FFCP PHASE1:Hg19::chr19:29098175..29098195,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr19:29098175..29098195,+ | |||
|id=chr19:29098175..29098195,+ | |||
|ontology_enrichment_celltype=CL:0000785!1.77e-12!2;CL:0000955!1.77e-12!2;CL:0000818!1.77e-12!2;CL:0000954!1.77e-12!2;CL:0000816!1.77e-12!2;CL:0000037!8.39e-09!172;CL:0000566!8.39e-09!172;CL:0000817!1.33e-08!3;CL:0002032!3.03e-08!165;CL:0000837!3.03e-08!165;CL:0000988!4.29e-08!182;CL:0000945!5.53e-08!24;CL:0000826!5.53e-08!24;CL:0000819!2.09e-07!1;CL:0000946!9.51e-07!1;CL:0000786!9.51e-07!1;CL:0000980!9.51e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0000785;8.95e-20;1!CL:0000819;8.95e-20;1!CL:0002178;1.99e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000819,8.95e-20,1;CL:0000785,1.43e-10,2;CL:0000955,1.43e-10,2;CL:0000818,1.43e-10,2;CL:0000954,1.43e-10,2;CL:0000816,1.43e-10,2;CL:0000817,1.82e-07,3;CL:0002178,2.05e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000954;1.43e-10;2 | |||
|ontology_enrichment_disease=DOID:2531!2.46e-25!51;DOID:0060083!2.46e-25!51;DOID:8692!2.56e-20!31;DOID:1240!1.20e-18!39;DOID:1036!1.10e-17!8;DOID:0050686!3.51e-12!137;DOID:162!1.03e-09!235;DOID:0060058!1.96e-09!10;DOID:14566!2.10e-09!239;DOID:0060073!2.09e-07!1;DOID:8675!2.09e-07!1;DOID:2355!2.22e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:8692;4.30e-20;31!DOID:0060073;8.95e-20;1!DOID:8675;8.95e-20;1!DOID:2355;1.18e-19;1!DOID:0060058;5.26e-17;10!DOID:2531;6.89e-14;51!DOID:0060083;6.89e-14;51!DOID:1240;1.58e-11;39!DOID:74;1.64e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,5.45e-28,51;DOID:0060083,5.45e-28,51;DOID:8692,1.07e-20,31;DOID:0060073,8.95e-20,1;DOID:8675,8.95e-20,1;DOID:2355,1.08e-19,1;DOID:0060058,5.26e-17,10;DOID:1240,1.92e-16,39;DOID:0050686,1.90e-12,137;DOID:74,1.57e-10,2;DOID:162,1.45e-08,235;DOID:14566,2.27e-08,239 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;3.06e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000945,5.54e-10,8;UBERON:0010039,5.54e-10,8;UBERON:0002106,3.16e-07,3;UBERON:0004854,3.16e-07,3;UBERON:0009034,3.16e-07,3;UBERON:0002095,3.16e-07,3;UBERON:0004782,3.16e-07,3;UBERON:0003281,3.16e-07,3;UBERON:0009664,3.16e-07,3;UBERON:0002296,3.16e-07,3;UBERON:0005602,3.16e-07,3;UBERON:0001179,3.16e-07,3;UBERON:0006293,3.16e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0,0.314843125254717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280660094433074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.731140468893853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24823305145179,0,0,0,1.84344458585075,2.46043718681657,1.16794399198336,0,0.278406173895242,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0.615424027305347,0,0.359473404589307,0,1.02314474045374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451191321234361,0.784250137270958,0.335643173951685,0,0.317873157960757,0,0.326465616318295,0,0,0,0,0,0,0,0,0,0,0,14.7788379264689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.39200360244947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.80602653484159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29859058098149,0,0,0.146552233678082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230467975111559,0,0,0,0,0,0,0,0,0,2.15927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09935271517422,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr19:29098175..29098195,+ | |||
}} |
Revision as of 22:32, 20 January 2014
Short description: | p@chr19:29098175..29098195, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_at_chr19:29098175..29098195, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B-1 B cell | 8.95e-20 | 1 |
mature B cell | 1.43e-10 | 2 |
pre-B-II cell | 1.43e-10 | 2 |
transitional stage B cell | 1.43e-10 | 2 |
small pre-B-II cell | 1.43e-10 | 2 |
immature B cell | 1.43e-10 | 2 |
precursor B cell | 1.82e-07 | 3 |
epithelial cell of stomach | 2.05e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
stomach | 5.54e-10 | 8 |
food storage organ | 5.54e-10 | 8 |
spleen | 3.16e-07 | 3 |
gastrointestinal system mesentery | 3.16e-07 | 3 |
stomach region | 3.16e-07 | 3 |
mesentery | 3.16e-07 | 3 |
gastrointestinal system serosa | 3.16e-07 | 3 |
mesentery of stomach | 3.16e-07 | 3 |
gut mesentery | 3.16e-07 | 3 |
dorsal mesentery | 3.16e-07 | 3 |
dorsal mesogastrium | 3.16e-07 | 3 |
peritoneal cavity | 3.16e-07 | 3 |
spleen primordium | 3.16e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 5.45e-28 | 51 |
immune system cancer | 5.45e-28 | 51 |
myeloid leukemia | 1.07e-20 | 31 |
lymphatic system cancer | 8.95e-20 | 1 |
lymphosarcoma | 8.95e-20 | 1 |
anemia | 1.08e-19 | 1 |
lymphoma | 5.26e-17 | 10 |
leukemia | 1.92e-16 | 39 |
organ system cancer | 1.90e-12 | 137 |
hematopoietic system disease | 1.57e-10 | 2 |
cancer | 1.45e-08 | 235 |
disease of cellular proliferation | 2.27e-08 | 239 |