FFCP PHASE1:Hg19::chr15:80843484..80843499,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9915 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16876 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=39bp_to_ENST00000558849_5end | |||
|coexpression_cluster_id=C1321 | |||
|description=CAGE_peak_5_at_ARNT2_5end | |||
|id=chr15:80843484..80843499,+ | |||
|ontology_enrichment_celltype=CL:0000055!4.87e-40!180;CL:0000057!2.07e-26!75;CL:0000680!4.80e-26!57;CL:0000056!4.80e-26!57;CL:0000355!4.80e-26!57;CL:0000187!5.75e-26!54;CL:0000183!1.16e-25!59;CL:0000393!1.05e-21!60;CL:0000211!1.05e-21!60;CL:0000192!2.03e-19!42;CL:0000514!2.03e-19!42;CL:0002620!1.49e-13!23;CL:0000359!1.86e-13!32;CL:0000048!1.45e-12!430;CL:0000723!7.71e-12!436;CL:0000222!8.14e-12!119;CL:0000034!6.50e-11!444;CL:0002494!6.83e-10!16;CL:0002371!1.24e-07!591;CL:0000144!1.53e-07!625 | |||
|ontology_enrichment_celltype_v019=CL:0002620;5.08e-13;23!CL:0000187;2.27e-09;55!CL:0000192;2.50e-09;43!CL:1000306;7.14e-09;4!CL:0002547;7.14e-09;4!CL:0000393;2.13e-08;61!CL:0000211;2.13e-08;61!CL:0000359;4.72e-08;32!CL:0002494;5.06e-08;16!CL:0000708;6.78e-08;3!CL:0000057;1.97e-07;73!CL:0002590;2.00e-07;3!CL:0002559;5.95e-07;5!CL:0000346;8.48e-07;3!CL:1000428;8.48e-07;3!CL:0000746;9.27e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.17e-16,76;CL:0000187,6.14e-15,55;CL:0000680,8.31e-14,58;CL:0000056,8.31e-14,58;CL:0000355,8.31e-14,58;CL:0002620,5.50e-13,23;CL:0000393,8.60e-13,61;CL:0000211,8.60e-13,61;CL:0000192,2.05e-12,43;CL:0000514,2.05e-12,43;CL:1000306,4.97e-09,4;CL:0002547,4.97e-09,4;CL:0000359,4.64e-08,32;CL:0000048,6.12e-08,427;CL:0000708,6.85e-08,3;CL:0002494,1.07e-07,16;CL:0000723,1.38e-07,433;CL:0002590,1.90e-07,3;CL:0000034,3.94e-07,441;CL:0000222,4.08e-07,121;CL:0002559,7.23e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000514;2.50e-09;43!CL:0000355;3.17e-09;58!CL:0000513;9.27e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;4.50e-09;5!DOID:450;4.50e-09;5!DOID:66;4.50e-09;5!DOID:423;4.50e-09;5!DOID:0080000;4.50e-09;5!DOID:11722;4.50e-09;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,6.14e-09,5;DOID:450,6.14e-09,5;DOID:66,6.14e-09,5;DOID:423,6.14e-09,5;DOID:0080000,6.14e-09,5;DOID:11722,6.14e-09,5 | |||
|ontology_enrichment_uberon=UBERON:0000914!4.83e-27!83;UBERON:0002329!4.83e-27!83;UBERON:0003077!4.83e-27!83;UBERON:0003059!4.83e-27!83;UBERON:0007282!4.83e-27!83;UBERON:0009618!4.83e-27!83;UBERON:0007285!4.83e-27!83;UBERON:0004290!9.95e-27!70;UBERON:0001134!3.34e-23!61;UBERON:0002036!3.34e-23!61;UBERON:0003082!3.34e-23!61;UBERON:0002385!6.31e-22!63;UBERON:0001015!6.31e-22!63;UBERON:0000383!6.31e-22!63;UBERON:0000486!5.27e-20!82;UBERON:0005256!2.84e-16!143;UBERON:0000475!1.28e-14!365;UBERON:0000119!6.88e-13!312;UBERON:0000490!5.15e-12!138;UBERON:0000483!1.65e-11!309;UBERON:0002199!1.51e-09!45;UBERON:0002416!1.51e-09!45;UBERON:0000481!4.20e-09!347;UBERON:0004872!4.50e-09!84;UBERON:0002100!6.18e-09!216;UBERON:0002097!7.24e-09!40;UBERON:0004535!8.16e-09!110;UBERON:0004573!1.35e-08!33;UBERON:0004571!1.35e-08!33;UBERON:0001637!1.98e-08!42;UBERON:0003509!1.98e-08!42;UBERON:0004572!1.98e-08!42;UBERON:0001009!3.25e-08!113;UBERON:0002049!2.23e-07!79;UBERON:0007798!2.23e-07!79;UBERON:0003914!3.58e-07!118;UBERON:0001135!4.28e-07!15;UBERON:0000948!6.62e-07!24;UBERON:0005498!6.62e-07!24;UBERON:0004140!6.62e-07!24;UBERON:0009881!6.62e-07!24;UBERON:0004141!6.62e-07!24;UBERON:0003084!6.62e-07!24;UBERON:0007005!6.62e-07!24;UBERON:0004139!6.62e-07!24;UBERON:0004291!6.62e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0005284;8.01e-11;5!UBERON:0004797;7.14e-09;4!UBERON:0000415;7.14e-09;4!UBERON:0007240;7.14e-09;4!UBERON:0005742;7.14e-09;4!UBERON:0005734;7.14e-09;4!UBERON:0004664;7.14e-09;4!UBERON:0004663;7.14e-09;4!UBERON:0006876;2.30e-08;11!UBERON:0002097;3.42e-08;41!UBERON:0003210;6.78e-08;3!UBERON:0002073;5.95e-07;5!UBERON:0002199;6.69e-07;46!UBERON:0002416;6.69e-07;46!UBERON:0000412;8.48e-07;3!UBERON:0001992;8.48e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002329,8.76e-16,71;UBERON:0003059,8.76e-16,71;UBERON:0007282,8.76e-16,71;UBERON:0004290,8.76e-16,71;UBERON:0009618,8.76e-16,71;UBERON:0003077,1.90e-15,72;UBERON:0007285,1.90e-15,72;UBERON:0007524,4.02e-15,73;UBERON:0007503,1.26e-13,78;UBERON:0001134,1.78e-12,62;UBERON:0002036,1.78e-12,62;UBERON:0003082,1.78e-12,62;UBERON:0000486,2.56e-12,83;UBERON:0002385,7.08e-12,64;UBERON:0001015,7.08e-12,64;UBERON:0000383,7.08e-12,64;UBERON:0002199,2.20e-11,46;UBERON:0002416,2.20e-11,46;UBERON:0005284,5.71e-11,5;UBERON:0002097,1.19e-10,41;UBERON:0005256,3.16e-10,122;UBERON:0000490,4.11e-10,148;UBERON:0004535,4.66e-09,109;UBERON:0000415,4.97e-09,4;UBERON:0007240,4.97e-09,4;UBERON:0005742,4.97e-09,4;UBERON:0005734,4.97e-09,4;UBERON:0004664,4.97e-09,4;UBERON:0004663,4.97e-09,4;UBERON:0001009,1.32e-08,112;UBERON:0006876,2.23e-08,11;UBERON:0000119,4.71e-08,309;UBERON:0003210,6.85e-08,3;UBERON:0002049,1.01e-07,78;UBERON:0007798,1.01e-07,78;UBERON:0004872,2.42e-07,83;UBERON:0002073,7.23e-07,5;UBERON:0005086,7.23e-07,5 | |||
|phase1_expression=0.181678379270557,0,0,0,0,1.74467704820074,0,0,0.261185628199839,0.245733936501509,0.697801167972428,0,0,0,0,1.34465029290355,1.80808358407193,0.730310090387373,0.487932798790507,1.47745269692145,3.26401105990805,1.25381888591235,0,0.136874425072884,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,2.01210257911091,2.17366355134002,0.361439152384566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48485975847659,4.43206790826029,1.85372853138506,7.17091551872034,4.25602058638028,2.24271040056923,1.06748995729705,1.2333377420858,2.48968828319813,0.269421344139376,0.490385709340376,13.7735259156888,1.72852777344,0.468642863667593,0,1.1409436430889,0,0.469737994575059,0.485618833104395,1.12360645361799,0.204154171254893,0.982674538494144,0,0,0,3.64064544775211,0,1.0100166837244,0.875829639103749,0.554128230968366,2.63386572528503,0.612975591598039,0.300476117813194,1.36118619792025,3.22901344239952,1.06778694409284,1.27159140695737,1.20036438433761,1.8549455262919,3.86460810068444,2.97786970130544,0.843881661206331,0.779496041289589,4.54380793639406,1.65689817556139,14.0632069432366,1.77504796258307,0.503760491138201,2.20428770003634,0,0,0,0,0,0,0,0,0,3.12899064659632,1.28648187638577,4.14404764057442,4.17931135228781,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,0,0,0,0,0,0,1.20097467208968,0,0,0,0,0.325808305310325,0,1.44331342025273,0,1.40890433082986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,33.5271942192629,89.3718141108224,17.8945417403118,0.904902010304444,0,0,3.72313363218819,5.2003718455683,0.257207374262142,2.83698264046557,0.266422179016099,1.71573592389777,0,0.823240336780769,0.325736184293735,1.06617584622764,0,0,0,0,0,0,0,0.718874566474748,0,0,0.144781306667579,0,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0.271265023699736,1.87173775377726,0,0.473107245101804,0.117141414992713,0.601892199455438,0,0,0.664225598535437,0.737476674166813,1.99832313276591,9.00685324328607,19.5591751572188,0,0,0,0,0,0,0.496215615637554,0.306923946576125,0.280660094433074,1.40953064181271,0.511707249066704,0.482561763430822,0,2.00472601943452,1.06537035187876,0.246381468041427,0,0.929683027679674,0,0,0,0.459257792658427,0.364182336013434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0.103041011647722,0,0,0,0,3.21367859688319,0.096670718292122,0.462145851343933,0.614014698904518,0.689182862422653,2.90034661144339,0.725083469571143,0.596586391912706,2.1367688555217,0,0,0,0,0.929691098594572,1.5740617341532,0,0.616067160352178,1.06461206063404,0.869932992075073,0,0.143124886741991,16.0028098824657,9.17500331684305,2.47819252100972,2.81487570442467,0.42793898803392,2.54562598340749,1.56989728039846,0.899362287916574,2.47083326762449,1.53156123049392,1.01091240786658,0,0.421258456238981,2.43816869544795,0.243713489631284,1.05650146756755,2.45699840534374,0.565621727814851,0,1.10273068709225,0.66343897524122,0,0.578775534266688,6.55894752046633,0,0.30982349809975,1.97186921772569,1.86434757865267,0.687743287091848,0.35667105148125,0,0,0,2.27683904259429,0.699869440489966,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.00355669041231,0,0,0,0,0,0,0.492339221844278,0,1.61763032065188,0,0,0,0,1.11136990144637,1.93866549219044,0.185536196323703,1.99613798001194,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591095237907095,0.658156191461918,0,0,0.0769502585037971,0.683652335082007,0,0,0,0,2.74792780205587,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404406797884062,0,0,0,0,0,0,0,3.0607276163049,0,0,0,0,0,0,0,0,0,0,0,0.957651272384428,0,0,0,0,0,0,0,0.225980740780532,0,0,0.569797163602908,0,1.52301758477914,0,0,0,0,0,0,0.124252535565433,0,0,0.104602846312333,0,0,0,0,0,8.59530882839914,0,0,0,0,0,0,0,0.0671834724867263,0.360299883542404,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.864221491201268,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0.427149650270779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18628920882415,0,0,0,0,0,0,0,0,0.934853239388898,1.66441758450784,0.189403005275089,0.50313580350515,0,0.228840068396924,1.20984739010591,0.15543720058278,0.295710299979268,2.07085797312813,0.449803112163605,1.70789252563885,0.829412415681711,0,0,0,0,0.406870733204662,0.909243296012797,0.537052785212442,2.32016879939247,1.19428766609585,0,0.343395705182793,0,0,0.192619830407303,0,0,3.62729480819636,3.70435958918134,0,0.179088841081487,0,4.60496504115285,0.530067437837643,0.771656153083659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.920529751259204,0,0,0,0,0,0,0,0,0,0,6.67809136372179,0,0,0.352675943690684,0.3062454773532,0.192687675289379,0,0,0.205116364240755,1.26035848110859,0.484100767249525,0,0,0,0,0,0,0,0,0,0.601682626794058,0.40341013740704,0,0,0,0,0.337687923091973,0,0,0.380494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| |||
|short_description=p5@ARNT2 | |||
}} |
Revision as of 00:51, 12 January 2014
Short description: | p5@ARNT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ARNT2_5end |
Coexpression cluster: | C1321_Meningeal_Pericytes_Smooth_Hepatic_spinal_Ciliary_corpus |
Association with transcript: | 39bp_to_ENST00000558849_5end |
EntrezGene: | ARNT2 |
HGNC: | 16876 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.17e-16 | 76 |
muscle cell | 6.14e-15 | 55 |
muscle precursor cell | 8.31e-14 | 58 |
myoblast | 8.31e-14 | 58 |
multi-potent skeletal muscle stem cell | 8.31e-14 | 58 |
skin fibroblast | 5.50e-13 | 23 |
electrically responsive cell | 8.60e-13 | 61 |
electrically active cell | 8.60e-13 | 61 |
smooth muscle cell | 2.05e-12 | 43 |
smooth muscle myoblast | 2.05e-12 | 43 |
fibroblast of tunica adventitia of artery | 4.97e-09 | 4 |
fibroblast of the aortic adventitia | 4.97e-09 | 4 |
vascular associated smooth muscle cell | 4.64e-08 | 32 |
multi fate stem cell | 6.12e-08 | 427 |
leptomeningeal cell | 6.85e-08 | 3 |
cardiocyte | 1.07e-07 | 16 |
somatic stem cell | 1.38e-07 | 433 |
smooth muscle cell of the brain vasculature | 1.90e-07 | 3 |
stem cell | 3.94e-07 | 441 |
mesodermal cell | 4.08e-07 | 121 |
hair follicle cell | 7.23e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 6.14e-09 | 5 |
myotonic disease | 6.14e-09 | 5 |
muscle tissue disease | 6.14e-09 | 5 |
myopathy | 6.14e-09 | 5 |
muscular disease | 6.14e-09 | 5 |
myotonic dystrophy | 6.14e-09 | 5 |