FFCP PHASE1:Hg19::chr16:4714726..4714753,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23295 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20254 | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=16bp_to_BC014199_5end | |||
|description=CAGE_peak_3_at_MGRN1_5end | |||
|id=chr16:4714726..4714753,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000182;1.96e-12;12!CL:0000097;1.06e-10;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.36e-12,12;CL:0000097,1.05e-10,5;CL:0002028,1.05e-10,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.51e-09!115;UBERON:0001049!1.57e-07!57;UBERON:0005068!1.57e-07!57;UBERON:0006241!1.57e-07!57;UBERON:0007135!1.57e-07!57;UBERON:0003080!3.16e-07!42;UBERON:0002780!6.71e-07!41;UBERON:0001890!6.71e-07!41;UBERON:0006240!6.71e-07!41 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;3.82e-12;19!UBERON:0006925;3.82e-12;19!UBERON:0002423;8.58e-09;25!UBERON:0002365;3.93e-08;31!UBERON:0002330;3.93e-08;31!UBERON:0002368;7.16e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.64e-12,19;UBERON:0006925,2.64e-12,19;UBERON:0008836,2.64e-12,19;UBERON:0008835,2.26e-10,22;UBERON:0003894,2.26e-10,22;UBERON:0009854,7.67e-10,23;UBERON:0007499,6.57e-09,25;UBERON:0009497,6.57e-09,25;UBERON:0000015,6.57e-09,25;UBERON:0002423,6.57e-09,25;UBERON:0006235,6.57e-09,25;UBERON:0004161,6.57e-09,25;UBERON:0009856,1.70e-08,26;UBERON:0002365,2.17e-08,31;UBERON:0002330,2.17e-08,31;UBERON:0002368,3.41e-07,35;UBERON:0005172,5.02e-07,54;UBERON:0005173,5.02e-07,54;UBERON:0002417,5.03e-07,60;UBERON:0000916,5.03e-07,60;UBERON:0004876,7.50e-07,11 | |||
|phase1_expression=0,0.428201047781966,0.140954404095971,1.0007329835313,0.893922188854576,0,0,0,0.261185628199839,0.245733936501509,0,0,0.263766978228454,0,0,0,0.602694528023977,0,0.487932798790507,0.123121058076788,0,0.313454721478088,0,0.410623275218653,0.376627918784408,0.382067028739756,0.328402357799783,0.157421562627358,0,0.767658796194425,0.619264493264304,0,0.90361775633475,0,0.309868802321207,0.142169232487422,0,0,4.01088894940283,1.95309783644267,0.671746422719773,0,0.257575567634187,0.436194716338694,0,0,0,0.411167888021826,0.309706370895104,0,0.256160706529101,0,0.344745680736619,0,0,0.941211697713023,0.272906150057846,0.224723484445085,0.306083892370903,0,0.639337125799041,0,0.398927315243264,1.27867425159808,1.45104619314292,0.56738522469114,0.622822248995575,1.25624332628372,1.5644487552606,0.434377689410233,0,0.368277635987565,0,0.845021145247767,0.425208599930087,0,0.561643155732475,0.300353785683013,0.16072558669708,0,0.59675003159727,0.547992461293902,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0.560508562981536,0,0.196709770113833,0.393010762749165,0.822405995998037,0,0,0,0,0.111410456885174,0.294605907474837,0.221533894583621,0,0.512365278902701,0,0.657751618414705,0.276350017785848,0.579606171470105,0,0,0,0.453237370790265,0.383220493601921,0,0.253019692019503,0,0,0,0.150575119077773,0,0,0,0,0.604820229674197,0.534880391567015,0.289648807765598,0,0,0.12786256184353,0.361439152384566,0,0.434539556882471,0,0,0.0945348171640679,0.443458794925128,0.43917392846563,0.196468613246569,0,0,1.62273696827342,0.696518949197069,1.19662164466979,0,0.571994910780128,0,0,0,0.347140501607594,0,0,0.275118041940067,0.208994966536811,0,0,0.33472061276467,0.402829317109147,0,0.24406205754817,0.735326160691737,1.62028389576352,0.0892997282840798,0,0.337834441449967,0,0.949265659568129,0.183201743930407,0,0,0,0,0.12663051166458,0.132409180813219,0.286836620748814,0,0.560677600142307,0,0.74000264525148,0,0.134710672069688,0.326923806226917,0.302714855289863,0,0.70296429550139,0,0,0.298897361103602,0.352303495931295,0.161872944368132,0.140450806702248,0.408308342509787,0.491337269247072,0.413303124703062,0,0.494533858557114,0,0,0,0,0,0,0,0,0,0.358779271377724,0,0.211931901159562,0.600182192168805,0,0.257640540045629,0,0.506328996723799,0,0.757301322732344,0.0920498986422993,0.161646056818812,0.355009592516614,0.10075209822764,0.339121184620975,0,0,0,0.853815942907168,0.397589304964456,0.232387885739037,0.310983165046111,0.504641701751257,0.36497735907583,0,0.643240938192885,0,0.928735856063958,0.721879481669586,0.354920400119532,0.337169380156203,0.482022059766964,0.330881918197182,0.653638332277218,0.237270619111097,0.134831308160164,0.196221465125346,0,0,1.40241773803446,0,1.47008711385542,3.80265104465493,9.82827216677626,1.77236972004421,0,0.860919069801795,0,0.109750285408626,0,0.201057944823262,0.277765335475589,0,0,1.44331342025273,0,0,0,0,0.570762456703795,0,0,0.984868024349589,0.234004265139238,0.297262324577456,0,0.16798212819886,0.141775097242386,0.0895585227028483,0.290633938513962,0.383382679165211,0.985326475791887,2.0251139823042,2.48793738648926,2.16179930125442,2.27236380167484,0.126995788584338,0.763976851116555,1.17217447210047,1.71072446022705,0,0.600686115687835,0.857479297891735,0.224262168690721,0,0.22001485746285,0.129271715757778,0,0,0.531876233169741,0,0.257207374262142,0,0.266422179016099,0,0.542621605391443,0,0,0,0,0,0,0.399891964728228,0,1.50677127429638,0,0.479249710983165,1.14861935834114,0,0.289562613335158,0.205476322550383,0,0.224170287987055,0.985153801009636,1.07813787429759,1.54011643535698,0,0,0,0,0,2.24702107184155,8.97484377612075,0,0.12269149171914,0,0.271265023699736,0.415941723061614,0.356857977594324,0.630809660135739,0.117141414992713,0.601892199455438,0,0,0,0.184369168541703,0.347534457872331,0.979005787313703,0,0.620304078368662,0.862856803274467,0.640365346820666,0,0,0,0.496215615637554,0.306923946576125,0,0.128139149255701,0.511707249066704,0,1.48418066444991,0.308419387605311,0,0.164254312027618,0,0.348631135379878,0.120859449591622,0.802025881213139,0.0920809889358963,0.114814448164607,0.364182336013434,0.655622074797121,0.451199612907412,0.15403067420883,0,0,0.316654886678627,3.4120015221269,0.680374821106063,0.215915916102139,1.54227252690289,0,1.50506932156456,0.254876273045038,0,0.223874754722178,0.219259876645935,0,0,0.328014645699706,0,7.93415789687461,0.27470839445503,0.082509499920588,0,0,1.6068392984416,0.096670718292122,0.308097234229289,0,0.275673144969061,0,0,0.0852266274161009,0.623224249527161,0.165284915360978,0.192190067365106,0.510450849978337,0.10115778085555,0,1.25924938732256,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0.318203247925937,0,0.179872457583315,0,0.235624804691373,0.404364963146632,0,0,0,0.487426979262569,0,0.409499734223957,0.424216295861138,0,0,0,0.438450885253763,0.578775534266688,0,0,0.30982349809975,0.563391205064483,0.143411352204052,0.294747123039363,0,0,0.211107635297664,0,0,0.349934720244983,0.0962221127255121,0,0,8.096366866803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| |||
|short_description=p3@MGRN1 | |||
}} |
Revision as of 02:07, 12 January 2014
Short description: | p3@MGRN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MGRN1_5end |
Coexpression cluster: | NA |
Association with transcript: | 16bp_to_BC014199_5end |
EntrezGene: | MGRN1 |
HGNC: | 20254 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.36e-12 | 12 |
mast cell | 1.05e-10 | 5 |
basophil mast progenitor cell | 1.05e-10 | 5 |
Ontology term | p-value | n |
---|---|---|
liver | 2.64e-12 | 19 |
digestive gland | 2.64e-12 | 19 |
liver bud | 2.64e-12 | 19 |
hepatic diverticulum | 2.26e-10 | 22 |
liver primordium | 2.26e-10 | 22 |
digestive tract diverticulum | 7.67e-10 | 23 |
epithelial sac | 6.57e-09 | 25 |
epithelium of foregut-midgut junction | 6.57e-09 | 25 |
anatomical boundary | 6.57e-09 | 25 |
hepatobiliary system | 6.57e-09 | 25 |
foregut-midgut junction | 6.57e-09 | 25 |
septum transversum | 6.57e-09 | 25 |
sac | 1.70e-08 | 26 |
exocrine gland | 2.17e-08 | 31 |
exocrine system | 2.17e-08 | 31 |
endocrine gland | 3.41e-07 | 35 |
abdomen element | 5.02e-07 | 54 |
abdominal segment element | 5.02e-07 | 54 |
abdominal segment of trunk | 5.03e-07 | 60 |
abdomen | 5.03e-07 | 60 |
urogenital ridge | 7.50e-07 | 11 |