FFCP PHASE1:Hg19::chr16:68002493..68002558,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6560 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10913 | |||
|TSSclassifier=strong | |||
|UniProt=Q9UP95 | |||
|association_with_transcript=0bp_to_ENST00000316341,ENST00000338335_5end | |||
|description=CAGE_peak_1_at_SLC12A4_5end | |||
|id=chr16:68002493..68002558,- | |||
|ontology_enrichment_celltype=CL:0000055!8.82e-20!180;CL:0000057!2.83e-12!75;CL:0000220!4.09e-11!246;CL:0002321!9.03e-11!248;CL:0000222!1.06e-10!119;CL:0000183!1.55e-10!59;CL:0000192!3.61e-10!42;CL:0000514!3.61e-10!42;CL:0000680!1.38e-09!57;CL:0000056!1.38e-09!57;CL:0000355!1.38e-09!57;CL:0000187!3.44e-09!54;CL:0000359!3.71e-08!32;CL:0000393!8.29e-07!60;CL:0000211!8.29e-07!60 | |||
|ontology_enrichment_celltype_v019=CL:0000359;9.04e-08;32!CL:0000192;1.01e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,8.88e-13,76;CL:0002321,7.02e-11,250;CL:0000222,9.33e-11,121;CL:0000192,4.72e-10,43;CL:0000514,4.72e-10,43;CL:0000680,1.61e-09,58;CL:0000056,1.61e-09,58;CL:0000355,1.61e-09,58;CL:0000187,4.02e-09,55;CL:0000359,3.71e-08,32;CL:0000393,8.91e-07,61;CL:0000211,8.91e-07,61 | |||
|ontology_enrichment_development_v019=CL:0000514;1.01e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!1.42e-21!365;UBERON:0000483!2.98e-19!309;UBERON:0000119!3.89e-19!312;UBERON:0002100!2.53e-18!216;UBERON:0005256!1.03e-17!143;UBERON:0000468!3.21e-17!659;UBERON:0000481!4.03e-16!347;UBERON:0003914!5.83e-16!118;UBERON:0004872!4.02e-15!84;UBERON:0000467!7.36e-15!625;UBERON:0000480!8.21e-15!626;UBERON:0002049!1.26e-13!79;UBERON:0007798!1.26e-13!79;UBERON:0000914!1.33e-13!83;UBERON:0002329!1.33e-13!83;UBERON:0003077!1.33e-13!83;UBERON:0003059!1.33e-13!83;UBERON:0007282!1.33e-13!83;UBERON:0009618!1.33e-13!83;UBERON:0007285!1.33e-13!83;UBERON:0000477!1.65e-13!286;UBERON:0000486!1.92e-13!82;UBERON:0003104!5.47e-13!238;UBERON:0009142!5.47e-13!238;UBERON:0000490!1.71e-12!138;UBERON:0000055!3.70e-12!69;UBERON:0004111!4.70e-12!241;UBERON:0004290!1.25e-11!70;UBERON:0001981!1.77e-11!60;UBERON:0007500!1.77e-11!60;UBERON:0004537!1.77e-11!60;UBERON:0006965!1.77e-11!60;UBERON:0001009!5.19e-11!113;UBERON:0002385!1.81e-10!63;UBERON:0001015!1.81e-10!63;UBERON:0000383!1.81e-10!63;UBERON:0001134!2.11e-10!61;UBERON:0002036!2.11e-10!61;UBERON:0003082!2.11e-10!61;UBERON:0004535!8.04e-10!110;UBERON:0003102!1.26e-09!95;UBERON:0000025!1.29e-09!194;UBERON:0001637!1.82e-09!42;UBERON:0003509!1.82e-09!42;UBERON:0004572!1.82e-09!42;UBERON:0003103!3.70e-09!69;UBERON:0002050!1.02e-08!605;UBERON:0005423!1.02e-08!605;UBERON:0000064!1.20e-08!219;UBERON:0000922!1.22e-08!612;UBERON:0000923!1.74e-08!604;UBERON:0005291!1.74e-08!604;UBERON:0006598!1.74e-08!604;UBERON:0002532!1.74e-08!604;UBERON:0004923!1.46e-07!57;UBERON:0009569!1.60e-07!113;UBERON:0004573!4.31e-07!33;UBERON:0004571!4.31e-07!33;UBERON:0000062!6.76e-07!511;UBERON:0007100!7.52e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;2.18e-07;42!UBERON:0003509;2.18e-07;42!UBERON:0004572;2.18e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000483,2.15e-19,306;UBERON:0000119,2.82e-19,309;UBERON:0003104,9.52e-17,160;UBERON:0009142,9.52e-17,160;UBERON:0003914,5.22e-16,117;UBERON:0002100,1.42e-15,199;UBERON:0004872,1.34e-14,83;UBERON:0005256,2.73e-14,122;UBERON:0000490,8.73e-14,148;UBERON:0000486,2.22e-13,83;UBERON:0007503,3.83e-13,78;UBERON:0002049,4.07e-13,78;UBERON:0007798,4.07e-13,78;UBERON:0004111,5.32e-12,240;UBERON:0007524,8.52e-12,73;UBERON:0000055,1.18e-11,68;UBERON:0002329,1.46e-11,71;UBERON:0003059,1.46e-11,71;UBERON:0007282,1.46e-11,71;UBERON:0004290,1.46e-11,71;UBERON:0009618,1.46e-11,71;UBERON:0003077,2.16e-11,72;UBERON:0007285,2.16e-11,72;UBERON:0007500,5.77e-11,59;UBERON:0001981,5.77e-11,59;UBERON:0004537,5.77e-11,59;UBERON:0006965,5.77e-11,59;UBERON:0001009,1.36e-10,112;UBERON:0002385,2.11e-10,64;UBERON:0001015,2.11e-10,64;UBERON:0000383,2.11e-10,64;UBERON:0001134,2.47e-10,62;UBERON:0002036,2.47e-10,62;UBERON:0003082,2.47e-10,62;UBERON:0003102,2.79e-10,99;UBERON:0001637,1.81e-09,42;UBERON:0003509,1.81e-09,42;UBERON:0004572,1.81e-09,42;UBERON:0004923,2.00e-09,66;UBERON:0004535,2.01e-09,109;UBERON:0000025,2.76e-09,192;UBERON:0003103,3.32e-09,68;UBERON:0005423,5.65e-08,581;UBERON:0000922,8.77e-08,592;UBERON:0009569,1.69e-07,112;UBERON:0004573,4.30e-07,33;UBERON:0004571,4.30e-07,33;UBERON:0007100,7.51e-07,27 | |||
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| |||
|short_description=p1@SLC12A4 | |||
}} |
Revision as of 11:59, 20 January 2014
Short description: | p1@SLC12A4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SLC12A4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000316341, ENST00000338335_5end |
EntrezGene: | SLC12A4 |
HGNC: | 10913 |
UniProt: | Q9UP95 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 8.88e-13 | 76 |
embryonic cell | 7.02e-11 | 250 |
mesodermal cell | 9.33e-11 | 121 |
smooth muscle cell | 4.72e-10 | 43 |
smooth muscle myoblast | 4.72e-10 | 43 |
muscle precursor cell | 1.61e-09 | 58 |
myoblast | 1.61e-09 | 58 |
multi-potent skeletal muscle stem cell | 1.61e-09 | 58 |
muscle cell | 4.02e-09 | 55 |
vascular associated smooth muscle cell | 3.71e-08 | 32 |
electrically responsive cell | 8.91e-07 | 61 |
electrically active cell | 8.91e-07 | 61 |