FFCP PHASE1:Hg19::chr22:30162924..30163005,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55954 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28046 | |||
|TSSclassifier=strong | |||
|UniProt=Q9UDW3 | |||
|association_with_transcript=0bp_to_ENST00000344318,ENST00000397781,ENST00000489010,NM_001003692,NM_019103,uc003agm.2,uc003agn.2,uc003ago.1_5end | |||
|description=CAGE_peak_1_at_ZMAT5_5end | |||
|id=chr22:30162924..30163005,- | |||
|ontology_enrichment_celltype=CL:0000183!3.63e-13!59;CL:0000055!1.45e-12!180;CL:0000680!8.31e-11!57;CL:0000056!8.31e-11!57;CL:0000355!8.31e-11!57;CL:0000187!1.15e-10!54;CL:0000393!1.18e-10!60;CL:0000211!1.18e-10!60;CL:0000222!2.22e-10!119;CL:0000192!1.30e-09!42;CL:0000514!1.30e-09!42;CL:0000220!3.14e-08!246;CL:0002321!4.65e-08!248;CL:0000359!2.11e-07!32;CL:0002371!6.67e-07!591 | |||
|ontology_enrichment_celltype_v019=CL:0000192;1.12e-07;43!CL:0000359;2.69e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,4.13e-11,58;CL:0000056,4.13e-11,58;CL:0000355,4.13e-11,58;CL:0000222,5.35e-11,121;CL:0000187,5.70e-11,55;CL:0000393,5.91e-11,61;CL:0000211,5.91e-11,61;CL:0000192,6.39e-10,43;CL:0000514,6.39e-10,43;CL:0002321,1.63e-08,250;CL:0000359,2.11e-07,32 | |||
|ontology_enrichment_development_v019=CL:0000514;1.12e-07;43!CL:0000355;8.48e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!2.30e-17!143;UBERON:0000475!2.69e-15!365;UBERON:0000914!4.63e-15!83;UBERON:0002329!4.63e-15!83;UBERON:0003077!4.63e-15!83;UBERON:0003059!4.63e-15!83;UBERON:0007282!4.63e-15!83;UBERON:0009618!4.63e-15!83;UBERON:0007285!4.63e-15!83;UBERON:0000483!1.06e-14!309;UBERON:0000119!2.58e-14!312;UBERON:0000481!3.21e-14!347;UBERON:0004290!2.37e-13!70;UBERON:0003914!3.44e-12!118;UBERON:0000490!4.24e-12!138;UBERON:0002100!7.93e-12!216;UBERON:0000025!2.12e-11!194;UBERON:0001134!3.57e-11!61;UBERON:0002036!3.57e-11!61;UBERON:0003082!3.57e-11!61;UBERON:0000477!6.59e-11!286;UBERON:0002385!2.30e-10!63;UBERON:0001015!2.30e-10!63;UBERON:0000383!2.30e-10!63;UBERON:0004111!6.61e-10!241;UBERON:0000486!7.38e-10!82;UBERON:0003104!1.26e-08!238;UBERON:0009142!1.26e-08!238;UBERON:0004872!2.05e-08!84;UBERON:0002049!8.69e-08!79;UBERON:0007798!8.69e-08!79;UBERON:0001981!4.14e-07!60;UBERON:0007500!4.14e-07!60;UBERON:0004537!4.14e-07!60;UBERON:0006965!4.14e-07!60;UBERON:0001637!6.36e-07!42;UBERON:0003509!6.36e-07!42;UBERON:0004572!6.36e-07!42 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,7.39e-17,78;UBERON:0000483,2.30e-16,306;UBERON:0000119,5.98e-16,309;UBERON:0003104,3.00e-15,160;UBERON:0009142,3.00e-15,160;UBERON:0000490,2.17e-14,148;UBERON:0007524,6.08e-14,73;UBERON:0005256,6.43e-14,122;UBERON:0003077,1.00e-13,72;UBERON:0007285,1.00e-13,72;UBERON:0002329,1.16e-13,71;UBERON:0003059,1.16e-13,71;UBERON:0007282,1.16e-13,71;UBERON:0004290,1.16e-13,71;UBERON:0009618,1.16e-13,71;UBERON:0003914,6.46e-12,117;UBERON:0001134,1.78e-11,62;UBERON:0002036,1.78e-11,62;UBERON:0003082,1.78e-11,62;UBERON:0000025,1.78e-11,192;UBERON:0002385,1.17e-10,64;UBERON:0001015,1.17e-10,64;UBERON:0000383,1.17e-10,64;UBERON:0000486,3.92e-10,83;UBERON:0004111,4.04e-10,240;UBERON:0002100,6.86e-10,199;UBERON:0004872,1.98e-08,83;UBERON:0002049,8.41e-08,78;UBERON:0007798,8.41e-08,78;UBERON:0010314,1.59e-07,132;UBERON:0000479,1.93e-07,773;UBERON:0005423,3.14e-07,581;UBERON:0000922,3.57e-07,592;UBERON:0007500,3.91e-07,59;UBERON:0001981,3.91e-07,59;UBERON:0004537,3.91e-07,59;UBERON:0006965,3.91e-07,59;UBERON:0001637,6.36e-07,42;UBERON:0003509,6.36e-07,42;UBERON:0004572,6.36e-07,42 | |||
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| |||
|short_description=p1@ZMAT5 | |||
}} |
Revision as of 15:12, 21 January 2014
Short description: | p1@ZMAT5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ZMAT5_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000344318, ENST00000397781, ENST00000489010, NM_001003692, NM_019103, uc003agm.2, uc003agn.2, uc003ago.1_5end |
EntrezGene: | ZMAT5 |
HGNC: | 28046 |
UniProt: | Q9UDW3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 4.13e-11 | 58 |
myoblast | 4.13e-11 | 58 |
multi-potent skeletal muscle stem cell | 4.13e-11 | 58 |
mesodermal cell | 5.35e-11 | 121 |
muscle cell | 5.70e-11 | 55 |
electrically responsive cell | 5.91e-11 | 61 |
electrically active cell | 5.91e-11 | 61 |
smooth muscle cell | 6.39e-10 | 43 |
smooth muscle myoblast | 6.39e-10 | 43 |
embryonic cell | 1.63e-08 | 250 |
vascular associated smooth muscle cell | 2.11e-07 | 32 |