541865882,7.52056045607561,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0.831883446123229,3.21172179834891,5.04647728108591,1.63997980989798,0.902838299183157,0,0,0,0,6.69003831404238,0.195801157462741,0,0,0,0,0,0,0,10.6686357362074,16.7273550883988,5.89386198309454,6.66323576129645,12.2809739776009,4.50390979202101,0,5.5515489768956,1.9531789784444,7.71995266529806,8.82732529612156,2.90525946149898,0,0.40101294060657,0,1.7222167224691,2.54927635209404,1.18011973463482,0,0,0,0,0,0,0.510281115829547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6068392984416,0.96670718292122,1.07834031980251,0.460511024178389,1.51620229732984,1.82614416276065,1.0151168573996,1.02271952899321,0.534192213880424,0,0,0.510450849978337,0,0.464845549297286,1.88887408098384,2.0911118104818,4.00443654228915,0.532306030317022,4.34966496037536,2.40921484835096,1.14499909393593,0,0,0.190630193923825,0,0,1.59101623962968,0,3.41757669408298,1.09814811894422,0.706874414074119,2.42618977887979,0,1.26377536871694,0.48763373908959,5.11798328225697,0,1.09199929126389,1.1312434556297,1.13008116620243,0.551365343546124,3.3171948762061,2.19225442626881,0.578775534266688,0.655894752046633,1.42037263873893,0.6196469961995,0,1.14729081763241,0.491245205065606,0,2.12856638442359,0.211107635297664,0,0.379473173765715,0.349934720244983,0.769776901804097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.970884173996107,0,0.284136146806413,0,0,0,0,0.140669416410513,0.890469640183247,0,0,0,0,0,0.102268682502155,0,3.11039587661807,0.269605053441981,0.716084698702437,0,0,0,0,0,0.0927680981618513,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13942055847001,0,0,0,0,0.641183153813036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.323967823502,0.313932918407225,0,0,0.138674673013139,0,0.0979923974143777,0,0,4.1276647793188,0,0,0.0821154570532092,0,0,0,0.274083849293502,0.794858446811959,0.0633107959558787,0,0.561111741760736,0,0,0,0,0,0,1.24252535565433,0,0.271808412147228,0.104602846312333,0.917983958726896,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80149941771202,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0.211200673038813,0,0,0,0,0.76280561296425,0.542999601753713,0,0,0,0,5.79319274070434,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19403842309499,1.16856654923612,3.88364103051829,0.189403005275089,0.251567901752575,0.889811221596536,2.51724075236616,0.907385542579434,2.33155800874171,3.40066844976158,1.27437413730962,2.69881867298163,1.39736661188633,1.24411862352257,0.53168342911599,1.56523518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| |||
|short_description=p@chr12:78334695..78334719,+ | |||
}} |
Revision as of 14:50, 11 January 2014
Short description: | p@chr12:78334695..78334719, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:78334695..78334719, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.86e-37 | 76 |
skin fibroblast | 2.69e-23 | 23 |
multi fate stem cell | 9.54e-19 | 427 |
somatic stem cell | 4.80e-18 | 433 |
stem cell | 3.84e-17 | 441 |
preadipocyte | 3.27e-15 | 12 |
muscle precursor cell | 6.93e-11 | 58 |
myoblast | 6.93e-11 | 58 |
multi-potent skeletal muscle stem cell | 6.93e-11 | 58 |
mesenchymal stem cell of adipose | 4.62e-10 | 8 |
mesenchymal cell | 2.69e-09 | 354 |
fibroblast of dermis | 5.00e-09 | 6 |
connective tissue cell | 1.06e-08 | 361 |
muscle cell | 1.51e-08 | 55 |
fibroblast of periodontium | 3.80e-08 | 6 |
motile cell | 6.62e-08 | 386 |
smooth muscle cell | 7.77e-08 | 43 |
smooth muscle myoblast | 7.77e-08 | 43 |
hair follicle cell | 1.59e-07 | 5 |
electrically responsive cell | 4.25e-07 | 61 |
electrically active cell | 4.25e-07 | 61 |
vascular associated smooth muscle cell | 9.95e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 7.64e-09 | 5 |
myotonic disease | 7.64e-09 | 5 |
muscle tissue disease | 7.64e-09 | 5 |
myopathy | 7.64e-09 | 5 |
muscular disease | 7.64e-09 | 5 |
myotonic dystrophy | 7.64e-09 | 5 |