FFCP PHASE1:Hg19::chr18:67715292..67715310,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=25914 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=18654 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_AK129866_5end | |||
|coexpression_cluster_id=C528 | |||
|description=CAGE_peak_4_at_RTTN_5end | |||
|id=chr18:67715292..67715310,- | |||
|ontology_enrichment_celltype=CL:0002076!1.52e-16!43;CL:0002368!8.34e-12!13;CL:0000220!1.05e-11!246;CL:0002321!1.83e-11!248;CL:0002077!1.85e-11!33;CL:0000223!5.79e-11!59;CL:0000066!6.45e-11!254;CL:0002620!5.48e-10!23;CL:0002159!1.24e-09!13;CL:0000622!4.28e-08!5;CL:0002251!4.48e-08!21;CL:0000362!2.10e-07!8;CL:0000515!6.79e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0002368;1.45e-24;13!CL:0002077;1.90e-18;34!CL:0002159;2.03e-18;14!CL:0002202;5.09e-16;9!CL:0002632;5.09e-16;9!CL:0002166;3.79e-14;3!CL:0002621;6.06e-14;3!CL:0002076;3.11e-13;42!CL:0000307;4.33e-13;3!CL:0002328;5.32e-13;3!CL:0000362;1.78e-11;9!CL:0002327;2.77e-10;4!CL:0000317;1.70e-09;2!CL:1000448;1.70e-09;2!CL:0002308;1.70e-09;2!CL:0002140;1.70e-09;2!CL:0000148;1.73e-09;10!CL:0000056;2.78e-09;4!CL:0000312;4.78e-08;5!CL:0000622;5.73e-08;5!CL:0000150;2.30e-07;9!CL:0000240;9.08e-07;6!CL:0000311;9.08e-07;6!CL:0000079;9.08e-07;6!CL:0000237;9.08e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002368,1.15e-24,13;CL:0002077,2.07e-20,34;CL:0002159,2.32e-18,14;CL:0000066,2.38e-17,253;CL:0002076,1.69e-16,42;CL:0002202,4.13e-16,9;CL:0002632,4.13e-16,9;CL:0002166,3.80e-14,3;CL:0002621,6.08e-14,3;CL:0002328,3.53e-13,3;CL:0000068,4.71e-13,3;CL:0000069,4.71e-13,3;CL:0000307,4.71e-13,3;CL:0000377,4.71e-13,3;CL:0002321,6.74e-12,250;CL:0000362,2.02e-11,9;CL:0000223,4.59e-11,58;CL:0002327,2.65e-10,4;CL:0000148,1.52e-09,10;CL:0000541,1.52e-09,10;CL:0000317,1.97e-09,2;CL:1000448,1.97e-09,2;CL:0002308,1.97e-09,2;CL:0002140,1.97e-09,2;CL:0000515,3.05e-09,4;CL:0000221,5.74e-09,72;CL:0000312,5.03e-08,5;CL:0000622,7.20e-08,5;CL:0000150,3.20e-07,9;CL:0000240,9.46e-07,6;CL:0000311,9.46e-07,6;CL:0000079,9.46e-07,6;CL:0000237,9.46e-07,6;CL:0000036,9.46e-07,6;CL:0000357,9.46e-07,6;CL:0000114,9.46e-07,6;CL:0000147,9.68e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000377;4.33e-13;3!CL:0000515;2.78e-09;4!CL:0000357;9.08e-07;6!CL:0000114;9.08e-07;6 | |||
|ontology_enrichment_disease=DOID:1749!7.87e-07!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002097!1.24e-10!40;UBERON:0003102!4.89e-10!95;UBERON:0002199!8.21e-09!45;UBERON:0002416!8.21e-09!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0001949;6.06e-14;3!UBERON:0004815;5.32e-13;3!UBERON:0002031;5.32e-13;3!UBERON:0000486;3.16e-12;12!UBERON:0001708;1.03e-10;4!UBERON:0008895;1.03e-10;4!UBERON:0001911;2.77e-10;4!UBERON:0002419;1.70e-09;2!UBERON:0007771;1.70e-09;2!UBERON:0003297;1.70e-09;2!UBERON:0001821;1.70e-09;2!UBERON:0003487;1.70e-09;2!UBERON:0001820;1.70e-09;2!UBERON:0007196;2.37e-09;15!UBERON:0001558;2.37e-09;15!UBERON:0003350;6.95e-09;8!UBERON:0011159;1.20e-08;5!UBERON:0004807;1.97e-08;22!UBERON:0005911;3.93e-08;36!UBERON:0002185;5.66e-08;5!UBERON:0000365;6.15e-08;5!UBERON:0010371;1.85e-07;31!UBERON:0001003;9.43e-07;15!UBERON:0007376;9.43e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,6.08e-14,3;UBERON:0004815,3.53e-13,3;UBERON:0002031,3.53e-13,3;UBERON:0001708,1.03e-10,4;UBERON:0008895,1.03e-10,4;UBERON:0001911,2.65e-10,4;UBERON:0005333,2.65e-10,4;UBERON:0008425,2.65e-10,4;UBERON:0005311,2.65e-10,4;UBERON:0002419,1.97e-09,2;UBERON:0007771,1.97e-09,2;UBERON:0003297,1.97e-09,2;UBERON:0001821,1.97e-09,2;UBERON:0003487,1.97e-09,2;UBERON:0001820,1.97e-09,2;UBERON:0005089,1.97e-09,2;UBERON:0005088,1.97e-09,2;UBERON:0007196,2.10e-09,15;UBERON:0001558,2.10e-09,15;UBERON:0003350,6.62e-09,8;UBERON:0011159,1.21e-08,5;UBERON:0002185,4.45e-08,5;UBERON:0000365,6.24e-08,5;UBERON:0001004,6.46e-08,74;UBERON:0010188,2.92e-07,6;UBERON:0002539,2.92e-07,6;UBERON:0008816,2.92e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.0330546937471,2.71085326900425,1.84877005083394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,0,0,0,0,0.087834785693126,0.72038491523742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0.633152558322899,0.529636723252875,1.14734648299525,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0.438977620880838,0,0,0.113432183160021,0.538168907066586,0,0,0.900273288253207,0.721367704669072,0.772921620136887,0.18611685633159,0.506328996723799,1.36411807225678,0.252433774244115,0.368199594569197,0.323292113637624,0.710019185033229,0.201504196455281,0.339121184620975,26.0902151770451,15.2737827530867,7.1701148847251,0,0,0,0,0,0,0,0,0,0.928735856063958,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,2.19500570817251,3.37205259772859,4.62433273093502,0.833296006426766,0,0,0,0.34779121492523,0,0,0,0,0,0,0,0,0,14.9974134378843,34.6043184089651,19.5649634194493,8.68717670217628,11.3347236020445,3.4504441124869,0,0,0,0,0,0.253991577168676,1.52795370223311,1.17217447210047,0,1.85089486865982,1.8020583470635,1.14330573052231,0,0,0,0.775630294546667,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0.602878754119172,0,0.199945982364114,0,0,0,0,0,1.42636905040718,1.15825045334063,0.821905290201534,1.43248770591916,0,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.744323423456331,0,0.280660094433074,0,0,0,0,0,0,0,0,0,0,11.6293752775905,0.276242966807689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,8.03971753194641,3.25030123018261,0,0.193341436584244,0,0,0,0,0,0,0.0890320356467374,9.0906703448538,4.99694175149276,9.82617886208298,0.809262246844399,0.929691098594572,0.31481234683064,0.6970372701606,0.616067160352178,0,1.73986598415015,0,0.429374660225974,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0.0982490410131212,0,0,0.211107635297664,0.329294892959902,0,0,8.27510169439404,1.34060455107157,5.44454924306613,0.0941438007767792,0.43050537267123,0,1.33029046061003,6.20253180558791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0.296964680832639,0,0,0,2.22617410045812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.455768223388005,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0.881931576729399,3.5694274697965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288950589901519,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0.137539436597234,0,0,0,0,0,0.315222829196793,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0.146552233678082,0,0,0,0,0,0,0,0,0,0,0,1.27668251554036,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,1.49976489554528,0,0,0,0,0,0.149254802886874,0,0,0,0.50313580350515,0,0.457680136793847,0,0.15543720058278,0,0,1.34940933649081,0.310525913752519,0,0,0,1.80309130796662,0,0,0,1.71856891267982,0,0,0.400027764663154,0,0,0,0,0,0,0,0.463044948647668,0,0,0,3.28926074368061,0.176689145945881,1.3503982678964,0,0,0,0,0,0,0,0,0,0.245772908753719,0.211312123358627,0,0,0,0,0,0.699397538597222,1.24415452006595,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0.392590874004102,0,0.183428598521679,0.924205329202706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142953088353313,0,0,0,0,1.24329698497822,0.3414369541879,0.691259661814092,0,0,0,0,0,0,0,0,0,0,0,0.205325613712494,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,1.05868461514708,0,0,0,0,0,0.0679914901909147,0,0,0.743990036333503,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,3.90735689332678,0,0,0,0,0,0,0,0,0 | |||
|short_description=p4@RTTN | |||
}} |
Revision as of 19:46, 20 January 2014
Short description: | p4@RTTN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_RTTN_5end |
Coexpression cluster: | C528_Gingival_Mallassezderived_Keratinocyte_Sebocyte_Prostate_Urothelial_Small |
Association with transcript: | 0bp_to_AK129866_5end |
EntrezGene: | RTTN |
HGNC: | 18654 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 6.08e-14 | 3 |
lower respiratory tract epithelium | 3.53e-13 | 3 |
epithelium of bronchus | 3.53e-13 | 3 |
jaw skeleton | 1.03e-10 | 4 |
splanchnocranium | 1.03e-10 | 4 |
mammary gland | 2.65e-10 | 4 |
mammary bud | 2.65e-10 | 4 |
mammary ridge | 2.65e-10 | 4 |
mammary placode | 2.65e-10 | 4 |
skin gland | 1.97e-09 | 2 |
epidermis gland | 1.97e-09 | 2 |
gland of integumental system | 1.97e-09 | 2 |
sebaceous gland | 1.97e-09 | 2 |
skin sebaceous gland | 1.97e-09 | 2 |
sweat gland | 1.97e-09 | 2 |
sweat gland placode | 1.97e-09 | 2 |
sebaceous gland placode | 1.97e-09 | 2 |
tracheobronchial tree | 2.10e-09 | 15 |
lower respiratory tract | 2.10e-09 | 15 |
epithelium of mucosa | 6.62e-09 | 8 |
primary subdivision of cranial skeletal system | 1.21e-08 | 5 |
bronchus | 4.45e-08 | 5 |
urothelium | 6.24e-08 | 5 |
respiratory system | 6.46e-08 | 74 |
protuberance | 2.92e-07 | 6 |
pharyngeal arch | 2.92e-07 | 6 |
embryonic head | 2.92e-07 | 6 |