FFCP PHASE1:Hg19::chr17:75315994..75316022,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10801 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7323 | |||
|TSSclassifier=strong | |||
|UniProt=Q9UHD8 | |||
|association_with_transcript=397bp_to_ENST00000329047,NM_006640,uc002jtu.3_5end | |||
|coexpression_cluster_id=C3685 | |||
|description=CAGE_peak_7_at_SEPT9_5end | |||
|id=chr17:75315994..75316022,+ | |||
|ontology_enrichment_celltype=CL:0000055!7.74e-42!180;CL:0000057!1.32e-21!75;CL:0000183!6.36e-20!59;CL:0000680!4.28e-19!57;CL:0000056!4.28e-19!57;CL:0000355!4.28e-19!57;CL:0000187!1.09e-18!54;CL:0000192!5.26e-16!42;CL:0000514!5.26e-16!42;CL:0000048!2.18e-14!430;CL:0000393!4.86e-14!60;CL:0000211!4.86e-14!60;CL:0000723!2.14e-13!436;CL:0000359!4.51e-13!32;CL:0000034!1.87e-11!444;CL:0002620!7.09e-11!23;CL:0002371!3.13e-07!591;CL:0000222!4.35e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000359;6.16e-13;32!CL:0000192;2.98e-12;43!CL:0000187;8.67e-12;55!CL:0002620;2.49e-11;23!CL:0000057;4.25e-10;73!CL:0000393;1.17e-08;61!CL:0000211;1.17e-08;61!CL:0000134;1.44e-08;55!CL:0002320;4.06e-08;188!CL:0000048;4.31e-07;58!CL:0000723;5.01e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,8.49e-24,76;CL:0000680,1.98e-20,58;CL:0000056,1.98e-20,58;CL:0000355,1.98e-20,58;CL:0000187,5.34e-20,55;CL:0000192,3.83e-17,43;CL:0000514,3.83e-17,43;CL:0000048,1.53e-15,427;CL:0000393,2.38e-15,61;CL:0000211,2.38e-15,61;CL:0000723,2.44e-14,433;CL:0000359,9.34e-14,32;CL:0000034,1.48e-12,441;CL:0002620,1.98e-11,23;CL:0002320,4.45e-07,361 | |||
|ontology_enrichment_development_v019=CL:0000514;2.98e-12;43!CL:0000355;2.01e-11;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!2.16e-22!83;UBERON:0002329!2.16e-22!83;UBERON:0003077!2.16e-22!83;UBERON:0003059!2.16e-22!83;UBERON:0007282!2.16e-22!83;UBERON:0009618!2.16e-22!83;UBERON:0007285!2.16e-22!83;UBERON:0004290!4.27e-22!70;UBERON:0002385!1.12e-18!63;UBERON:0001015!1.12e-18!63;UBERON:0000383!1.12e-18!63;UBERON:0001134!1.71e-18!61;UBERON:0002036!1.71e-18!61;UBERON:0003082!1.71e-18!61;UBERON:0000486!2.49e-17!82;UBERON:0005256!3.77e-12!143;UBERON:0002199!1.49e-09!45;UBERON:0002416!1.49e-09!45;UBERON:0004872!3.07e-09!84;UBERON:0002097!8.87e-09!40;UBERON:0003102!4.14e-08!95;UBERON:0001637!7.43e-08!42;UBERON:0003509!7.43e-08!42;UBERON:0004572!7.43e-08!42;UBERON:0003104!1.80e-07!238;UBERON:0009142!1.80e-07!238;UBERON:0002204!2.18e-07!167;UBERON:0002384!2.67e-07!375;UBERON:0000479!2.88e-07!787;UBERON:0004573!5.51e-07!33;UBERON:0004571!5.51e-07!33;UBERON:0002049!9.43e-07!79;UBERON:0007798!9.43e-07!79 | |||
|ontology_enrichment_uberon_v019=UBERON:0002384;1.37e-07;198!UBERON:0002097;2.01e-07;41!UBERON:0002385;5.29e-07;31!UBERON:0001015;5.29e-07;31!UBERON:0000383;5.29e-07;31!UBERON:0003102;7.07e-07;50!UBERON:0002204;8.31e-07;70 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,2.12e-23,73;UBERON:0007503,2.57e-23,78;UBERON:0002329,3.19e-23,71;UBERON:0003059,3.19e-23,71;UBERON:0007282,3.19e-23,71;UBERON:0004290,3.19e-23,71;UBERON:0009618,3.19e-23,71;UBERON:0003077,5.15e-23,72;UBERON:0007285,5.15e-23,72;UBERON:0002385,1.31e-19,64;UBERON:0001015,1.31e-19,64;UBERON:0000383,1.31e-19,64;UBERON:0001134,2.07e-19,62;UBERON:0002036,2.07e-19,62;UBERON:0003082,2.07e-19,62;UBERON:0000486,4.22e-18,83;UBERON:0005256,9.31e-15,122;UBERON:0003104,2.15e-12,160;UBERON:0009142,2.15e-12,160;UBERON:0002199,2.20e-10,46;UBERON:0002416,2.20e-10,46;UBERON:0002097,1.46e-09,41;UBERON:0002384,5.41e-08,371;UBERON:0001637,8.09e-08,42;UBERON:0003509,8.09e-08,42;UBERON:0004572,8.09e-08,42;UBERON:0004872,8.99e-08,83;UBERON:0003102,2.10e-07,99;UBERON:0004573,3.56e-07,33;UBERON:0004571,3.56e-07,33;UBERON:0002204,7.45e-07,167 | |||
|phase1_expression=5.99538651592837,4.06790995392868,4.51054093107108,5.00366491765652,6.25745532198203,4.36169262050184,2.53299878168311,13.8978372153903,1.04474251279935,3.68600904752263,4.88460817580699,17.4753097704138,17.4086205630779,6.18831764800233,6.62794751455832,12.101852636132,10.8485015044316,10.2243412654232,8.78279037822912,0.861847406537515,1.22400414746552,1.56727360739044,0.286235987131057,0.136874425072884,2.00868223351684,0.229240217243854,0.410502947249729,0.472264687882075,0.786728553697808,0,0.309632246632152,0,0,0,0,0,0,0,0.601633342410425,0.217010870715852,2.68698569087909,1.94336199611388,1.03030227053675,0.581592955118259,0.755751887377619,0,0.232429036905685,0,0.619412741790207,0,0.256160706529101,0,0,0,0,0,0.272906150057846,0,0.612167784741805,0.320929027076094,0.639337125799041,0.989553900560148,1.19678194572979,0.426224750532694,0,2.26954089876456,0.622822248995575,0.502497330513487,1.0429658368404,0.434377689410233,0.605399502633369,0,0.316462387440884,0,0,0,0.336985893439485,0,0,0,0,0.182664153764634,0,1.09227722252426,0,0,0.800791974072025,0,0,0,1.1384259382189,0.587237189370939,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,26.8187552945358,5.36560687762909,5.24236503558474,20.2405925335357,11.0294340339896,6.80778639115871,11.1340032587154,8.75942766544745,0,0,0.175669571386252,2.42311289670768,1.82147644146271,2.22470665670658,1.9472843619281,1.56716763569341,1.72845348674525,0,0,0,0.198762407366705,6.881876760849,0,0.56530794192401,0,0.550236083880135,0.417989933073621,0.775250277507987,1.06729878806013,0.66944122552934,0,0.760272105718513,0.488124115096339,1.47065232138347,0,0.267899184852239,0.22452937262617,0.563057402416611,0,0.949265659568129,0.366403487860815,0,0,1.3082821564276,7.45457927542978,8.48424428152684,4.63432132846266,7.74458876021797,9.22137793715728,6.72813120170769,14.9448594021587,9.62003438826924,5.29058760179603,11.4504071259235,12.4231046366229,18.3142487450367,12.67587033856,16.8711430920334,9.05264222807929,11.9799082524334,8.66802347200446,14.0921398372518,15.7016756037088,17.5563508377811,8.16616685019573,13.757443538918,5.57959218349133,9.50402285825643,5.93440630268536,41.8674226491492,39.5239977998931,12.1202002046928,15.3895779442516,13.2990775432408,12.2913733846635,6.43624371177941,6.00952235626387,6.23877007380116,19.7328599257748,7.901623386287,8.9011398487016,24.9075609750054,12.8815661548049,23.4452891441523,17.3088676388379,16.2025278951616,11.4975666090214,19.6898343910409,7.91629128323774,10.0220555227663,25.9157002537128,18.2361297792029,20.3472710772585,0.57978255948989,0,0.286804595389004,0,0,0,0.310983165046111,0,0,9.38697193978896,10.935095949279,24.8642858434465,6.50115099244771,8.66255378003503,8.04486240270938,8.42923450390509,8.67639707580535,6.17646247301406,8.93305720778865,9.01628352622167,8.62920372225052,7.6526371398885,9.61867892365976,2.95262181849859,32.2556079747925,13.1703683626048,27.931655163253,0,0,0,0,0.245976877086227,6.51957679134397,0.98775256867763,0,1.60846355858609,0.648119116109707,18.2452650973782,29.1181739878282,0,0,4.3441216867254,0.721832238805369,0,0,0,0,1.72351904261178,0.234004265139238,0.594524649154913,0,0.16798212819886,0.567100388969546,0.179117045405697,1.45316969256981,2.30029607499127,0,1.23267807618516,3.52457796419313,8.79131715843465,15.275334444592,8.8262073066115,17.5714675756808,12.8939191931052,6.84289784090821,15.1156414273886,14.1161237186641,10.2897515747008,37.1153889183144,29.645284680663,19.2879691709099,12.79789986002,14.3062578340753,16.060752298564,12.4990914794889,26.0018592278415,26.2351521747385,35.4622830058196,36.4998385252056,10.4373935370448,16.2786481617433,31.2831327976692,10.0978217131058,8.17401482107855,13.4631818398683,0,0,0.99972991182057,2.43247561282381,2.51128545716063,4.21667878966063,11.2623682081044,14.9320516584348,1.42636905040718,7.23906533337896,9.04095819221687,5.90901178691655,0,0,0,0,0.76228387266739,0,0,0.837581326671744,0,0,0,0,5.15304265220388,6.5022167737758,13.291986161287,17.6775232301186,12.3116002270042,9.77754973210395,16.0483738540017,20.4643347814849,18.1926003244788,3.10419213877515,16.6056399633859,18.4369168541703,6.95068915744663,38.5728280201599,26.078900209625,0.206768026122887,0,0.320182673410333,9.09382714338778,9.98612637062982,16.0266855464731,5.21026396419431,8.5938705041315,6.45518217196069,6.79137491055215,7.16390148693385,7.07757253031873,7.42090332224955,11.5657270351992,14.9151849263027,13.1403449622095,7.2695620085707,18.9422916889734,0,0.40101294060657,0.0920809889358963,7.00368133804101,10.0150142403694,6.81846957789005,0.902399225814824,0,0,0,0.211103257785751,10.2360045663807,6.29346709523108,1.29549549661284,6.16909010761157,4.33514300070165,5.51858751240339,0,0,0.447749509444357,0,0,0.256450125116389,0.328014645699706,0,1.64865618636356,31.1336180382368,27.3931539736352,1.14853107599234,1.30012049207304,11.2478750890912,7.15363315361703,19.1020285222159,16.578396870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| |||
|short_description=p7@SEPT9 | |||
}} |
Revision as of 17:34, 20 January 2014
Short description: | p7@SEPT9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_SEPT9_5end |
Coexpression cluster: | C3685_Fibroblast_Pericytes_Mesenchymal_Meningeal_Trabecular_Adipocyte_Saos2 |
Association with transcript: | 397bp_to_ENST00000329047, NM_006640, uc002jtu.3_5end |
EntrezGene: | SEPT9 |
HGNC: | 7323 |
UniProt: | Q9UHD8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 8.49e-24 | 76 |
muscle precursor cell | 1.98e-20 | 58 |
myoblast | 1.98e-20 | 58 |
multi-potent skeletal muscle stem cell | 1.98e-20 | 58 |
muscle cell | 5.34e-20 | 55 |
smooth muscle cell | 3.83e-17 | 43 |
smooth muscle myoblast | 3.83e-17 | 43 |
multi fate stem cell | 1.53e-15 | 427 |
electrically responsive cell | 2.38e-15 | 61 |
electrically active cell | 2.38e-15 | 61 |
somatic stem cell | 2.44e-14 | 433 |
vascular associated smooth muscle cell | 9.34e-14 | 32 |
stem cell | 1.48e-12 | 441 |
skin fibroblast | 1.98e-11 | 23 |
connective tissue cell | 4.45e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
dense mesenchyme tissue | 2.12e-23 | 73 |
epithelial vesicle | 2.57e-23 | 78 |
somite | 3.19e-23 | 71 |
presomitic mesoderm | 3.19e-23 | 71 |
presumptive segmental plate | 3.19e-23 | 71 |
dermomyotome | 3.19e-23 | 71 |
trunk paraxial mesoderm | 3.19e-23 | 71 |
paraxial mesoderm | 5.15e-23 | 72 |
presumptive paraxial mesoderm | 5.15e-23 | 72 |
muscle tissue | 1.31e-19 | 64 |
musculature | 1.31e-19 | 64 |
musculature of body | 1.31e-19 | 64 |
skeletal muscle tissue | 2.07e-19 | 62 |
striated muscle tissue | 2.07e-19 | 62 |
myotome | 2.07e-19 | 62 |
multilaminar epithelium | 4.22e-18 | 83 |
trunk mesenchyme | 9.31e-15 | 122 |
mesenchyme | 2.15e-12 | 160 |
entire embryonic mesenchyme | 2.15e-12 | 160 |
integument | 2.20e-10 | 46 |
integumental system | 2.20e-10 | 46 |
skin of body | 1.46e-09 | 41 |
connective tissue | 5.41e-08 | 371 |
artery | 8.09e-08 | 42 |
arterial blood vessel | 8.09e-08 | 42 |
arterial system | 8.09e-08 | 42 |
splanchnic layer of lateral plate mesoderm | 8.99e-08 | 83 |
surface structure | 2.10e-07 | 99 |
systemic artery | 3.56e-07 | 33 |
systemic arterial system | 3.56e-07 | 33 |
musculoskeletal system | 7.45e-07 | 167 |