FFCP PHASE1:Hg19::chr19:39916457..39916493,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64857 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=29515 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-81bp_to_AK095957_5end | |||
|description=CAGE_peak_8_at_PLEKHG2_5end | |||
|id=chr19:39916457..39916493,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.56e-10;33!CL:0002057;2.56e-10;33!CL:0000540;3.03e-09;6!CL:0000404;3.03e-09;6!CL:0000576;2.46e-07;48!CL:0000473;8.45e-07;39!CL:0000234;8.45e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,8.86e-12,42;CL:0002057,8.86e-12,42;CL:0000540,1.17e-09,6;CL:0000031,1.17e-09,6;CL:0000404,1.17e-09,6;CL:0000473,1.50e-09,48;CL:0000234,1.50e-09,48;CL:0000047,1.96e-09,8;CL:0002009,1.51e-08,61;CL:0002194,2.27e-07,59;CL:0000576,2.27e-07,59;CL:0000040,2.27e-07,59;CL:0000559,2.27e-07,59;CL:0000557,3.07e-07,67 | |||
|ontology_enrichment_development_v019=CL:0002057;1.95e-09;42!CL:0000031;3.03e-09;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.17e-07,76;UBERON:0001474,9.06e-07,82 | |||
|phase1_expression=0,1.92690471501885,0.281908808191942,0,0,1.74467704820074,0,0,0,0.491467873003018,1.39560233594486,0.218441372130172,0.263766978228454,0.37129905888014,0,1.34465029290355,0.602694528023977,0.730310090387373,0.487932798790507,0.369363174230364,0.612002073732759,1.25381888591235,0.572471974262113,1.36874425072884,0.753255837568817,0.229240217243854,0.328402357799783,0.472264687882075,0,0.767658796194425,0,0,0,0,0.232401601740905,0,0.293600439334847,0.553995408531877,14.6397446653203,13.0206522429511,0,0,0,1.16318591023652,0.755751887377619,0.242584061187816,2.55671940596253,3.28934310417461,0.619412741790207,2.8769239232215,2.30544635876191,0.47296445977717,0,0,0,2.25890807451126,2.18324920046277,0.449446968890169,1.83650335422542,0.320929027076094,1.91801137739712,1.31940520074686,1.39624560335142,3.83602275479425,2.90209238628584,1.13477044938228,0.622822248995575,4.27122730936464,6.25779502104242,0.434377689410233,1.21079900526674,1.47311054395026,0,0.211255286311942,1.27562579979026,0.209658645508376,0,0.150176892841506,0,0,0,0,0,0,0,0.426730222566507,0,0,0.661044872784862,0,0,0,2.29363936875137,0,0,0,0.393419540227666,3.14408610199332,0.616804496998528,0,0,0,0,0.111410456885174,0.294605907474837,0.221533894583621,0.270803863765016,1.66518715643378,0.780356085359269,1.15106533222573,0.829050053357545,0.869409257205157,0,0,0,0.113309342697566,0,0.34362744548263,0.759059076058509,0,0,0,0,0.127986611154418,0,0,0,0.604820229674197,3.20928234940209,0.868946423296794,7.31420598941885,0.670700859703636,0.12786256184353,2.1686349143074,0,0.579386075843295,0.795285947051099,0,1.13441780596881,0.665188192387692,1.40535657109002,0.392937226493138,0,0,0,0,0,0,0,0,0.198762407366705,0,0.347140501607594,0,0.419499436209906,1.37559020970034,0,0.516833518338658,0,1.00416183829401,0.402829317109147,0,1.70843440283719,0.367663080345869,0.81014194788176,0.17859945656816,0.22452937262617,0.225222960966644,0,0,0.183201743930407,1.31780417436063,0,0.436094052142534,0.496971951695318,0.379891534993739,0.397227542439656,1.14734648299525,1.06400514659507,0.560677600142307,1.06748995729705,0.74000264525148,0,0.538842688278752,0.326923806226917,0.151357427644931,1.15235184896,0,0,0,0.896692083310806,0,0.161872944368132,0.140450806702248,0.204154171254893,0.737005903870608,0.103325781175765,0,0.494533858557114,0,0.718618141816238,0,0.375355559615893,0,0.438977620880838,0.612975591598039,0.150238058906597,0.226864366320042,2.33206526395521,0,0.423863802319124,1.20036438433761,0.103052529238439,1.28820270022815,0.37223371266318,1.18143432568886,0.292311015483596,1.51460264546469,0.184099797284599,0.484938170456436,1.06502877754984,0.201504196455281,0.508681776931463,0,0,0,0.609868530647977,1.06023814657188,1.2781333715647,0.414644220061482,0.252320850875628,1.45990943630332,0,1.28648187638577,0,0.928735856063958,0,0,0,0,0.110293972732394,0,0,0.269662616320329,0,0,0,0,0.4115740113314,1.47008711385542,0,0,1.18157981336281,0.882926198829301,0.491953754172454,0.171567810298526,0.548751427043128,0,0.301586917234893,0,0.325808305310325,0,1.44331342025273,1.04337364477569,0.117408694235822,0.433099343283221,0.462985512576611,0.570762456703795,0,0,0.246217006087397,0,0,0,0.16798212819886,0,0.179117045405697,0.290633938513962,0,0,0,0,0,0,0.126995788584338,0.381988425558278,0,0,0.102827492703324,0.901029173531752,0.285826432630578,0.224262168690721,0.43596006883328,0.8800594298514,0.129271715757778,0,0,1.06375246633948,1.04007436911366,1.02882949704857,0,0.266422179016099,0.714889968290738,2.17048642156577,0,0,0.355391948742546,0,0.301439377059586,0,0.399891964728228,0,0,0,0.718874566474748,0,0,0,1.2328579353023,0.537182889719687,0.560425719967636,0.394061520403854,1.50939302401662,1.41177339907723,1.77866236955724,0,4.63973287666617,1.50764638800914,7.65526501983796,0,2.99161459204025,0,0.49076596687656,0.500170521059677,0.813795071099207,4.57535895367776,2.67643483195743,2.20783381047509,1.7571212248907,0,0,0,0.664225598535437,0.184369168541703,0.173767228936166,0.587403472388222,0,0.413536052245775,0.647142602455851,1.81436848265855,0,0,0.30239029332968,0,0.61384789315225,0.561320188866147,0.384417447767103,0,0.64341568457443,1.48418066444991,0.462629081407967,0.355123450626254,0.328508624055237,1.03850885836724,0.116210378459959,0.362578348774867,1.00253235151642,0.368323955743585,0.34444334449382,1.45672934405374,0.393373244878272,0.451199612907412,0.0770153371044148,0,1.46139224653261,0.316654886678627,1.13733384070897,0.170093705276516,1.94324324491925,1.54227252690289,0,0.501689773854853,0,0,0.447749509444357,0,0,0,0.656029291399411,0,0.103041011647722,0.0915694648183434,0.247528499761764,0,0.650060246036521,0,0.48335359146061,0.308097234229289,0,0.275673144969061,0.537101224341368,0.145016693914229,0.170453254832202,1.24644849905432,0.165284915360978,0.384380134730212,0.255225424989168,0.2023155617111,0.464845549297286,0.62962469366128,0,0,0,0,0.18532421910392,0,0,0.316379424718726,0.190630193923825,0,0,0,0,0.35974491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| |||
|short_description=p8@PLEKHG2 | |||
}} |
Revision as of 23:15, 20 January 2014
Short description: | p8@PLEKHG2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_PLEKHG2_5end |
Coexpression cluster: | NA |
Association with transcript: | -81bp_to_AK095957_5end |
EntrezGene: | PLEKHG2 |
HGNC: | 29515 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 8.86e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.86e-12 | 42 |
neuron | 1.17e-09 | 6 |
neuroblast | 1.17e-09 | 6 |
electrically signaling cell | 1.17e-09 | 6 |
defensive cell | 1.50e-09 | 48 |
phagocyte | 1.50e-09 | 48 |
neuronal stem cell | 1.96e-09 | 8 |
macrophage dendritic cell progenitor | 1.51e-08 | 61 |
monopoietic cell | 2.27e-07 | 59 |
monocyte | 2.27e-07 | 59 |
monoblast | 2.27e-07 | 59 |
promonocyte | 2.27e-07 | 59 |
granulocyte monocyte progenitor cell | 3.07e-07 | 67 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.17e-07 | 76 |
bone element | 9.06e-07 | 82 |