FFCP PHASE1:Hg19::chr2:176994919..176994931,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3234 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5139 | |||
|TSSclassifier=strong | |||
|UniProt=F8VSA3 | |||
|association_with_transcript=-121bp_to_ENST00000548663_5end | |||
|description=CAGE_peak_2_at_HOXD8_5end | |||
|id=chr2:176994919..176994931,+ | |||
|ontology_enrichment_celltype=CL:0002078!2.28e-08!44;CL:0002620!5.86e-08!23;CL:0002139!1.11e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0002559;2.69e-11;5!CL:0002139;1.00e-10;24!CL:0002078;3.43e-09;45!CL:0002138;6.94e-09;6!CL:0000115;2.18e-08;36!CL:0002144;3.05e-08;3!CL:0002681;6.36e-08;12!CL:0002584;6.36e-08;12!CL:0000346;9.87e-08;3!CL:1000428;9.87e-08;3!CL:0000239;7.45e-07;3!CL:1000615;7.45e-07;3!CL:0002580;7.45e-07;3!CL:0002306;7.45e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002078,9.71e-13,45;CL:0002559,1.54e-11,5;CL:0002139,9.31e-11,24;CL:0000115,2.08e-10,36;CL:0005020,6.97e-09,6;CL:0002138,6.97e-09,6;CL:0005022,6.97e-09,6;CL:0002144,2.91e-08,3;CL:0002681,4.25e-08,12;CL:0002584,4.25e-08,12;CL:0000346,5.94e-08,3;CL:1000428,5.94e-08,3;CL:0000213,6.48e-07,58;CL:0000215,6.48e-07,58;CL:0000239,8.61e-07,3;CL:1000615,8.61e-07,3;CL:0002306,8.61e-07,3;CL:0002580,9.55e-07,3 | |||
|ontology_enrichment_development_v019=CL:0005022;6.94e-09;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002199!1.96e-12!45;UBERON:0002416!1.96e-12!45;UBERON:0002097!1.59e-11!40;UBERON:0003133!4.23e-08!48;UBERON:0002465!4.95e-08!10;UBERON:0000489!6.03e-08!32;UBERON:0001473!1.40e-07!8;UBERON:0004536!1.40e-07!8;UBERON:0006558!1.40e-07!8;UBERON:0009569!2.05e-07!113;UBERON:0002113!2.84e-07!27;UBERON:0003918!2.84e-07!27;UBERON:0005095!2.84e-07!27;UBERON:0007687!2.84e-07!27;UBERON:0002067!6.67e-07!9;UBERON:0004016!6.67e-07!9;UBERON:0010083!6.67e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002073;2.69e-11;5!UBERON:0005904;3.57e-10;4!UBERON:0001473;1.90e-09;8!UBERON:0004536;1.90e-09;8!UBERON:0006558;1.90e-09;8!UBERON:0010523;3.05e-08;3!UBERON:0001915;3.05e-08;3!UBERON:0001982;3.05e-08;3!UBERON:0006947;5.87e-08;3!UBERON:0004054;5.87e-08;3!UBERON:0001225;6.36e-08;12!UBERON:0008987;6.36e-08;12!UBERON:0000412;9.87e-08;3!UBERON:0001992;9.87e-08;3!UBERON:0002465;2.16e-07;10!UBERON:0002113;3.67e-07;24!UBERON:0011143;3.67e-07;24!UBERON:0000991;5.53e-07;21!UBERON:0003135;6.65e-07;11!UBERON:0006853;7.45e-07;3!UBERON:0007685;7.45e-07;3!UBERON:0004134;7.45e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002073,1.54e-11,5;UBERON:0005086,1.54e-11,5;UBERON:0005904,2.75e-10,4;UBERON:0002113,7.21e-10,26;UBERON:0003918,7.21e-10,26;UBERON:0011143,7.21e-10,26;UBERON:0005095,7.21e-10,26;UBERON:0007687,7.21e-10,26;UBERON:0001473,1.97e-09,8;UBERON:0004536,1.97e-09,8;UBERON:0006558,1.97e-09,8;UBERON:0010523,2.91e-08,3;UBERON:0001915,2.91e-08,3;UBERON:0001982,2.91e-08,3;UBERON:0001225,4.25e-08,12;UBERON:0008987,4.25e-08,12;UBERON:0006947,4.62e-08,3;UBERON:0004054,4.62e-08,3;UBERON:0000412,5.94e-08,3;UBERON:0001992,5.94e-08,3;UBERON:0000489,8.10e-08,31;UBERON:0003133,8.29e-08,48;UBERON:0006555,1.06e-07,16;UBERON:0004819,1.06e-07,16;UBERON:0004876,2.00e-07,11;UBERON:0002465,2.22e-07,10;UBERON:0000991,3.60e-07,21;UBERON:0009196,3.60e-07,21;UBERON:0009117,3.60e-07,21;UBERON:0005564,3.60e-07,21;UBERON:0003135,3.94e-07,11;UBERON:0006853,8.61e-07,3;UBERON:0007685,8.61e-07,3;UBERON:0004134,8.61e-07,3;UBERON:0004176,9.25e-07,22 | |||
|phase1_expression=2.72517568905835,2.5692062866918,0.281908808191942,3.00219895059391,0.446961094427288,0.872338524100369,0,0.631719873426831,0.261185628199839,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,0,0.724232594804119,0.795285947051099,1.45990461090791,0,0,0,2.68507104770311,0,0,0,0,0,0,0,0,0,0,0,0,0,0.550236083880135,0,2.58416759169329,1.42306505074684,2.34304428935269,3.62546385398232,8.36299316290364,8.7862340717341,1.83831540172934,2.43042584364528,0.535798369704479,1.12264686313085,0.900891843866578,0,3.79706263827252,0.183201743930407,0,0,0.436094052142534,1.49091585508596,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0.570471821544449,0.597794722207204,0.822041490506354,1.13311061057692,0.702254033511242,0,0,0,0,0.247266929278557,0.910161361938026,4.31170885089743,0,0,0,0,0,0,0,0.717558542755448,0.85422955527427,0.847727604638247,0.600182192168805,0.721367704669072,0,1.11670113798954,0.843881661206331,0.779496041289589,0.252433774244115,0.828449087780694,0,0.710019185033229,1.91428986632517,0,0,0,0,0,0,0,0,0,0,6.25798129319264,1.92972281457866,8.28809528114883,2.3218396401599,1.44375896333917,0,0,0,0,0,0.237270619111097,0,0.196221465125346,0.38474715694639,0,0,0.4115740113314,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721832238805369,1.38895653772983,2.09279567458058,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0.317489471460845,0.763976851116555,0,0,0,0,0.571652865261156,0,0,0,0.387815147273333,3.57656445851882,0.845302752556,3.19125739901845,1.04007436911366,0.771622122786426,0,0.266422179016099,0,0,0,0.65147236858747,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.70851489754947,2.27407504055985,1.03473071292505,0.664225598535437,5.7154442247928,0,0,0,0,0,0,0,0,0,1.48864684691266,1.07423381301644,2.52594084989766,0.256278298511402,0.511707249066704,0,0,0.154209693802656,1.24293207719189,0.98552587216571,0,0.581051892299796,0,0.200506470303285,0.0920809889358963,0,0,0,1.80479845162965,0.231046011313244,0,0,0,9.09867072567173,0.680374821106063,1.94324324491925,3.08454505380579,0.270946437543853,0,2.29388645740534,1.66215201785745,1.11937377361089,0,0,0,0,0,0.206082023295445,0.0915694648183434,0.082509499920588,0.574265537996172,0,6.42735719376638,0.676695028044854,0.308097234229289,0.15350367472613,0.275673144969061,0,0,0.426133137080504,0.534192213880424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0.487426979262569,0,0,0,0,0,0,0,0,0,0,0,0,0.286822704408103,0.0982490410131212,0,0,1.47775344708365,0.329294892959902,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17206543417515,0.242721043499027,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0,0.503865495708552,0,0,0,0,0,0,0.591860433821602,0,1.11136990144637,0,0,0,0.260427761085233,0,0.724999575434793,0,0,20.8021159955784,0,0.874813840149763,0,0,0,0,0,0,0,0,0.557694977114413,1.46205491157214,0,0,0,0,0.638002319463839,0.824378340616761,0,0,0,0,0,0,0,0,0,0,0.816164040795739,0,0.216388639742091,0.995261931078505,0.707660516026713,1.22206028986725,0,0,0,0,0,0,0,0,0,2.76209081994573,1.20990716048664,0,0.31593289814244,1.35291077473043,0.933193722575224,0,0,0,0,0.284609546029793,0.970722711091971,0,0.195984794828755,0.174118413160805,14.5023134640885,0.687944129886466,0,0,0,0.193978032976839,3.35373281427701,0.451961481561065,0.137041924646751,0.596143835108969,0,0,0,1.06726497369676,0,0,0,0,0,0,0.471388069233591,1.35904206073614,0.836822770498666,1.4279750469085,0.288950589901519,0,0,0,0,0,0,0,0,0.399358000997982,0,0.223171457441873,0.0671834724867263,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335434687599266,4.4131196087551,5.08809504909482,0,0.179287339332845,0.959575986597226,0,0,0,0,0,0,0,0,1.5334921960688,1.35974509824151,0,0,0,0,0.171086837884329,0,0.106787412567695,0,0.414239055347196,0.496166021811951,0,0,1.27668251554036,0,0.7520696820681,0.612691153526923,0.327872630709804,1.25643277000187,0,0,0,0,0,0,0,0,1.51649117541648,0.856396000634902,0,1.40500471742064,0.28984205722165,0.74627401443437,0.701139929541673,1.10961172300523,0.189403005275089,0,0,0,0,0,0,0.477890301491107,1.79921244865442,0,2.07353103920428,0,5.21745061811734,0,0.380805212168795,0,0.909243296012797,0.214821114084977,2.32016879939247,3.98095888698616,0,0.686791410365586,1.34699795506368,1.26184898228651,0.57785949122191,0,0,0,0.694567422971502,0.244736704506468,0,0.617602894321944,0.219284049578707,0,0.192914038270915,0,0,0,0,0,0,0,0,0.982829546539238,0,0,0,0,0,0,0.552317850755522,0,0,0.639471856518258,0.970423302570136,4.560712313821,1.20130602011215,0.169732529954025,0.850299680406731,0.619678821295011,1.67593475391973,0.636008701306837,0,3.20228299314188,0,0,0,0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| |||
|short_description=p2@HOXD8 | |||
}} |
Revision as of 06:46, 21 January 2014
Short description: | p2@HOXD8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_HOXD8_5end |
Coexpression cluster: | NA |
Association with transcript: | -121bp_to_ENST00000548663_5end |
EntrezGene: | HOXD8 |
HGNC: | 5139 |
UniProt: | F8VSA3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
meso-epithelial cell | 9.71e-13 | 45 |
hair follicle cell | 1.54e-11 | 5 |
endothelial cell of vascular tree | 9.31e-11 | 24 |
endothelial cell | 2.08e-10 | 36 |
lymphangioblast | 6.97e-09 | 6 |
endothelial cell of lymphatic vessel | 6.97e-09 | 6 |
vascular lymphangioblast | 6.97e-09 | 6 |
capillary endothelial cell | 2.91e-08 | 3 |
kidney cortical cell | 4.25e-08 | 12 |
renal cortical epithelial cell | 4.25e-08 | 12 |
hair follicle dermal papilla cell | 5.94e-08 | 3 |
stem cell of epidermis | 5.94e-08 | 3 |
lining cell | 6.48e-07 | 58 |
barrier cell | 6.48e-07 | 58 |
brush border epithelial cell | 8.61e-07 | 3 |
kidney cortex tubule cell | 8.61e-07 | 3 |
epithelial cell of proximal tubule | 8.61e-07 | 3 |
preadipocyte of the breast | 9.55e-07 | 3 |