FFCP PHASE1:Hg19::chr17:39183452..39183468,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=83895 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16777 | |||
|TSSclassifier=not | |||
|UniProt=Q9BYS1 | |||
|association_with_transcript=0bp_to_ENST00000361883,NM_031957,uc002hvu.2_5end | |||
|description=CAGE_peak_1_at_KRTAP1-5_5end | |||
|id=chr17:39183452..39183468,- | |||
|ontology_enrichment_celltype=CL:0000055!4.48e-34!180;CL:0000057!8.21e-29!75;CL:0002620!8.17e-19!23;CL:0000048!1.29e-15!430;CL:0000723!9.74e-15!436;CL:0000034!1.28e-13!444;CL:0000680!1.67e-12!57;CL:0000056!1.67e-12!57;CL:0000355!1.67e-12!57;CL:0000144!9.18e-12!625;CL:0002371!3.54e-11!591;CL:0000548!1.34e-10!679;CL:0000004!1.34e-10!679;CL:0000255!1.34e-10!679;CL:0000187!1.66e-10!54;CL:0000012!2.85e-10!682;CL:0000183!3.83e-10!59;CL:0002334!3.39e-09!12;CL:0000393!2.15e-08!60;CL:0000211!2.15e-08!60;CL:0000192!2.21e-08!42;CL:0000514!2.21e-08!42;CL:0002320!3.39e-08!365;CL:0000134!8.73e-08!358;CL:0000359!4.04e-07!32;CL:0002556!7.50e-07!6;CL:0000222!9.71e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0002620;7.58e-21;23!CL:0000057;1.53e-12;73!CL:0002334;7.59e-12;12!CL:0002320;2.85e-10;188!CL:0000134;5.96e-09;55!CL:0002556;1.40e-08;6!CL:0000680;3.31e-08;7!CL:0000723;1.05e-07;61!CL:0000048;1.79e-07;58!CL:0000499;1.99e-07;28!CL:0002552;7.67e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.47e-33,76;CL:0002620,8.45e-21,23;CL:0000048,2.29e-20,427;CL:0000723,1.47e-19,433;CL:0000034,1.62e-18,441;CL:0000134,6.96e-14,354;CL:0002320,1.75e-13,361;CL:0000219,5.88e-12,386;CL:0002334,8.04e-12,12;CL:0002556,1.53e-08,6;CL:0000499,1.86e-07,28;CL:0000680,4.87e-07,58;CL:0000056,4.87e-07,58;CL:0000355,4.87e-07,58;CL:0002552,6.65e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;1.90e-07;5!DOID:450;1.90e-07;5!DOID:66;1.90e-07;5!DOID:423;1.90e-07;5!DOID:0080000;1.90e-07;5!DOID:11722;1.90e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.91e-07,5;DOID:450,1.91e-07,5;DOID:66,1.91e-07,5;DOID:423,1.91e-07,5;DOID:0080000,1.91e-07,5;DOID:11722,1.91e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0000914!8.53e-22!83;UBERON:0002329!8.53e-22!83;UBERON:0003077!8.53e-22!83;UBERON:0003059!8.53e-22!83;UBERON:0007282!8.53e-22!83;UBERON:0009618!8.53e-22!83;UBERON:0007285!8.53e-22!83;UBERON:0003102!1.18e-20!95;UBERON:0002199!2.14e-17!45;UBERON:0002416!2.14e-17!45;UBERON:0004290!1.22e-16!70;UBERON:0002097!1.09e-15!40;UBERON:0000486!3.30e-14!82;UBERON:0005256!1.59e-13!143;UBERON:0001134!2.68e-12!61;UBERON:0002036!2.68e-12!61;UBERON:0003082!2.68e-12!61;UBERON:0002385!1.69e-11!63;UBERON:0001015!1.69e-11!63;UBERON:0000383!1.69e-11!63;UBERON:0002384!2.91e-09!375;UBERON:0002100!1.02e-08!216;UBERON:0000475!1.18e-07!365;UBERON:0001758!7.50e-07!6;UBERON:0003672!7.50e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;1.41e-13;41!UBERON:0002199;4.69e-13;46!UBERON:0002416;4.69e-13;46!UBERON:0002384;3.37e-10;198!UBERON:0003102;5.51e-10;50!UBERON:0001758;1.40e-08;6!UBERON:0003672;1.40e-08;6!UBERON:0003129;3.58e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,2.25e-20,99;UBERON:0002199,4.74e-20,46;UBERON:0002416,4.74e-20,46;UBERON:0002097,1.13e-17,41;UBERON:0002384,1.63e-14,371;UBERON:0007524,6.28e-10,73;UBERON:0002329,1.16e-09,71;UBERON:0003059,1.16e-09,71;UBERON:0007282,1.16e-09,71;UBERON:0004290,1.16e-09,71;UBERON:0009618,1.16e-09,71;UBERON:0003077,2.11e-09,72;UBERON:0007285,2.11e-09,72;UBERON:0007503,3.07e-09,78;UBERON:0001758,1.53e-08,6;UBERON:0003672,1.53e-08,6;UBERON:0000486,2.28e-08,83;UBERON:0003129,3.87e-07,7;UBERON:0005256,7.64e-07,122;UBERON:0001134,9.11e-07,62;UBERON:0002036,9.11e-07,62;UBERON:0003082,9.11e-07,62 | |||
|phase1_expression=11.6274162733156,3.63970890614671,1.69145284915165,5.00366491765652,0.446961094427288,7.85104671690332,2.53299878168311,1.26343974685366,0,0.245733936501509,0,0,0,0.247532705920093,0.331397375727916,0.672325146451775,0.602694528023977,3.65155045193687,0.975865597581014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,2.89151321907653,5.0133791063589,13.0361867064741,0,2.43317435151318,0,0,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.4364109856017,0.633152558322899,5.03154887090231,0,1.77334191099179,1.12135520028461,0,0.24666754841716,0,0,0,0,0,1.40592859100278,4.05808099879417,9.12754914471119,18.0832903467679,0.939475989150119,0.809364721840658,1.40450806702248,20.0071087829795,20.2676623564417,1.96318984233954,61.7761485786668,81.3508197326452,0,0,3.03005005117319,5.25497783462249,83.1192346452549,159.787854000625,720.246320127696,131.608539602179,0,31.5725758812397,29.8980344345994,81.8057138475909,19.8060123415706,23.5990291956025,47.1482188283501,92.8723113094633,27.0042131586026,23.6771922541713,51.2440561715552,75.941166379897,2.58633690910099,30.8858345489454,32.5429277275278,30.1817854312668,0,0,0,0,0,0,0,0,0,7.8224766164908,1.92972281457866,4.14404764057442,6.96551892047969,35.3720946018097,0,0,0,0,0,0,0,0,0,0,5.60967095213783,0,2.94017422771084,0,0,0,0,0.245976877086227,3.94605963686609,0,0,0,0,0.977424915930974,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0.93733833986777,0.335964256397719,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0.411309970813294,0,0,0,0,0.1466765716419,3.74887975697556,0,0.845302752556,44.9435417028431,53.0437928247967,10.0310875962235,0,13.5875311298211,0.142977993658148,0,1.64648067356154,1.95441710576241,0,0,0,0,0.099972991182057,0,0,0,2.87549826589899,0,17.1164286048862,76.1549673071467,73.971476118138,24.3522910006258,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,1.00034104211935,0,20.1731735684883,30.3329280955175,5.83498935625558,39.5937982675371,7.22270639346525,0,3.10419213877515,2.65690239414175,13.4589493035443,104.781639048508,0,0,0,0,0,0,0,0.604780586659361,36.2237399415414,12.1234958897569,7.01650236082684,13.4546106718486,22.0034117098682,26.219189146408,0,25.9072285588461,12.606882497232,39.5031620426422,14.5391240171414,16.5018737413142,0.241718899183244,0,0.184161977871793,20.8962295659584,55.9019885780621,70.6760596631296,0,0,0,0,0,0,0,0,0,1.35473218771926,2.00675909541941,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0.574265537996172,0,6.42735719376638,1.16004861950546,0.770243085573222,0,0.275673144969061,2.57808587683857,3.77043404176994,1.27839941124151,0.267096106940212,0,0,0,0,13.9453664789186,11.6480568327337,12.5466708628908,0,3.19383618190213,10.4391959049009,0.74129687641568,0,0,3.48017367190598,0,1.79128453917934,0,1.59101623962968,0,3.05783177891635,0,0.117812402345686,4.24583211303964,0,0,0,2.19342140668156,0,27.2999822815972,11.0296236923896,1.13008116620243,1.10273068709225,0.66343897524122,0.438450885253763,0,0,0,0.92947049429925,0.281695602532241,5.30622003154991,3.43871643545924,0.7133421029625,89.0450270817201,16.8886108238131,6.25660296623814,2.65631221636001,0.349934720244983,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0.333926115068718,0,0,0,0,0,0.102268682502155,0,322.548052405294,0,0,0,0,0,8.89095921157095,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38510465306835,1.48124672601102,0,0,0,1.27600463892768,53.6761897334913,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,2.40773294189637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.522355239482415,0.17472666824203,0,0,0,0,0,0,0,0.137041924646751,0.993573058514948,0,0,0,0,0,0,0,0,0,0.248505071130865,0,0,0,2.24396078799908,0,0,0,0,2.57859264851974,0,0,0,0,0,0,0,0,2.88239906833923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367182116944987,0,0,0,0,0,0,77.6489430507809,70.866162278504,86.5456504289934,0,0,27.7732475510237,0.339936274560377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.77615369237997,1.8697064787778,3.88364103051829,26.3270177332374,48.0494692347418,73.8543313925125,0.228840068396924,1.05861646634267,0.15543720058278,0.147855149989634,4.14171594625626,0,2.79473322377267,4.14706207840855,4.51930914748591,33.391683955951,0.901545653983311,4.18885733385675,0,25.6406609475609,0.107410557042488,15.7771478358688,44.9848354229436,2.00013882331577,14.7660153228601,12.459731084339,2.52369796457302,0,0,0.260994291965212,1.36023555307363,0.231522474323834,0.489473409012935,0.895444205407437,0.308801447160972,0,11.1314161945905,0,0,0,0.690860683462397,5.77333916737026,0,0,0,0,0,0,0.211312123358627,0,0,0,7.9452233499357,1.10463570151104,0,0,0,0,0,0,0,0,0,0,6.36008701306837,0,0,5.29013915536026,16.2310102997196,0,0,0,0,0,0,0,0,0,0,0,3.69682131681082,18.306340582424,0,0,0.150420656698515,3.0255760305528,0,0,0.327543835020193,2.51355346568977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.667388411352415,0.078493092850514,0,0,0,0.215927591218621,0,0,0,0,0,11.2239591062235,0.62164849248911,1.19502933965765,0.691259661814092,0,3.54996002191696,2.8120423570522,0,1.14553434272025,0.31020638566432,0,0,0.098150233615243,0,0,0.102662806856247,0,50.9996542712096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,42.651705786642,0,0,0,0,0.705789743431384,0,0,0,0,0,0,0,0,12.6478306176695,11.5543907157855,69.2202499398063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202117188958219,0,0,0,0,0,0,0.106727345877715,21.2379510515634,0.179650404213174,4.69281884806909,0,0,0,0,0 | |||
|short_description=p1@KRTAP1-5 | |||
}} |
Revision as of 15:15, 20 January 2014
Short description: | p1@KRTAP1-5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KRTAP1-5_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000361883, NM_031957, uc002hvu.2_5end |
EntrezGene: | KRTAP1-5 |
HGNC: | 16777 |
UniProt: | Q9BYS1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.47e-33 | 76 |
skin fibroblast | 8.45e-21 | 23 |
multi fate stem cell | 2.29e-20 | 427 |
somatic stem cell | 1.47e-19 | 433 |
stem cell | 1.62e-18 | 441 |
mesenchymal cell | 6.96e-14 | 354 |
connective tissue cell | 1.75e-13 | 361 |
motile cell | 5.88e-12 | 386 |
preadipocyte | 8.04e-12 | 12 |
fibroblast of periodontium | 1.53e-08 | 6 |
stromal cell | 1.86e-07 | 28 |
muscle precursor cell | 4.87e-07 | 58 |
myoblast | 4.87e-07 | 58 |
multi-potent skeletal muscle stem cell | 4.87e-07 | 58 |
fibroblast of gingiva | 6.65e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
surface structure | 2.25e-20 | 99 |
integument | 4.74e-20 | 46 |
integumental system | 4.74e-20 | 46 |
skin of body | 1.13e-17 | 41 |
connective tissue | 1.63e-14 | 371 |
dense mesenchyme tissue | 6.28e-10 | 73 |
somite | 1.16e-09 | 71 |
presomitic mesoderm | 1.16e-09 | 71 |
presumptive segmental plate | 1.16e-09 | 71 |
dermomyotome | 1.16e-09 | 71 |
trunk paraxial mesoderm | 1.16e-09 | 71 |
paraxial mesoderm | 2.11e-09 | 72 |
presumptive paraxial mesoderm | 2.11e-09 | 72 |
epithelial vesicle | 3.07e-09 | 78 |
periodontium | 1.53e-08 | 6 |
dentition | 1.53e-08 | 6 |
multilaminar epithelium | 2.28e-08 | 83 |
skull | 3.87e-07 | 7 |
trunk mesenchyme | 7.64e-07 | 122 |
skeletal muscle tissue | 9.11e-07 | 62 |
striated muscle tissue | 9.11e-07 | 62 |
myotome | 9.11e-07 | 62 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.91e-07 | 5 |
myotonic disease | 1.91e-07 | 5 |
muscle tissue disease | 1.91e-07 | 5 |
myopathy | 1.91e-07 | 5 |
muscular disease | 1.91e-07 | 5 |
myotonic dystrophy | 1.91e-07 | 5 |