FFCP PHASE1:Hg19::chr17:7122175..7122187,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_at_chr17:7122175..7122187,- | |||
|id=chr17:7122175..7122187,- | |||
|ontology_enrichment_celltype=CL:0002550!1.25e-13!1;CL:0002253!1.99e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000243;9.51e-07;15!CL:0000125;9.51e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000243,9.65e-07,15;CL:0000125,9.65e-07,15;CL:0000030,9.65e-07,15;CL:0000339,9.65e-07,15 | |||
|ontology_enrichment_development_v019=UBERON:0003056;7.70e-34;3!UBERON:0006238;6.20e-10;10!CL:0000339;9.51e-07;15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3093;3.48e-09;11!DOID:5409;1.80e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:3093,3.55e-09,11;DOID:5409,1.80e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0001905!1.29e-26!2;UBERON:0002757!1.29e-26!2;UBERON:0010134!1.29e-26!2;UBERON:0002784!1.29e-26!2;UBERON:0005408!1.29e-26!2;UBERON:0001899!1.29e-26!2;UBERON:0001894!8.38e-17!7;UBERON:0006222!8.38e-17!7;UBERON:0003296!8.06e-14!4;UBERON:0010133!8.06e-14!4;UBERON:0000966!4.12e-11!5;UBERON:0005388!4.12e-11!5;UBERON:0001802!4.12e-11!5;UBERON:0003075!1.39e-10!86;UBERON:0007284!1.39e-10!86;UBERON:0005743!1.82e-10!86;UBERON:0000970!2.35e-10!20;UBERON:0002346!4.52e-10!90;UBERON:0002104!7.14e-10!21;UBERON:0000073!2.13e-09!94;UBERON:0001016!2.13e-09!94;UBERON:0003056!2.61e-09!61;UBERON:0000020!4.94e-09!23;UBERON:0001017!1.13e-08!82;UBERON:0001032!1.15e-08!24;UBERON:0004456!1.15e-08!24;UBERON:0000955!5.25e-08!69;UBERON:0006238!5.25e-08!69;UBERON:0002360!1.36e-07!2;UBERON:0000094!1.36e-07!2;UBERON:0007645!1.36e-07!2;UBERON:0001897!2.25e-07!2;UBERON:0000033!4.89e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;8.82e-51;2!UBERON:0002757;8.82e-51;2!UBERON:0010134;8.82e-51;2!UBERON:0005408;8.82e-51;2!UBERON:0001899;8.82e-51;2!UBERON:0003296;5.23e-26;4!UBERON:0010133;5.23e-26;4!UBERON:0002784;5.23e-26;4!UBERON:0000966;8.98e-21;5!UBERON:0005388;8.98e-21;5!UBERON:0001802;8.98e-21;5!UBERON:0001894;2.47e-15;7!UBERON:0002360;1.46e-13;2!UBERON:0000094;1.46e-13;2!UBERON:0010743;1.46e-13;2!UBERON:0000970;7.13e-12;20!UBERON:0002104;2.43e-11;21!UBERON:0000020;2.05e-10;23!UBERON:0001032;5.23e-10;24!UBERON:0004456;5.23e-10;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,8.82e-51,2;UBERON:0002757,8.82e-51,2;UBERON:0010134,8.82e-51,2;UBERON:0005408,8.82e-51,2;UBERON:0001899,8.82e-51,2;UBERON:0003296,5.23e-26,4;UBERON:0010133,5.23e-26,4;UBERON:0002784,5.23e-26,4;UBERON:0000966,1.71e-17,6;UBERON:0005388,1.71e-17,6;UBERON:0001802,1.71e-17,6;UBERON:0001894,2.47e-15,7;UBERON:0006222,2.47e-15,7;UBERON:0002360,1.37e-13,2;UBERON:0000094,1.37e-13,2;UBERON:0010743,1.37e-13,2;UBERON:0000970,2.43e-11,21;UBERON:0002104,2.43e-11,21;UBERON:0000020,5.23e-10,24;UBERON:0001032,5.23e-10,24;UBERON:0004456,5.23e-10,24;UBERON:0001017,1.07e-07,81;UBERON:0001016,5.89e-07,89;UBERON:0003056,7.40e-07,61 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34779121492523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381988425558278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53569778007781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.0446325954178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,1.10678907948985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,47.1417615572892,45.0620187773224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.0100742770978,5.53047641064543,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.6385724018903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535928260312357,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr17:7122175..7122187,- | |||
}} |
Revision as of 13:27, 20 January 2014
Short description: | p@chr17:7122175..7122187, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:7122175..7122187, - |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glial cell (sensu Vertebrata) | 9.65e-07 | 15 |
glial cell | 9.65e-07 | 15 |
glioblast | 9.65e-07 | 15 |
glioblast (sensu Vertebrata) | 9.65e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
pineal body | 8.82e-51 | 2 |
regional part of epithalamus | 8.82e-51 | 2 |
secretory circumventricular organ | 8.82e-51 | 2 |
circumventricular organ | 8.82e-51 | 2 |
epithalamus | 8.82e-51 | 2 |
gland of diencephalon | 5.23e-26 | 4 |
neuroendocrine gland | 5.23e-26 | 4 |
regional part of diencephalon | 5.23e-26 | 4 |
retina | 1.71e-17 | 6 |
photoreceptor array | 1.71e-17 | 6 |
posterior segment of eyeball | 1.71e-17 | 6 |
diencephalon | 2.47e-15 | 7 |
future diencephalon | 2.47e-15 | 7 |
meninx | 1.37e-13 | 2 |
membrane organ | 1.37e-13 | 2 |
meningeal cluster | 1.37e-13 | 2 |
eye | 2.43e-11 | 21 |
visual system | 2.43e-11 | 21 |
sense organ | 5.23e-10 | 24 |
sensory system | 5.23e-10 | 24 |
entire sense organ system | 5.23e-10 | 24 |
central nervous system | 1.07e-07 | 81 |
nervous system | 5.89e-07 | 89 |
pre-chordal neural plate | 7.40e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 3.55e-09 | 11 |
lung small cell carcinoma | 1.80e-07 | 4 |