FFCP PHASE1:Hg19::chr2:135011682..135011693,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4249 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7049 | |||
|TSSclassifier=not | |||
|UniProt=Q09328 | |||
|association_with_transcript=-136bp_to_ENST00000281923,NM_002410,uc002ttv.1_5end | |||
|coexpression_cluster_id=C179 | |||
|description=CAGE_peak_13_at_MGAT5_5end | |||
|id=chr2:135011682..135011693,+ | |||
|ontology_enrichment_celltype=CL:0000236!3.25e-29!14;CL:0000945!6.02e-27!24;CL:0000826!6.02e-27!24;CL:0000838!1.31e-12!52;CL:0000842!1.57e-12!3;CL:0000542!2.60e-12!53;CL:0000051!2.60e-12!53;CL:0000224!1.63e-09!4;CL:0002087!8.04e-09!119;CL:0000738!1.05e-08!140;CL:0000037!5.97e-07!172;CL:0000566!5.97e-07!172 | |||
|ontology_enrichment_celltype_v019=CL:0000236;5.36e-80;13!CL:0000945;8.28e-43;24!CL:0000542;6.91e-16;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,1.81e-74,14;CL:0000945,5.83e-43,24;CL:0000826,5.83e-43,24;CL:0000838,3.87e-19,52;CL:0000542,9.41e-19,53;CL:0000051,9.41e-19,53;CL:0002087,8.28e-08,115;CL:0000738,8.42e-08,136;CL:0002031,2.00e-07,120 | |||
|ontology_enrichment_development_v019=CL:0000051;6.91e-16;53!UBERON:0001045;1.13e-11;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!4.98e-16!15;UBERON:0000179!4.98e-16!15;UBERON:0000463!4.98e-16!15;UBERON:0007023!6.20e-10!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0002372;1.13e-11;1!UBERON:0001154;1.13e-11;1!UBERON:0001153;1.13e-11;1!UBERON:0009854;1.13e-11;1!UBERON:0001961;1.13e-11;1!UBERON:0001744;1.13e-11;1!UBERON:0001042;1.13e-11;1!UBERON:0001735;1.13e-11;1!UBERON:0000178;9.45e-07;15!UBERON:0000179;9.45e-07;15!UBERON:0000463;9.45e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002372,8.64e-12,1;UBERON:0001961,8.64e-12,1;UBERON:0001744,8.64e-12,1;UBERON:0001735,8.64e-12,1;UBERON:0001154,1.63e-11,1;UBERON:0001153,1.63e-11,1;UBERON:0001045,1.63e-11,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.92960640696362,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.73069305631066,2.66852776159066,2.98711155796555,2.00197993518006,5.17277195959035,1.98313461835459,1.90810750907073,10.8150464130795,5.28513470433845,4.58727873750275,1.32171328579026,0,0,0,0,0,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0.215714200818617,0.640365346820666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0.476463550915578,1.23408681925858,1.29694662238543,1.08006287447623,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10513566212459,0,0,0.123084805461069,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290967049465258,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0.209818352539992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860454717640555,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,3.29222107453066,0,0,0,0,0,0,1.2217909337381,0.773494655682926,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0.0636471582781649,0,0,0,1.88585748440845,0.430333232356058,0,0,0,0,0,0,0,0,0,0.402547587182052,0.320568492303233 | |||
|short_description=p13@MGAT5 | |||
}} |
Revision as of 05:30, 21 January 2014
Short description: | p13@MGAT5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_MGAT5_5end |
Coexpression cluster: | C179_CD19_Peripheral_lymphoma_blood_lymph_spleen_tonsil |
Association with transcript: | -136bp_to_ENST00000281923, NM_002410, uc002ttv.1_5end |
EntrezGene: | MGAT5 |
HGNC: | 7049 |
UniProt: | Q09328 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 1.81e-74 | 14 |
lymphocyte of B lineage | 5.83e-43 | 24 |
pro-B cell | 5.83e-43 | 24 |
lymphoid lineage restricted progenitor cell | 3.87e-19 | 52 |
lymphocyte | 9.41e-19 | 53 |
common lymphoid progenitor | 9.41e-19 | 53 |
nongranular leukocyte | 8.28e-08 | 115 |
leukocyte | 8.42e-08 | 136 |
hematopoietic lineage restricted progenitor cell | 2.00e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
tonsil | 8.64e-12 | 1 |
mucosa-associated lymphoid tissue | 8.64e-12 | 1 |
lymphoid tissue | 8.64e-12 | 1 |
tonsillar ring | 8.64e-12 | 1 |
vermiform appendix | 1.63e-11 | 1 |
caecum | 1.63e-11 | 1 |
midgut | 1.63e-11 | 1 |