FFCP PHASE1:Hg19::chr19:50434005..50434020,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22809 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=790 | |||
|TSSclassifier=strong | |||
|UniProt=Q9Y2D1 | |||
|association_with_transcript=-37bp_to_AF305687_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_10_at_ATF5_5end | |||
|id=chr19:50434005..50434020,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000182;3.17e-11;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.09e-11,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.89e-07;11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0050619;3.00e-09;1!DOID:3371;3.00e-09;1!DOID:4549;3.00e-09;1!DOID:5861;3.00e-09;1!DOID:6496;3.00e-09;1!DOID:1357;3.00e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,4.15e-09,1;DOID:1357,4.15e-09,1;DOID:3371,4.50e-09,1;DOID:4549,4.50e-09,1;DOID:5861,4.50e-09,1;DOID:6496,4.50e-09,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.96e-15;19!UBERON:0006925;2.96e-15;19!UBERON:0002423;1.78e-11;25!UBERON:0001764;3.00e-09;1!UBERON:0001825;3.00e-09;1!UBERON:0002365;3.33e-09;31!UBERON:0002330;3.33e-09;31!UBERON:0002368;6.86e-08;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.89e-15,19;UBERON:0006925,2.89e-15,19;UBERON:0008836,2.89e-15,19;UBERON:0008835,4.06e-13,22;UBERON:0003894,4.06e-13,22;UBERON:0009854,1.59e-12,23;UBERON:0007499,1.75e-11,25;UBERON:0009497,1.75e-11,25;UBERON:0000015,1.75e-11,25;UBERON:0002423,1.75e-11,25;UBERON:0006235,1.75e-11,25;UBERON:0004161,1.75e-11,25;UBERON:0009856,5.06e-11,26;UBERON:0002365,3.67e-09,31;UBERON:0002330,3.67e-09,31;UBERON:0001764,4.15e-09,1;UBERON:0001825,4.15e-09,1;UBERON:0002368,4.70e-08,35;UBERON:0002417,1.20e-07,60;UBERON:0000916,1.20e-07,60 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.986680828671798,1.0007329835313,0.893922188854576,0,0,0.631719873426831,0.261185628199839,0,0,0,0,0,0,0,0,0,0.975865597581014,0,0,0.313454721478088,0,0,0,0.229240217243854,0.164201178899891,0.472264687882075,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0.581592955118259,0,0.485168122375632,0.929716147622738,0.822335776043652,0.309706370895104,0,0.256160706529101,0.236482229888585,0.344745680736619,0,0,0.188242339542605,0.545812300115692,0.224723484445085,0.306083892370903,0.320929027076094,0.639337125799041,0.329851300186716,0.398927315243264,0,0,0.56738522469114,0.622822248995575,0.502497330513487,0,0.217188844705117,0.605399502633369,0.368277635987565,0.316462387440884,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0.0945348171640679,0,0.175669571386252,0.261958150995425,0,0,0,0.174129737299267,0.26591592103773,0.238490624305342,0,0,0,0,0,0,0,0,0.417989933073621,0,0,0,0,0,0,0.367663080345869,0,0,0,0.112611480483322,1.53316637465883,0,0.183201743930407,0,0,0,0,0.25326102332916,0,0,0.709336764396714,0,0,0,0,0,0,0,0,0.468642863667593,0.312160076830321,0,0.149448680551801,0,0,0,0,0,0,0,0,0.910161361938026,0,0,0,0,0,0,0,0,0.179389635688862,0.213557388818567,0,0,0,0.257640540045629,0,0,0.0974370051611986,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0.116193942869518,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,6.33775174109154,10.8110993834539,5.90789906681404,0,0,0,0.109750285408626,0,0,0,0.325808305310325,0,1.44331342025273,0,0,0,0,0.190254152234598,0,0,0.492434012174795,0,0,0,0,0,0,0,0,1.47798971368783,0,0.207328115540772,0,0.12624243342638,0,0.381988425558278,0,0,0.102827492703324,0,0.285826432630578,0.112131084345361,0,0.07333828582095,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,2.10833939483032,0.239624855491583,0,0,0.144781306667579,0.205476322550383,0,0.112085143993527,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0.271265023699736,0,0,0,0,0.300946099727719,0,1.03473071292505,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0.496215615637554,0.153461973288062,0.280660094433074,0.128139149255701,0,0.321707842287215,0,0,0.177561725313127,0,0.519254429183621,0,0,0.200506470303285,0,0,0,0.131124414959424,0,0.0770153371044148,0,0,0,0,0.510281115829547,0.215915916102139,1.54227252690289,0,0,0.254876273045038,0,0,0,0,0,0,0,1.64865618636356,0.0915694648183434,0,0,0,0,1.54673149267395,0.308097234229289,0,0,0,0,0.0852266274161009,0.356128142586949,0,0.192190067365106,0,0.2023155617111,0.929691098594572,0.31481234683064,0,0,0,0,0.18532421910392,0.143124886741991,0,0,0,0,0,0,0,0.179872457583315,0,0,0.202182481573316,0,0,0.48763373908959,0,0,0.136499911407986,0.424216295861138,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0,0,0.422215270595328,0.329294892959902,0,0,0,0,0,1.60044461320525,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0.106824071127473,0,0,0.557409525377156,0.721346064882224,0.569134746787313,0,0,0,0.635020748171649,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0.166849141711909,0,0,0,0.270455678475983,0,1.4098700508785,0,0.293016358543788,0.121360521749513,0.111443384277478,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0.251932747854276,0,0.615424027305347,0,0,0.358042349351218,1.02314474045374,0.0986434056369336,0,0,0,0.185536196323703,0,0,0.0874599999961957,0,0,0,0.236387681767936,0.344743373241465,0.291604613383254,0.520874984799877,0,0,1.52581736317083,0,0,0,0.32681539055697,0.278847488557207,0.0769502585037971,0.113942055847001,0,0.0897576444097721,0.108647371922008,0,0,0,0,0.156980256395025,0,0,0.19606253431774,0,0,0.158936578980379,0,0,0,0,0,0.265372693510018,0.611030144933625,0,0,0.104421949505455,0,0,0,0.91227394607833,0,0.485560759068186,0,0,0,0,0.300646838828985,0,0,0,0,0,0,0,0.173559738335131,0,0,0.17472666824203,0,0,0,0.164230914106418,0.193978032976839,1.059073520298,0,0,0,0,0,0,0.213452994739353,0,0.72045208577053,0,2.9171149636534,0,0.99402028452346,0,0,0.104602846312333,0,0.288950589901519,0,0.273810757783986,0,0.859530882839914,0.262887354279314,0,0,0,0.199679000498991,0,0,0,0,0,0,0.0824158583811665,0.0674035438541849,1.47641222272123,0.0846733320657845,0,0,0,0.137539436597234,0,0,0,0,0,0.157611414598396,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,12.0172831616028,3.97520666736664,0.129282956361551,0,0,0,0,0,0,0,0.395223263795889,0,0.638341257770182,0,0.5013797880454,0,0.327872630709804,1.09937867375164,0,0,0,0,0,0.124192805882767,0.276697269872462,0,0.454947352624943,0,0,0.468334905806882,0,0.149254802886874,0.467426619694449,0.554805861502613,0,0,0,0.457680136793847,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0.398095888698616,0,0.686791410365586,0.673498977531838,0,0.192619830407303,0.428883182749851,0,0,0,0.489473409012935,0.179088841081487,0,0.219284049578707,0.353378291891762,0,0,0,0,0,0,1.16916185303633,0.265729680626726,0,0,0,0.211312123358627,0.19998739585493,0,0,0,0,0,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| |||
|short_description=p10@ATF5 | |||
}} |
Revision as of 00:36, 21 January 2014
Short description: | p10@ATF5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_ATF5_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -37bp_to_AF305687_5end |
EntrezGene: | ATF5 |
HGNC: | 790 |
UniProt: | Q9Y2D1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.09e-11 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 2.89e-15 | 19 |
digestive gland | 2.89e-15 | 19 |
liver bud | 2.89e-15 | 19 |
hepatic diverticulum | 4.06e-13 | 22 |
liver primordium | 4.06e-13 | 22 |
digestive tract diverticulum | 1.59e-12 | 23 |
epithelial sac | 1.75e-11 | 25 |
epithelium of foregut-midgut junction | 1.75e-11 | 25 |
anatomical boundary | 1.75e-11 | 25 |
hepatobiliary system | 1.75e-11 | 25 |
foregut-midgut junction | 1.75e-11 | 25 |
septum transversum | 1.75e-11 | 25 |
sac | 5.06e-11 | 26 |
exocrine gland | 3.67e-09 | 31 |
exocrine system | 3.67e-09 | 31 |
maxillary sinus | 4.15e-09 | 1 |
paranasal sinus | 4.15e-09 | 1 |
endocrine gland | 4.70e-08 | 35 |
abdominal segment of trunk | 1.20e-07 | 60 |
abdomen | 1.20e-07 | 60 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 4.15e-09 | 1 |
maxillary sinus cancer | 4.15e-09 | 1 |
chondrosarcoma | 4.50e-09 | 1 |
extraosseous chondrosarcoma | 4.50e-09 | 1 |
myxoid chondrosarcoma | 4.50e-09 | 1 |
extraskeletal myxoid chondrosarcoma | 4.50e-09 | 1 |