FFCP PHASE1:Hg19::chr3:12704990..12705013,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr3:12704990..12705013,- | |||
|id=chr3:12704990..12705013,- | |||
|ontology_enrichment_celltype=CL:0000055!1.57e-16!180;CL:0000057!2.03e-16!75;CL:0002620!7.87e-11!23 | |||
|ontology_enrichment_celltype_v019=CL:0002620;2.35e-18;23!CL:0000057;1.31e-13;73!CL:0002556;2.24e-12;6!CL:0002552;7.70e-10;5!CL:0002580;5.90e-07;3!CL:0002559;8.10e-07;5!CL:0000515;9.22e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,8.44e-29,76;CL:0002620,5.46e-19,23;CL:0002556,1.74e-12,6;CL:0002552,1.14e-09,5;CL:0000048,1.38e-08,427;CL:0000723,3.26e-08,433;CL:0000034,9.84e-08,441;CL:0000134,4.00e-07,354;CL:0002559,6.18e-07,5;CL:0002580,6.34e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;3.03e-10;5!DOID:450;3.03e-10;5!DOID:66;3.03e-10;5!DOID:423;3.03e-10;5!DOID:0080000;3.03e-10;5!DOID:11722;3.03e-10;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,2.46e-10,5;DOID:450,2.46e-10,5;DOID:66,2.46e-10,5;DOID:423,2.46e-10,5;DOID:0080000,2.46e-10,5;DOID:11722,2.46e-10,5 | |||
|ontology_enrichment_uberon=UBERON:0003102!4.47e-14!95;UBERON:0002097!1.30e-10!40;UBERON:0000468!1.93e-10!659;UBERON:0002199!2.84e-10!45;UBERON:0002416!2.84e-10!45;UBERON:0000467!4.71e-09!625;UBERON:0000480!6.68e-09!626;UBERON:0000475!6.96e-09!365;UBERON:0000914!6.19e-08!83;UBERON:0002329!6.19e-08!83;UBERON:0003077!6.19e-08!83;UBERON:0003059!6.19e-08!83;UBERON:0007282!6.19e-08!83;UBERON:0009618!6.19e-08!83;UBERON:0007285!6.19e-08!83 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;4.39e-13;41!UBERON:0001758;2.24e-12;6!UBERON:0003672;2.24e-12;6!UBERON:0003129;1.81e-10;7!UBERON:0002199;1.96e-09;46!UBERON:0002416;1.96e-09;46!UBERON:0011137;2.58e-08;11!UBERON:0010323;2.58e-08;11!UBERON:0003102;4.08e-08;50!UBERON:0000165;1.14e-07;28!UBERON:0001434;7.31e-07;36!UBERON:0002073;8.10e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,3.34e-18,99;UBERON:0002097,1.44e-16,41;UBERON:0002199,4.28e-14,46;UBERON:0002416,4.28e-14,46;UBERON:0001758,1.74e-12,6;UBERON:0003672,1.74e-12,6;UBERON:0003129,1.46e-10,7;UBERON:0000165,1.63e-08,29;UBERON:0000930,1.63e-08,29;UBERON:0010323,3.08e-08,11;UBERON:0002384,4.53e-07,371;UBERON:0002073,6.18e-07,5;UBERON:0005086,6.18e-07,5 | |||
|phase1_expression=1.81678379270557,3.21150785836475,0.563817616383885,2.00146596706261,0.446961094427288,0,0,0.631719873426831,0,0.737201809504527,0,0.218441372130172,0,0.74259811776028,0.331397375727916,0.672325146451775,0,0,0.975865597581014,0.61560529038394,0.408001382488506,0.313454721478088,0.85870796139317,0,0.251085279189606,0,0,0,0,0,0,0.919421224478927,0.30120591877825,0,0,0,0,0,0.200544447470142,0,0.223915474239924,0.971680998056939,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0.605399502633369,0,0,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2786256184353,1.80719576192283,1.00267582127178,1.15877215168659,1.5905718941022,0.486634870302636,0.567208902984407,0.665188192387692,0.527008714158756,0.589405839739707,0.364295288292542,0,0.324547393654683,1.74129737299267,0.398873881556595,0,0,0,0.198762407366705,1.72046919021225,0.347140501607594,0,0.838998872419812,0.550236083880135,0.417989933073621,1.55050055501597,0.71153252537342,0,0.805658634218294,0,0.24406205754817,0,0.81014194788176,0.17859945656816,0,0.225222960966644,1.53316637465883,0,0.366403487860815,0,0,0,1.98788780678127,0.633152558322899,1.32409180813219,1.14734648299525,0.354668382198357,2.24271040056923,0,1.2333377420858,0.311211035399766,0.808264032418128,0.326923806226917,1.21085942115945,0.576175924479999,0,1.87296046098192,1.71141546463335,1.79338416662161,0.117434498643765,0,0.561803226808994,1.22492502752936,1.59684612505298,1.03325781175765,2.37600571456411,4.45080472701402,1.82032272387605,0,1.5150250255866,1.37630371859161,2.77064115484183,3.07284334616587,5.82326812018137,5.70904623845068,1.02088964844019,5.202299434977,2.56268866582281,2.11931901159562,1.20036438433761,1.75189299705346,1.54584324027377,1.8611685633159,0.506328996723799,1.26668106709558,3.78650661366172,3.22174645248048,0.969876340912871,3.19508633264953,2.01504196455281,2.03472710772585,0.386521706326594,0.272746120590835,0.286804595389004,0,0,0,0,0,0,1.56449532329816,0.643240938192885,1.38134921352481,3.71494342425583,10.1063127433742,0.236613600079688,0.337169380156203,0.482022059766964,0.55146986366197,0.435758888184812,0.237270619111097,0.404493924480493,0.98110732562673,0,0.738155454624648,0,0.8231480226628,0,1.26755034821831,0.982827216677626,0,0,0.122988438543114,0.171567810298526,0.768251997860379,0,0,0,0,0,0,0.463721619900307,0.587043471179108,0.288732895522148,0,0.380508304469197,0,0.858486162094873,0.492434012174795,3.27605971194933,0.743155811443641,0,0,0.567100388969546,0.179117045405697,0.581267877027924,0,0.492663237895943,0,0,0,0.12624243342638,0.698476837213859,0,0,0,0.514137463516618,0,0.571652865261156,0.336393253036082,0,0.36669142910475,0.517086863031111,0,0,0.26593811658487,0,0.257207374262142,1.41849132023278,0.266422179016099,0,0,0,0,0,0,0.602878754119172,0.871533458600294,0.499864955910285,0,0.502257091432126,2.10833939483032,2.15662369942424,1.14861935834114,0,2.89562613335158,1.02738161275192,2.14873155887875,0,0,0,0,1.77866236955724,0,1.54657762555539,0.502548796003046,0,0,0,0,0.12269149171914,0.500170521059677,0,3.74347550755453,3.92543775353756,7.254311091561,1.99140405487612,2.70851489754947,0,0,0.664225598535437,0.368738337083406,1.12948698808508,0.195801157462741,0,0,0,0.106727557803444,0.606255142892519,0,0,1.24053903909388,5.06424511850606,2.80660094433074,0.768834895534206,2.04682899626681,1.12597744800525,0,0.308419387605311,0.887808626565635,0.0821271560138091,0,0.116210378459959,0,0.601519410909855,0,0.918515585316854,0.182091168006717,1.18011973463482,0,0.231046011313244,0,1.46139224653261,0.211103257785751,0,0.170093705276516,0,0,0,0.501689773854853,0.254876273045038,0,0.671624264166535,0,0,1.02580050046556,1.64007322849853,0,0,1.00726411300178,0.82509499920588,0.574265537996172,0,0,0.193341436584244,0.154048617114644,0.15350367472613,0.137836572484531,0,0.435050081742686,0.255679882248303,1.24644849905432,0.330569830721956,0,0.893288987462089,0,0,0.62962469366128,0,0.308033580176089,0.532306030317022,0,0,0.143124886741991,1.116475108079,0,0.953150969619124,0.767693373934002,0,0,0,0.719489830333259,0,0.353437207037059,1.01091240786658,0,1.26377536871694,0.48763373908959,0.243713489631284,0,0.272999822815972,0.989838023675989,1.13008116620243,1.10273068709225,0.66343897524122,0,0.578775534266688,0,0.811641507850816,0.30982349809975,0.281695602532241,0.286822704408103,0.687743287091848,0,0,1.68886108238131,0,0.379473173765715,0,0.384888450902048,0.670302275535787,0,0.470719003883896,1.29151611801369,0,0,0,0.507447609232169,0,0.569647187174163,0,0,0,0.540031437238115,0.79312517629427,0.320472213382419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0.146508179271894,0.121360521749513,0,0,0,0,0,0,0.422008249231538,0,0,0.211125408127993,0.597743964753209,0,0,0,0,6.22079175323615,0.0898683511473268,0,0,0.0986434056369336,0,4.44547960578548,0,0.0927680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| |||
|short_description=p@chr3:12704990..12705013,- | |||
}} |
Revision as of 17:27, 21 January 2014
Short description: | p@chr3:12704990..12705013, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:12704990..12705013, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 8.44e-29 | 76 |
skin fibroblast | 5.46e-19 | 23 |
fibroblast of periodontium | 1.74e-12 | 6 |
fibroblast of gingiva | 1.14e-09 | 5 |
multi fate stem cell | 1.38e-08 | 427 |
somatic stem cell | 3.26e-08 | 433 |
stem cell | 9.84e-08 | 441 |
mesenchymal cell | 4.00e-07 | 354 |
hair follicle cell | 6.18e-07 | 5 |
preadipocyte of the breast | 6.34e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
surface structure | 3.34e-18 | 99 |
skin of body | 1.44e-16 | 41 |
integument | 4.28e-14 | 46 |
integumental system | 4.28e-14 | 46 |
periodontium | 1.74e-12 | 6 |
dentition | 1.74e-12 | 6 |
skull | 1.46e-10 | 7 |
mouth | 1.63e-08 | 29 |
stomodeum | 1.63e-08 | 29 |
cranial skeletal system | 3.08e-08 | 11 |
connective tissue | 4.53e-07 | 371 |
hair follicle | 6.18e-07 | 5 |
hair follicle placode | 6.18e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 2.46e-10 | 5 |
myotonic disease | 2.46e-10 | 5 |
muscle tissue disease | 2.46e-10 | 5 |
myopathy | 2.46e-10 | 5 |
muscular disease | 2.46e-10 | 5 |
myotonic dystrophy | 2.46e-10 | 5 |