FFCP PHASE1:Hg19::chr2:228382337..228382369,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C981 | |||
|description=CAGE_peak_at_chr2:228382337..228382369,+ | |||
|id=chr2:228382337..228382369,+ | |||
|ontology_enrichment_celltype=CL:0002541!1.20e-09!3;CL:0000167!1.95e-07!1;CL:0000164!1.95e-07!1;CL:0000502!1.95e-07!1;CL:0000172!1.95e-07!1;CL:0000173!1.95e-07!1;CL:0002351!1.95e-07!1;CL:1001319!4.34e-07!1;CL:1000600!4.34e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0002541;2.19e-53;3!CL:0000039;1.44e-23;7!CL:0000586;1.44e-23;7!CL:0000083;3.42e-11;4!CL:0000349;2.17e-09;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,2.19e-53,3;CL:0000039,1.44e-23,7;CL:0000586,1.44e-23,7;CL:0000083,3.42e-11,4;CL:0000349,2.17e-09,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1799!8.00e-08!1;DOID:10165!8.00e-08!1;DOID:1798!8.00e-08!1;DOID:4430!1.95e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:1799;2.21e-40;1!DOID:10165;2.21e-40;1!DOID:1798;2.21e-40;1!DOID:1793;3.42e-11;4!DOID:3095;3.15e-08;22!DOID:2994;3.15e-08;22!DOID:170;6.78e-08;6 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,2.21e-40,1;DOID:10165,2.21e-40,1;DOID:1798,2.21e-40,1;DOID:1793,3.42e-11,4;DOID:3095,3.15e-08,22;DOID:2994,3.15e-08,22;DOID:170,6.78e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0000476!1.20e-09!3;UBERON:0000920!1.20e-09!3;UBERON:0000478!6.17e-09!24;UBERON:0005418!1.03e-07!1;UBERON:0001389!1.03e-07!1;UBERON:0000026!1.03e-07!1;UBERON:0008784!1.03e-07!1;UBERON:0006058!1.03e-07!1;UBERON:0003663!1.03e-07!1;UBERON:0001383!1.03e-07!1;UBERON:0004256!1.03e-07!1;UBERON:0002529!1.03e-07!1;UBERON:0004708!1.03e-07!1;UBERON:0002101!1.03e-07!1;UBERON:0004709!1.03e-07!1;UBERON:0003661!1.03e-07!1;UBERON:0002471!1.03e-07!1;UBERON:0004357!1.03e-07!1;UBERON:0009872!1.03e-07!1;UBERON:0004347!1.03e-07!1;UBERON:0005420!1.03e-07!1;UBERON:0005732!1.03e-07!1;UBERON:0006057!1.03e-07!1;UBERON:0000978!1.03e-07!1;UBERON:0002103!1.03e-07!1;UBERON:0001665!1.03e-07!1;UBERON:0003823!1.03e-07!1;UBERON:0000154!1.03e-07!1;UBERON:0005733!1.03e-07!1;UBERON:0005730!1.03e-07!1;UBERON:0005631!1.66e-07!14;UBERON:0000158!1.66e-07!14;UBERON:0006834!2.83e-07!1;UBERON:0001282!3.01e-07!1;UBERON:0009842!3.01e-07!1;UBERON:0003704!3.01e-07!1;UBERON:0001171!3.01e-07!1;UBERON:0001172!3.01e-07!1;UBERON:0004645!4.34e-07!1;UBERON:0001256!4.34e-07!1;UBERON:0001259!4.34e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;2.19e-53;3!UBERON:0000920;2.19e-53;3!UBERON:0005631;6.93e-17;10!UBERON:0000158;6.93e-17;10!UBERON:0000478;1.23e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,2.19e-53,3;UBERON:0003124,1.28e-23,7;UBERON:0005631,2.24e-12,14;UBERON:0000158,2.24e-12,14;UBERON:0000478,1.23e-07,24 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71623345421307,0,0.614321404198464,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511572370226872,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,1.38338342632836,8.79624915215767,0,7.01802551410223,0,4.26427820814908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593042257361244,0,0.104421949505455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265729680626726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.09525355585138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235676547101626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p@chr2:228382337..228382369,+ | |||
}} |
Revision as of 09:01, 21 January 2014
Short description: | p@chr2:228382337..228382369, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:228382337..228382369, + |
Coexpression cluster: | C981_choriocarcinoma_chorionic_pancreatic_placenta_amniotic_vagina_MCF7 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 2.19e-53 | 3 |
germ line cell | 1.44e-23 | 7 |
germ cell | 1.44e-23 | 7 |
epithelial cell of pancreas | 3.42e-11 | 4 |
extraembryonic cell | 2.17e-09 | 19 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 2.19e-53 | 3 |
chorion | 1.28e-23 | 7 |
extraembryonic membrane | 2.24e-12 | 14 |
membranous layer | 2.24e-12 | 14 |
extraembryonic structure | 1.23e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 2.21e-40 | 1 |
endocrine pancreas cancer | 2.21e-40 | 1 |
pancreatic endocrine carcinoma | 2.21e-40 | 1 |
pancreatic cancer | 3.42e-11 | 4 |
germ cell and embryonal cancer | 3.15e-08 | 22 |
germ cell cancer | 3.15e-08 | 22 |
endocrine gland cancer | 6.78e-08 | 6 |