FFCP PHASE1:Hg19::chr17:39659014..39659027,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3860 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=6415 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-2bp_to_ENST00000464634_5end | |||
|coexpression_cluster_id=C60 | |||
|description=CAGE_peak_14_at_KRT13_5end | |||
|id=chr17:39659014..39659027,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009143;1.53e-21;1!UBERON:0008814;2.23e-11;2!UBERON:0010056;2.23e-11;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000341!1.31e-18!2;UBERON:0003127!2.04e-18!2;UBERON:0001723!5.85e-13!3;UBERON:0001033!5.85e-13!3;UBERON:0010056!5.85e-13!3;UBERON:0002372!2.59e-10!1;UBERON:0001961!2.59e-10!1;UBERON:0001744!2.59e-10!1;UBERON:0001735!2.59e-10!1;UBERON:0000989!4.85e-10!1;UBERON:0008811!4.85e-10!1;UBERON:0006258!4.85e-10!1;UBERON:0005876!4.85e-10!1;UBERON:0004874!4.85e-10!1;UBERON:0000997!8.99e-10!1;UBERON:0005056!8.99e-10!1;UBERON:0001042!1.23e-08!10;UBERON:0009145!1.23e-08!10;UBERON:0000161!1.54e-08!35;UBERON:0000974!2.11e-08!10;UBERON:0006562!6.83e-08!11;UBERON:0000166!6.25e-07!21;UBERON:0000002!7.47e-07!6;UBERON:0001560!7.47e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0001723;2.38e-27;3!UBERON:0001033;2.38e-27;3!UBERON:0005795;3.12e-21;1!UBERON:0002372;6.31e-21;1!UBERON:0001961;6.31e-21;1!UBERON:0001744;6.31e-21;1!UBERON:0001042;6.31e-21;1!UBERON:0001735;6.31e-21;1!UBERON:0000002;3.59e-14;6!UBERON:0001560;3.59e-14;6!UBERON:0000341;2.02e-11;2!UBERON:0003127;3.70e-11;2!UBERON:0006562;3.70e-11;2!UBERON:0001043;4.52e-08;3!UBERON:0000165;5.47e-07;28 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,2.08e-27,3;UBERON:0001033,2.08e-27,3;UBERON:0010056,2.08e-27,3;UBERON:0002372,4.22e-21,1;UBERON:0001961,4.22e-21,1;UBERON:0001744,4.22e-21,1;UBERON:0001735,4.22e-21,1;UBERON:0001042,1.63e-18,10;UBERON:0009145,1.63e-18,10;UBERON:0006562,6.71e-17,11;UBERON:0000002,3.97e-14,6;UBERON:0001560,3.97e-14,6;UBERON:0000341,2.02e-11,2;UBERON:0003127,4.09e-11,2;UBERON:0001557,4.58e-10,19;UBERON:0000166,8.94e-09,22;UBERON:0005795,9.68e-09,22;UBERON:0001043,4.52e-08,3;UBERON:0009143,4.52e-08,3;UBERON:0000072,4.34e-07,47;UBERON:0000165,8.60e-07,29;UBERON:0000930,8.60e-07,29 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276242966807689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68471475667626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.23077990845765,1.15425387755696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195984794828755,0,0,0,0,0,0,9.5049236158651,0,0.677942222341597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5085370753095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235939446695481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,5.5440835294255,0.23806443146374,0,0,0,0,0,4.57205170583619,1.71116650542641,1.88585748440845,0.286888821570705,1.33064142618405,0,0,0,0,0,0,2.03448089157869,0,0,0 | |||
|short_description=p14@KRT13 | |||
}} |
Revision as of 15:16, 20 January 2014
Short description: | p14@KRT13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_KRT13_5end |
Coexpression cluster: | C60_esophagus_tonsil_throat_tongue_uterus_cervix_cervical |
Association with transcript: | -2bp_to_ENST00000464634_5end |
EntrezGene: | KRT13 |
HGNC: | 6415 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
tongue | 2.08e-27 | 3 |
gustatory system | 2.08e-27 | 3 |
future tongue | 2.08e-27 | 3 |
tonsil | 4.22e-21 | 1 |
mucosa-associated lymphoid tissue | 4.22e-21 | 1 |
lymphoid tissue | 4.22e-21 | 1 |
tonsillar ring | 4.22e-21 | 1 |
chordate pharynx | 1.63e-18 | 10 |
pharyngeal region of foregut | 1.63e-18 | 10 |
pharynx | 6.71e-17 | 11 |
uterine cervix | 3.97e-14 | 6 |
neck of organ | 3.97e-14 | 6 |
throat | 2.02e-11 | 2 |
open tracheal system trachea | 4.09e-11 | 2 |
upper respiratory tract | 4.58e-10 | 19 |
oral opening | 8.94e-09 | 22 |
embryonic uterus | 9.68e-09 | 22 |
esophagus | 4.52e-08 | 3 |
esophageal region | 4.52e-08 | 3 |
segment of respiratory tract | 4.34e-07 | 47 |
mouth | 8.60e-07 | 29 |
stomodeum | 8.60e-07 | 29 |