FFCP PHASE1:Hg19::chr20:50418947..50418964,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57167 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15924 | |||
|TSSclassifier=strong | |||
|UniProt=Q6Y8G5 | |||
|association_with_transcript=0bp_to_ENST00000371539_5end | |||
|description=CAGE_peak_4_at_SALL4_5end | |||
|id=chr20:50418947..50418964,- | |||
|ontology_enrichment_celltype=CL:0000039!1.31e-15!7;CL:0000586!1.31e-15!7;CL:0002322!2.38e-12!5;CL:0000148!5.52e-10!10;CL:0000541!5.52e-10!10;CL:0000066!4.79e-07!254;CL:0002504!7.22e-07!3;CL:1000279!7.22e-07!3;CL:1000280!7.22e-07!3;CL:0000147!8.70e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0002322;1.38e-33;5!CL:0000039;2.45e-33;7!CL:0000586;2.45e-33;7!CL:0002321;4.19e-11;15!CL:0000540;4.46e-11;6!CL:0000404;4.46e-11;6!CL:1001319;8.12e-08;1!CL:1000600;8.12e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,7.79e-34,5;CL:0000039,3.88e-33,7;CL:0000586,3.88e-33,7;CL:0000540,4.46e-11,6;CL:0000031,4.46e-11,6;CL:0000404,4.46e-11,6;CL:0000047,2.02e-08,8;CL:1001319,8.69e-08,1;CL:1000600,8.69e-08,1 | |||
|ontology_enrichment_development_v019=CL:0000031;4.46e-11;6 | |||
|ontology_enrichment_disease=DOID:3095!6.79e-14!22;DOID:2994!6.79e-14!22;DOID:0050687!4.62e-08!143;DOID:3119!7.40e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:3095;7.97e-14;22!DOID:2994;7.97e-14;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,9.00e-14,22;DOID:2994,9.00e-14,22;DOID:0050687,1.18e-08,143 | |||
|ontology_enrichment_uberon=UBERON:0003886!2.33e-11!63;UBERON:0002553!1.02e-10!70;UBERON:0005409!1.83e-09!35;UBERON:0004458!2.31e-09!49;UBERON:0000473!2.33e-09!8;UBERON:0002323!6.35e-09!46;UBERON:0000466!4.05e-08!126;UBERON:0000160!6.38e-08!27;UBERON:0000464!1.94e-07!104 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;6.03e-08;8!UBERON:0004645;8.12e-08;1!UBERON:0001256;8.12e-08;1!UBERON:0001259;8.12e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,6.73e-08,8;UBERON:0004645,8.69e-08,1;UBERON:0001256,8.69e-08,1;UBERON:0001259,8.69e-08,1 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0,0.491467873003018,0.697801167972428,0,0,0,0,0,0,0,0,0.123121058076788,0,0.313454721478088,0.572471974262113,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0.926864265692532,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,2.80539524098069,5.96383957446684,2.90484857173796,1.96956004529204,2.27088765788066,3.6497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491953754172454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380987365753014,0,0,0,0.102827492703324,0.901029173531752,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0.496215615637554,0.153461973288062,0.280660094433074,0.768834895534206,0,0.160853921143607,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0.270946437543853,1.00337954770971,0,0.831076008928724,0.223874754722178,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0.214840489736547,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0.719489830333259,0.274537029736055,0.235624804691373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379473173765715,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,11.964295966277,1.92495971052672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.51945513073589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,1.1528195219403,3.05175990993225,1.62971057883012,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0,0,0,0,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04471047896483,0,0,0,0,0,0,0,0,0,0,0,1.95551382734803,0,0,0.599428828746391,0.72045208577053,7.78848853928227,2.05913997434357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.32991899054908,0,0,0.0674035438541849,0.0984274815147488,0,0,0,4.01882871162548,4.26372253451425,4.15440338029185,0,0,0,0,0,0.314727528809989,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0.761610424337591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491545817507439,0,0,0,0,0,0,0,0,0.127894371303652,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0.261906694481422,0,0.147856086217045,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68163297988273,0,0,0,0,0,3.02227705957126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0,6.54060499276627,0,0.109940516745429,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458729283404541,0,1.57771562193185,0,0,0,0,0,0,0.756998549010474,1.63898357945543,0.760191006068622,1.52983244612973,2.40495664739004,1.19463369395298,0.250707539292375,0.151557396436479,0.535928260312357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54666210360852,0.106727345877715,0,0,0,0,0,0,0,0 | |||
|short_description=p4@SALL4 | |||
}} |
Revision as of 12:13, 21 January 2014
Short description: | p4@SALL4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SALL4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000371539_5end |
EntrezGene: | SALL4 |
HGNC: | 15924 |
UniProt: | Q6Y8G5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 7.79e-34 | 5 |
germ line cell | 3.88e-33 | 7 |
germ cell | 3.88e-33 | 7 |
neuron | 4.46e-11 | 6 |
neuroblast | 4.46e-11 | 6 |
electrically signaling cell | 4.46e-11 | 6 |
neuronal stem cell | 2.02e-08 | 8 |
bladder cell | 8.69e-08 | 1 |
lower urinary tract cell | 8.69e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
testis | 6.73e-08 | 8 |
urinary bladder urothelium | 8.69e-08 | 1 |
wall of urinary bladder | 8.69e-08 | 1 |
mucosa of urinary bladder | 8.69e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 9.00e-14 | 22 |
germ cell cancer | 9.00e-14 | 22 |
cell type cancer | 1.18e-08 | 143 |