FFCP PHASE1:Hg19::chr19:18404268..18404281,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C12 | |||
|description=CAGE_peak_at_chr19:18404268..18404281,- | |||
|id=chr19:18404268..18404281,- | |||
|ontology_enrichment_celltype=CL:0000557!1.47e-27!71;CL:0000839!2.20e-24!70;CL:0000860!1.85e-23!45;CL:0000766!3.38e-23!76;CL:0000763!7.19e-22!112;CL:0000049!7.19e-22!112;CL:0002009!5.29e-21!65;CL:0000738!3.04e-20!140;CL:0000988!5.89e-20!182;CL:0002393!1.01e-19!9;CL:0002397!1.01e-19!9;CL:0002057!1.57e-19!42;CL:0000037!8.34e-19!172;CL:0000566!8.34e-19!172;CL:0002031!1.40e-18!124;CL:0002194!1.50e-18!63;CL:0000576!1.50e-18!63;CL:0000040!1.50e-18!63;CL:0000559!1.50e-18!63;CL:0002032!3.13e-17!165;CL:0000837!3.13e-17!165;CL:0002087!1.46e-14!119;CL:0002274!2.49e-12!5;CL:0000457!2.49e-12!5;CL:0002191!2.49e-12!5;CL:0000097!2.49e-12!5;CL:0000831!2.49e-12!5;CL:0002028!2.49e-12!5;CL:0000080!1.69e-11!6;CL:0000875!5.58e-08!3;CL:0002396!5.58e-08!3;CL:0000134!8.29e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:0000097;1.56e-71;5!CL:0002591;2.70e-40;1!CL:0000163;2.91e-40;9!CL:0000875;1.96e-14;3!CL:0002396;1.96e-14;3!CL:0000151;8.18e-11;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,1.56e-71,5;CL:0002028,1.56e-71,5;CL:0000163,2.91e-40,9;CL:0002591,3.30e-40,1;CL:0000875,1.83e-14,3;CL:0002396,1.83e-14,3;CL:0000151,9.21e-11,36;CL:0000839,3.69e-10,66;CL:0000557,5.09e-10,67;CL:0000766,2.24e-09,72 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.19e-29!102;UBERON:0003061!1.19e-29!102;UBERON:0002371!1.59e-26!80;UBERON:0002193!7.79e-26!112;UBERON:0001474!6.50e-24!86;UBERON:0004765!9.09e-19!101;UBERON:0001434!9.09e-19!101;UBERON:0002405!2.37e-17!115;UBERON:0003081!1.48e-11!216;UBERON:0002204!3.63e-11!167;UBERON:0001737!6.88e-10!9;UBERON:0001557!5.41e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0000078;6.30e-21;2!UBERON:0002012;6.30e-21;2!UBERON:0008886;6.30e-21;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000078,6.96e-21,2;UBERON:0007497,6.96e-21,2;UBERON:0003643,6.96e-21,2;UBERON:0003504,6.96e-21,2;UBERON:0003469,6.96e-21,2;UBERON:0003496,6.96e-21,2;UBERON:0002012,6.96e-21,2;UBERON:0008886,6.96e-21,2;UBERON:0007303,6.96e-21,2;UBERON:0002061,6.96e-21,2;UBERON:0005432,6.96e-21,2;UBERON:0004363,6.96e-21,2;UBERON:0004145,2.09e-14,3;UBERON:0003498,3.49e-09,5;UBERON:0005985,3.49e-09,5;UBERON:0002371,6.37e-09,76;UBERON:0001474,2.54e-08,82;UBERON:0010188,7.25e-08,6;UBERON:0002539,7.25e-08,6;UBERON:0003351,7.25e-08,6;UBERON:0008816,7.25e-08,6;UBERON:0004765,1.22e-07,90;UBERON:0002405,2.04e-07,93;UBERON:0002390,4.54e-07,98;UBERON:0003061,4.54e-07,98;UBERON:0001434,6.11e-07,100 | |||
|phase1_expression=0,0,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0.553995408531877,0.200544447470142,0.651032612147555,0,0,0,0.145398238779565,0.377875943688809,0.485168122375632,0,0,0.309706370895104,0,0,0,0.344745680736619,0.645484683583826,0,0.376484679085209,0.545812300115692,0.224723484445085,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0.434377689410233,0,0,0,0.422510572623884,0.850417199860174,0.838634582033504,0.336985893439485,0,0.48217676009124,0.855038231223746,1.39241674039363,0.730656615058536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226618685395132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0.118306800039844,0,0.241011029883482,0.110293972732394,0.217879444092406,0,0.134831308160164,0.196221465125346,0.769494313892781,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0.985326475791887,0.704387472105808,7.04915592838625,3.45887888200707,5.30218220390796,0,0.381988425558278,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0.224170287987055,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0.206768026122887,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182091168006717,0.131124414959424,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,1.13008116620243,0.551365343546124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199579371432817,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0,0,0,0.0897576444097721,0.108647371922008,0,0,0,0,0,0.166211681900156,0,0.392125068635479,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0.123563938946503,0.417687798021821,0,0.802577647298789,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0.0967563312890851,0.292357268344742,0.328461828212837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.525774708558629,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0.77380195455795,0.0607495566580247,0,0,0,0,0,0,0,0,0.25426853765475,0,0,0,0,0.492555124496034,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0.221858103073705,0,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0.829412415681711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0.19998739585493,0,0,0,0.368211900503681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0.158013611732727,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18378979906969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr19:18404268..18404281,- | |||
}} |
Revision as of 22:11, 20 January 2014
Short description: | p@chr19:18404268..18404281, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:18404268..18404281, - |
Coexpression cluster: | C12_Mast_Basophils_immature_chorionic_mature_CD14_Eosinophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 1.56e-71 | 5 |
basophil mast progenitor cell | 1.56e-71 | 5 |
endocrine cell | 2.91e-40 | 9 |
smooth muscle cell of the pulmonary artery | 3.30e-40 | 1 |
non-classical monocyte | 1.83e-14 | 3 |
CD14-low, CD16-positive monocyte | 1.83e-14 | 3 |
secretory cell | 9.21e-11 | 36 |
myeloid lineage restricted progenitor cell | 3.69e-10 | 66 |
granulocyte monocyte progenitor cell | 5.09e-10 | 67 |
myeloid leukocyte | 2.24e-09 | 72 |
Ontology term | p-value | n |
---|---|---|
mixed ectoderm/mesoderm/endoderm-derived structure | 6.96e-21 | 2 |
developing epithelial placode | 6.96e-21 | 2 |
respiratory system arterial blood vessel | 6.96e-21 | 2 |
respiratory system blood vessel | 6.96e-21 | 2 |
respiratory system artery | 6.96e-21 | 2 |
head blood vessel | 6.96e-21 | 2 |
pulmonary artery | 6.96e-21 | 2 |
pulmonary vascular system | 6.96e-21 | 2 |
pharyngeal vasculature | 6.96e-21 | 2 |
truncus arteriosus | 6.96e-21 | 2 |
aortic sac | 6.96e-21 | 2 |
pharyngeal arch artery | 6.96e-21 | 2 |
outflow tract | 2.09e-14 | 3 |
heart blood vessel | 3.49e-09 | 5 |
coronary vessel | 3.49e-09 | 5 |
bone marrow | 6.37e-09 | 76 |
bone element | 2.54e-08 | 82 |
protuberance | 7.25e-08 | 6 |
pharyngeal arch | 7.25e-08 | 6 |
pharyngeal epithelium | 7.25e-08 | 6 |
embryonic head | 7.25e-08 | 6 |
skeletal element | 1.22e-07 | 90 |
immune system | 2.04e-07 | 93 |
hematopoietic system | 4.54e-07 | 98 |
blood island | 4.54e-07 | 98 |
skeletal system | 6.11e-07 | 100 |