FFCP PHASE1:Hg19::chr14:68286516..68286551,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5890 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9822 | |||
|TSSclassifier=strong | |||
|UniProt=O15315 | |||
|association_with_transcript=0bp_to_ENST00000471583,ENST00000487270,ENST00000488612_5end | |||
|description=CAGE_peak_1_at_RAD51B_5end | |||
|id=chr14:68286516..68286551,+ | |||
|ontology_enrichment_celltype=CL:0000542!7.33e-16!53;CL:0000051!7.33e-16!53;CL:0000838!1.34e-15!52;CL:0000037!2.15e-10!172;CL:0000566!2.15e-10!172;CL:0000988!4.52e-10!182;CL:0000945!1.50e-09!24;CL:0000826!1.50e-09!24;CL:0002032!3.66e-09!165;CL:0000837!3.66e-09!165;CL:0002031!4.66e-09!124;CL:0002087!1.79e-08!119;CL:0000738!6.34e-08!140 | |||
|ontology_enrichment_celltype_v019=CL:0000542;2.42e-09;53!CL:0000945;5.11e-09;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,2.65e-16,53;CL:0000051,2.65e-16,53;CL:0000838,4.94e-16,52;CL:0000037,7.21e-11,168;CL:0000988,1.05e-10,177;CL:0002031,1.35e-09,120;CL:0000945,1.39e-09,24;CL:0000826,1.39e-09,24;CL:0002032,1.42e-09,161;CL:0000837,1.42e-09,161;CL:0002087,5.21e-09,115;CL:0000738,2.20e-08,136 | |||
|ontology_enrichment_development_v019=CL:0000051;2.42e-09;53 | |||
|ontology_enrichment_disease=DOID:2531!5.96e-07!51;DOID:0060083!5.96e-07!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:2531,4.50e-07,51;DOID:0060083,4.50e-07,51 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p1@RAD51B | |||
}} |
Revision as of 20:42, 11 January 2014
Short description: | p1@RAD51B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RAD51B_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000471583, ENST00000487270, ENST00000488612_5end |
EntrezGene: | RAD51B |
HGNC: | 9822 |
UniProt: | O15315 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 2.65e-16 | 53 |
common lymphoid progenitor | 2.65e-16 | 53 |
lymphoid lineage restricted progenitor cell | 4.94e-16 | 52 |
hematopoietic stem cell | 7.21e-11 | 168 |
hematopoietic cell | 1.05e-10 | 177 |
hematopoietic lineage restricted progenitor cell | 1.35e-09 | 120 |
lymphocyte of B lineage | 1.39e-09 | 24 |
pro-B cell | 1.39e-09 | 24 |
hematopoietic oligopotent progenitor cell | 1.42e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.42e-09 | 161 |
nongranular leukocyte | 5.21e-09 | 115 |
leukocyte | 2.20e-08 | 136 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 4.50e-07 | 51 |
immune system cancer | 4.50e-07 | 51 |