FFCP PHASE1:Hg19::chr15:78832757..78832806,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5685 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9533 | |||
|TSSclassifier=strong | |||
|UniProt=Q567Q5 | |||
|association_with_transcript=0bp_to_ENST00000413382,ENST00000558635,ENST00000558639,ENST00000559082,ENST00000559146,ENST00000559934,ENST00000559948,ENST00000560033,ENST00000560099,uc002bdw.3_5end | |||
|description=CAGE_peak_1_at_PSMA4_5end | |||
|id=chr15:78832757..78832806,+ | |||
|ontology_enrichment_celltype=CL:0000012!1.43e-22!682;CL:0000548!2.89e-22!679;CL:0000004!2.89e-22!679;CL:0000255!2.89e-22!679;CL:0000003!3.00e-17!722;CL:0000063!1.10e-14!578;CL:0000144!2.22e-11!625;CL:0000034!2.09e-10!444;CL:0000048!4.30e-09!430;CL:0000723!5.59e-09!436;CL:0000219!1.44e-08!390;CL:0000134!4.71e-08!358;CL:0002320!1.29e-07!365;CL:0002371!4.47e-07!591 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000034,1.03e-09,441;CL:0000048,1.86e-08,427;CL:0000723,2.40e-08,433;CL:0000219,5.52e-08,386;CL:0000134,1.72e-07,354;CL:0002320,4.50e-07,361 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!1.81e-26!239;DOID:162!3.40e-26!235;DOID:0050686!2.01e-14!137;DOID:2531!7.08e-13!51;DOID:0060083!7.08e-13!51;DOID:1240!2.47e-10!39;DOID:305!1.08e-09!106;DOID:0050687!1.66e-09!143;DOID:8692!5.43e-08!31 | |||
|ontology_enrichment_disease_v019=DOID:1240;1.13e-08;39!DOID:2531;3.68e-08;51!DOID:0060083;3.68e-08;51!DOID:8692;1.12e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:14566,1.81e-26,239;DOID:162,3.40e-26,235;DOID:0050686,2.01e-14,137;DOID:2531,7.08e-13,51;DOID:0060083,7.08e-13,51;DOID:1240,2.47e-10,39;DOID:305,1.08e-09,106;DOID:0050687,1.66e-09,143;DOID:8692,5.43e-08,31 | |||
|ontology_enrichment_uberon=UBERON:0002384!1.98e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,6.79e-07,371 | |||
|phase1_expression=110.278776217228,92.4914263209047,99.0909460794677,97.0710994025365,109.058507040258,131.723117139156,91.1879561405918,75.1746649377929,54.0654250373666,56.2730714588455,12.5604210235037,39.7563297276914,16.881086606621,127.355577195888,71.2504357815019,157.996409416167,121.744294660843,124.152715365853,111.736610923026,74.4882401364567,22.6440767281121,18.4938285672072,127.37501427332,121.133866189503,111.481863960185,165.740677067306,175.695261422884,179.145738269934,45.6302561144729,56.4229215202903,58.2108623668446,149.865659590065,16.867531451582,55.4631015250182,162.061383613991,176.716355981865,148.855422742768,48.1976005422733,36.9001783345061,31.2495653830827,64.0398256326184,80.6495228387259,65.9393453143518,82.1500049104541,74.4415609066955,69.3790414997154,84.3717403967635,81.0000739402997,75.5683544984053,124.858498267813,105.025889676931,180.672423634879,76.1887954427927,78.103646713643,82.6101568225485,72.2850583843602,83.236375767643,138.654389902617,99.7833489129142,102.69728866435,79.9171407248802,126.003196671326,98.9339741803294,113.802008392229,127.401855757948,85.107783703671,88.4407593573716,126.378078624142,94.3884082340565,129.44455144425,146.506679637275,137.735835859349,175.636625029691,300.827527708205,233.864729961548,284.297123309358,130.413540761081,144.920701592054,135.813120759033,193.808665744049,236.909762544116,259.38309834578,93.278009564501,104.312474751067,109.409638225217,107.962746309326,102.501372681219,103.455439191807,104.445089900008,113.532396789708,34.7219911156764,35.8214685516273,32.8754976187697,56.8336712889811,90.2418786400273,164.878437069198,31.6702729883271,33.7989255964282,35.3634578279156,133.916382807933,56.7104743942447,48.2916761849428,37.0170783975031,142.048332528596,88.3817722424512,103.234794875967,96.6769793641106,104.394425576425,101.966528486945,91.7563507688513,90.6428058337583,135.627844124005,50.1208583487764,54.8458697583912,42.8595647600405,135.178045838196,72.0454527971612,82.4705869158312,92.8582269711575,84.4198347958856,81.3854317320523,88.3920401336988,107.661210140608,99.8295567004463,78.7063577279779,84.766256231758,97.7142316336045,38.9101014423734,30.7556225151033,32.0061932580986,36.5710299470943,145.542086555689,121.469433751354,161.201861963517,58.6565355443991,81.2588971370221,104.977745010745,52.5565659926847,172.147902055768,147.450049312605,116.732430186165,43.0921158387475,18.9433549912122,25.9549109949101,89.2505332550379,102.21415579467,67.1437700620269,55.3298248388393,76.6473180445371,62.0334027220373,65.7903568383794,56.7754832770042,59.013885273291,45.7899432958448,55.3739255797076,80.3344682464997,64.9974345929481,108.793455610287,114.912502847807,84.0148738039322,87.4139618126849,136.088706923614,34.9008742293882,171.698658521521,75.3432011530036,185.475535646034,92.0570427767296,89.6387384647245,39.8623257411296,75.9412527654503,70.8990749010676,100.153117251408,62.0448422637321,19.1881382942715,95.4186147255012,128.150077804555,125.259085049305,134.526375131194,119.168576418648,95.3151920241922,70.4543371816053,86.333641946006,113.280816885515,136.596621478664,149.077255639474,35.5689954965589,66.8364072396799,27.649928956388,74.6062583624466,61.0404849052561,83.0934663868014,145.618778318268,143.419428710165,152.950928498749,124.942352807995,116.815435763491,88.9634975923341,141.372340016564,85.0598236718236,13.6524204290704,7.18618141816238,151.839174786568,125.869230991196,103.3449150756,86.9175689344059,113.706972241436,52.4330825584023,201.795853841677,142.255981101268,111.476956963292,112.111975713408,103.831519245203,125.208823024703,131.911956503362,115.764684638249,95.1898513840742,150.735046984374,115.614668603804,95.1795951961375,174.577741364317,79.167139131205,148.710096983997,166.338941056588,143.206292194003,133.372852968918,115.869056537158,204.549905179331,280.830579073227,245.401607340423,170.107791280223,178.895483270821,221.906234318105,73.5312801950135,58.5349253755526,41.4404764057442,91.0161138942679,85.9036583186807,207.746740869966,186.117497846224,179.794228293078,194.999743790873,180.839938596697,182.223835477322,201.572805699446,215.647390172755,240.466973091494,43.5511718228542,21.0362660705169,24.2828666685526,23.5213938216867,92.5311754199365,141.527119201578,79.7566374019896,173.494998069958,107.368906848138,183.405989209124,71.1181849447894,48.3327539007764,132.798772555764,103.976823913029,52.7809454602726,16.6389565644733,150.104595706284,139.348346780042,115.882381210756,175.693966925227,138.895653772983,187.971102407783,86.9224837755203,97.8674224788155,92.0851602766866,129.170354356859,75.9505239295401,234.334584966942,205.778107043603,243.00251667345,132.815289168324,168.567684338098,38.3382679165211,127.107115377153,88.2245308812525,54.9419506183046,58.5127010872863,45.5735184669232,84.515697302877,27.503166640196,17.582617081507,39.3466625852222,128.225883401044,92.2053187580827,67.1692116681859,63.5783248238195,71.0614912198247,171.831603678486,112.078577561993,10.7296933755565,165.679339500976,117.278709413928,102.967362542252,37.5522766422727,32.625300365354,21.313774321288,126.106590406486,30.3868099019208,45.2782185229423,180.783582283023,129.362669342287,150.470855857352,154.336961054508,150.775288337851,85.9767724165691,77.8392196103619,78.3521062634117,132.82538187431,150.484409248714,127.496748775866,52.7756548650658,153.902528987637,104.176495533044,123.910186562008,119.594848641094,40.7853673617989,34.5004119775228,34.9093058680916,123.74408199634,117.12586847186,156.977628993872,104.530149568634,168.415830436435,71.9046742989295,41.8826042885635,66.3064821497657,103.306236027516,81.5277949327274,126.138236020377,89.4274704582471,117.763132606127,105.187510827634,75.0876470103291,46.044753258341,29.562975527278,51.7365356462525,152.107662064615,45.7235537983424,126.676309894465,17.6221041716467,16.8140277667319,63.4777840197264,54.3599786062914,34.8999114017263,48.8035390028478,98.1969093111933,50.4991789860566,119.339855560832,103.279908022866,75.4975654024968,92.5164657626161,79.314623605339,65.9501076688791,96.4717431892441,115.348850964386,117.368300431977,149.882059725202,158.891855330188,140.382137179631,87.7439604035177,86.4182887007158,61.9705055538582,161.773557463931,112.350250660144,108.964388831281,22.1087810324632,138.396560776633,14.1182958451834,27.7664526841195,160.966234061635,19.3346752920524,53.5795171621024,158.266366502868,16.9649977959318,27.3655901919291,16.0540727633553,50.2106257898725,34.9051923750064,29.5514676233275,185.932375395753,193.723669209451,141.560469064247,42.9699185866614,108.025627028549,77.177717724144,109.150802063465,158.253220847688,64.8920057935675,78.0072295243825,93.1966793096125,77.2399039154054,165.448214781128,150.740608581059,174.914610482869,120.955195721676,95.2759679016481,118.46501210838,108.530051453373,105.451776000304,68.6118540493429,50.2794087228662,41.2723745890644,123.184070563781,92.8696423150388,57.1570561531692,55.7540780118721,35.6645040312405,67.8547733818557,43.1805430512134,74.5680659925774,145.51392241963,130.031943559396,93.599425216598,12.5389917742554,88.1554315349876,42.3210319741496,36.8925860893638,133.645235984403,129.032403975946,120.522087599637,42.256138648823,53.8935091988228,63.6100268920861,32.6714605190026,149.88379612324,38.034052832432,187.414378363164,113.548561858831,44.0731654818947,55.1365343546124,63.6901416231571,46.9142447221526,30.0963277818678,101.007791815181,58.0323678113334,51.7405241826583,51.5502952634002,166.500579908904,141.96986426396,43.1571972292313,195.473346302899,101.542772578176,88.9096210991735,42.5009954617601,27.2949081791087,102.380327939945,30.1636023991104,28.3116560639439,74.5618902152091,15.9286987888355,11.7930032967338,15.076625220247,91.2001898821629,91.3405696617905,92.5211020642274,65.5094265250287,65.2755064754342,91.3224246251351,102.458783168449,91.2653128932414,58.691263045776,152.544773570032,44.2740733421145,62.9753355071252,224.450235551868,166.342402561841,157.365757486692,226.544733547657,309.747184463731,162.588059242379,153.463347474815,175.29584774826,128.885904754078,98.3691466633059,203.370504713384,110.27916991963,212.291889363211,152.076907123203,136.416602061148,110.720021799485,175.874736514952,158.843475147473,150.534020611596,162.010516602263,283.117350237556,153.958614164069,77.5450613370588,243.951021985337,88.9302154554179,69.0836324930463,86.4589296685975,67.9797951821588,148.059836534406,113.895138731583,103.993829731147,71.623345421307,99.7801327597666,53.1388014631671,88.4791406512005,32.0726269415969,137.021015883197,115.362711958732,62.7042462140141,30.2856942141626,51.3888082887935,126.974104918555,185.413121376407,86.5286182391318,105.131380629691,133.184896400338,242.752712860126,88.5020200492488,66.3870119936563,71.8449277040819,75.5731532983531,31.018647875047,52.7850478540934,39.9227596002388,60.6796683328593,45.566659998018,53.6499685821747,184.800560015651,124.584288643455,177.054373644184,125.486587859893,97.3959408700069,82.4718725933138,54.0302245346442,30.5108989722282,50.3519729846375,31.2939305605366,41.6722142724502,46.9484749909501,88.131216986863,166.053679435817,56.4045394832833,129.55211749804,104.676012592179,108.696507380234,89.7427292075787,78.1552841343203,124.93911740014,68.2284513303852,254.461312507384,122.758560500909,78.1194904930735,212.962303622619,200.37591007273,202.22501230589,140.228008483173,166.406598192456,136.304749685105,169.598887677354,151.106433362883,109.70904034924,45.7820488296112,62.7164132328675,55.6037431889599,161.604015130939,175.584357242981,185.348960372183,29.3868939795752,66.6139447257995,65.1255159116443,181.724970058803,102.723924939347,81.3314271439211,37.4855182706921,75.0142439501716,47.7473508143565,65.903602552513,171.819668390765,290.119559529498,84.4110418338125,107.572385659537,97.0052717878326,59.7362148864794,74.5677010598057,117.041424023089,184.494001850244,147.870527698296,133.98411892724,53.2916338138192,153.927499062097,235.311397695055,184.623614959705,195.270556872532,80.4038946688997,76.7828302216052,67.3422607525987,110.044665491341,117.042906293061,48.7493128860266,143.925817692815,97.3128077853619,39.0618980373015,105.699283468947,94.5233136530935,173.981089576026,66.2356691747183,248.638581327546,133.819980803971,151.551264258599,127.47814529705,116.632173638252,169.623035929203,180.594118688449,56.4395071387202,27.6548865361826,3.83239764200917,104.43300226505,108.046702608798,45.2437490061052,63.4774374512364,39.4830163517248,58.5059471462044,60.9500988353931,64.2733797432593,58.5168045359386,61.611280085751,69.8975697164723,103.048402457849,117.2777664764,114.316410376698,296.463574322423,222.098150008553,71.5706720828373,28.0579016589846,204.317251699039,169.723664760987,239.70907504284,76.4911231275101,39.4638996824554,38.8797162611358,100.965840967379,86.5286666145196,29.5843877081389,60.9313941716975,155.979985219575,56.6149832092364,55.7462354571226,92.6928758511604,76.7890983717345,119.459912385817,101.113914470548,95.3635091519475,88.6003417562407,138.161712421137,123.701703816216,109.912728774522,104.345190378795,50.3526177866441,40.7241312538884,40.9921065402339,176.561616696628,69.7766872093505,55.3158797100658,92.1217227884042,76.219986183884,45.6472740066995,90.9013506730544,487.779356515488,78.5159747057324,63.106065190859,93.5073304704672,54.5295126638962,67.2138892955099,68.3185318688519,82.4043407369297,80.5373348352957,32.800023845103,71.6761494612589,38.7142389863615,38.0650950030681,95.1838608361268,85.2366382301567,102.666452575696,94.4890254033842,161.862883952342,106.780358523969,77.5327503067915,192.538695724068,196.319180271669,208.607003924983,127.468222550135,109.935173065875,131.692060796287,165.680209519373,120.531046239302,191.964942719734,178.165455737509,155.632941518937,136.290342985572,155.418219833136,122.753037520893,149.934727010709,103.827267300535,122.760466550727,109.671901104613,241.274344790364,134.022461832286,143.070861980595,76.5655703799515,99.1258762859554,190.413215979661,155.901650152988,124.934060332156,50.4739592914604,111.141642145014,131.02381233008,85.084139180659,145.318498253367,122.706911391632,166.910432473411,122.138589617574,160.885553970867,155.910959250461,86.7543706594276,277.217472995305,205.434007834136,181.418995160266,151.989350361727,206.62477020062,29.1725300280152,148.093834717935,104.963223847557,103.209763775438,157.907947143971,173.269900671372,60.0126430338501,106.793269386533,216.370827819718,98.3347533863257,120.880898109736,131.267542529562,65.8832481358584,67.1843440835611,85.3055456595357,118.93076697054,131.317061449674,89.9887418702195,98.7843324332427,82.6916439195546,147.111752175436,67.0373901567893,76.3210441568205,100.391001386596,124.088465984248,114.972357643163,180.072340683682,38.023701257104,72.2652539260483,30.1707993618016,52.714905609874,53.9433429914477,21.4387482639075,43.4369486749679,31.409272457014,128.769806673346,174.35925110796,131.885162337087,57.9938844074698,69.0301592795573,49.7059146763272,128.897711931346,49.1875547404142,74.8325804890059,34.3866164942561,93.2387832353864,135.93069153338,102.612123834629,36.8079836170251,61.7051697904939,32.6565138471871,34.054290074128,71.6536999813868,33.9919815451453,73.9354655800048,83.7147123151794,101.571129973478,51.9630780801938,57.1682327772001,57.66173240248,43.7111407394491,82.759311361742,172.735747346113,63.2790754824074,55.5312718420715,33.9387511584301,190.764859186725,101.776732731243,60.1257091234937,42.1069780974885,54.6530718461889,64.8342691561742,181.379176623642,106.060874710925,33.0936399537919,96.2302895452305,127.516843628833,79.1055138976736,25.6547636713681,100.499839619073,77.6769070777472,31.7979444434482,46.0343273937697,118.213668729835,103.875140401413,37.6814474669927,67.8156330890388,134.629571378315,226.462728537652,54.921017012716,157.236674251619,129.720672181135,73.1594586022321,92.2938633637661,51.0318349788808,77.7137588894623,87.4933593348275,111.412434090366,203.115515048087,163.207088546297,107.961587444011,59.0264718345694,76.0165457363255,89.1723006856146,139.684237019372,44.8621428809647,58.9191367754065,65.9596449506216,45.7451456503712,65.511637775427,49.4487903741547,72.1796490085275,38.4813591202256,171.399082411253,104.45405408431,51.522651270491,75.346643321129,30.6741283063537,42.2030940732178,36.2649145373172,188.852559945242,25.2248428608294,53.6711349118664,97.8699654953491,93.7427445780213,59.620656093453,131.951101447756,130.708416129142,312.062473528314,86.6617746918229,94.0337010221072,106.886962106224,96.8572241097265,154.185136664811,71.231976325145,52.2530053804548,54.7251830042794,36.3049815475252,71.4333839368286,66.1819119469198,82.0279154917278,68.9650075826981,90.0418856522326,63.7744525947212,56.188578530385,122.574529065989,108.145723142949,48.6955343295468,80.9026476829389,74.515919866307,147.339916185864,78.4445992201209,42.4759021031268,62.4285154640779,58.6602356008636,49.2633020056952,91.9585362993569,30.6248116125336,44.8840559707988,178.556650212901 | |||
|short_description=p1@PSMA4 | |||
}} |
Revision as of 00:44, 12 January 2014
Short description: | p1@PSMA4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PSMA4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000413382, ENST00000558635, ENST00000558639, ENST00000559082, ENST00000559146, ENST00000559934, ENST00000559948, ENST00000560033, ENST00000560099, uc002bdw.3_5end |
EntrezGene: | PSMA4 |
HGNC: | 9533 |
UniProt: | Q567Q5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stem cell | 1.03e-09 | 441 |
multi fate stem cell | 1.86e-08 | 427 |
somatic stem cell | 2.40e-08 | 433 |
motile cell | 5.52e-08 | 386 |
mesenchymal cell | 1.72e-07 | 354 |
connective tissue cell | 4.50e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 6.79e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 1.81e-26 | 239 |
cancer | 3.40e-26 | 235 |
organ system cancer | 2.01e-14 | 137 |
hematologic cancer | 7.08e-13 | 51 |
immune system cancer | 7.08e-13 | 51 |
leukemia | 2.47e-10 | 39 |
carcinoma | 1.08e-09 | 106 |
cell type cancer | 1.66e-09 | 143 |
myeloid leukemia | 5.43e-08 | 31 |