FFCP PHASE1:Hg19::chr3:112359324..112359338,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C91 | |||
|description=CAGE_peak_at_chr3:112359324..112359338,+ | |||
|id=chr3:112359324..112359338,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.22e-32!180;CL:0000057!3.53e-19!75;CL:0000680!1.10e-18!57;CL:0000056!1.10e-18!57;CL:0000355!1.10e-18!57;CL:0000187!4.03e-17!54;CL:0000192!1.23e-16!42;CL:0000514!1.23e-16!42;CL:0000144!1.71e-15!625;CL:0000393!1.85e-15!60;CL:0000211!1.85e-15!60;CL:0000183!6.48e-15!59;CL:0000048!7.43e-14!430;CL:0000548!1.48e-13!679;CL:0000004!1.48e-13!679;CL:0000255!1.48e-13!679;CL:0002371!1.96e-13!591;CL:0000723!3.32e-13!436;CL:0000012!4.02e-13!682;CL:0000034!2.79e-12!444;CL:0000359!3.96e-12!32;CL:0002620!2.68e-10!23;CL:0000222!1.36e-09!119;CL:0000136!1.12e-08!15;CL:0000003!1.91e-08!722;CL:0000220!8.58e-07!246 | |||
|ontology_enrichment_celltype_v019=CL:0000192;4.64e-15;43!CL:0000359;1.04e-13;32!CL:0000134;4.99e-13;55!CL:0000723;3.32e-12;61!CL:0000048;5.19e-12;58!CL:0002620;6.60e-12;23!CL:0000187;9.35e-09;55!CL:0002570;1.20e-08;8!CL:0000136;3.95e-08;13!CL:0000034;6.87e-08;69!CL:0002540;6.06e-07;6!CL:0000393;6.27e-07;61!CL:0000211;6.27e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,5.60e-20,43;CL:0000514,5.60e-20,43;CL:0000048,4.61e-19,427;CL:0000723,2.26e-18,433;CL:0000034,1.76e-17,441;CL:0000680,3.58e-16,58;CL:0000056,3.58e-16,58;CL:0000355,3.58e-16,58;CL:0000187,8.56e-15,55;CL:0000359,3.40e-14,32;CL:0000057,3.94e-13,76;CL:0000393,1.68e-12,61;CL:0000211,1.68e-12,61;CL:0002620,5.52e-12,23;CL:0000136,1.05e-09,15;CL:0002320,5.00e-09,361;CL:0002570,1.88e-08,8;CL:0000134,3.26e-08,354;CL:0000219,3.43e-07,386;CL:0002540,4.66e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000514;4.64e-15;43!CL:0000355;9.43e-10;58 | |||
|ontology_enrichment_disease=DOID:2394!3.79e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;7.76e-12;14!DOID:17;2.52e-08;5!DOID:450;2.52e-08;5!DOID:66;2.52e-08;5!DOID:423;2.52e-08;5!DOID:0080000;2.52e-08;5!DOID:11722;2.52e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,4.73e-12,14;DOID:17,1.94e-08,5;DOID:450,1.94e-08,5;DOID:66,1.94e-08,5;DOID:423,1.94e-08,5;DOID:0080000,1.94e-08,5;DOID:11722,1.94e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0000914!2.06e-19!83;UBERON:0002329!2.06e-19!83;UBERON:0003077!2.06e-19!83;UBERON:0003059!2.06e-19!83;UBERON:0007282!2.06e-19!83;UBERON:0009618!2.06e-19!83;UBERON:0007285!2.06e-19!83;UBERON:0004290!1.18e-18!70;UBERON:0000486!8.48e-18!82;UBERON:0001134!2.97e-16!61;UBERON:0002036!2.97e-16!61;UBERON:0003082!2.97e-16!61;UBERON:0002385!3.58e-15!63;UBERON:0001015!3.58e-15!63;UBERON:0000383!3.58e-15!63;UBERON:0005256!2.32e-14!143;UBERON:0002199!1.83e-09!45;UBERON:0002416!1.83e-09!45;UBERON:0002100!3.77e-09!216;UBERON:0004872!4.13e-09!84;UBERON:0003102!6.20e-09!95;UBERON:0002097!8.75e-09!40;UBERON:0001637!8.78e-09!42;UBERON:0003509!8.78e-09!42;UBERON:0004572!8.78e-09!42;UBERON:0004573!1.12e-08!33;UBERON:0004571!1.12e-08!33;UBERON:0000490!1.13e-08!138;UBERON:0000475!1.30e-07!365;UBERON:0001013!3.95e-07!14;UBERON:0001981!9.14e-07!60;UBERON:0007500!9.14e-07!60;UBERON:0004537!9.14e-07!60;UBERON:0006965!9.14e-07!60 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;3.88e-10;33!UBERON:0004571;3.88e-10;33!UBERON:0002097;3.88e-09;41!UBERON:0001637;1.27e-08;42!UBERON:0003509;1.27e-08;42!UBERON:0004572;1.27e-08;42!UBERON:0002199;1.40e-07;46!UBERON:0002416;1.40e-07;46!UBERON:0002119;4.66e-07;4!UBERON:0001013;6.03e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.58e-14,62;UBERON:0002036,1.58e-14,62;UBERON:0003082,1.58e-14,62;UBERON:0007524,2.75e-14,73;UBERON:0002329,7.30e-14,71;UBERON:0003059,7.30e-14,71;UBERON:0007282,7.30e-14,71;UBERON:0004290,7.30e-14,71;UBERON:0009618,7.30e-14,71;UBERON:0002385,8.68e-14,64;UBERON:0001015,8.68e-14,64;UBERON:0000383,8.68e-14,64;UBERON:0003077,1.55e-13,72;UBERON:0007285,1.55e-13,72;UBERON:0001637,3.05e-12,42;UBERON:0003509,3.05e-12,42;UBERON:0004572,3.05e-12,42;UBERON:0007503,9.15e-12,78;UBERON:0004573,1.06e-11,33;UBERON:0004571,1.06e-11,33;UBERON:0002097,1.46e-11,41;UBERON:0002199,1.35e-10,46;UBERON:0002416,1.35e-10,46;UBERON:0000486,1.67e-10,83;UBERON:0004872,9.35e-10,83;UBERON:0002384,1.10e-08,371;UBERON:0005256,3.89e-08,122;UBERON:0007500,1.12e-07,59;UBERON:0001981,1.12e-07,59;UBERON:0004537,1.12e-07,59;UBERON:0006965,1.12e-07,59;UBERON:0003104,2.87e-07,160;UBERON:0009142,2.87e-07,160;UBERON:0000926,4.53e-07,315;UBERON:0004120,4.53e-07,315;UBERON:0006603,4.53e-07,315;UBERON:0002119,4.72e-07,4;UBERON:0001013,9.83e-07,14 | |||
|phase1_expression=1.2717486548939,0.856402095563933,2.25527046553554,1.0007329835313,2.23480547213644,0.872338524100369,0,0.631719873426831,1.04474251279935,0.982935746006035,0.697801167972428,1.52908960491121,0.527533956456907,2.72285976512103,2.65117900582333,2.01697543935533,0,3.65155045193687,0.975865597581014,1.23121058076788,1.02000345622126,0.626909442956176,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.645484683583826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,1.44575660953827,10.0267582127178,1.59331170856906,1.5905718941022,0.973269740605272,0,0.665188192387692,0.263504357079378,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0.760272105718513,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,1.51956613997496,123.40535651792,6.3104056564739,1.41867352879343,2.24271040056923,2.1349799145941,0.49333509683432,1.55605517699883,0.269421344139376,0.326923806226917,0.908144565869588,0.576175924479999,0,0.312160076830321,0.570471821544449,0,0.352303495931295,0.323745888736263,0.421352420106746,0.204154171254893,0,0.206651562351531,0,0.741800787835671,1.82032272387605,0.718618141816238,0,0,0.277064115484183,1.75591048352335,1.22595118319608,0.45071417671979,0.567160915800105,4.84352016359927,2.56268866582281,3.17897851739343,4.20127534518163,2.88547081867629,8.24449728146013,1.30281799432113,6.41350062516812,1.36411807225678,4.29137416214995,2.30124746605748,1.77810662500693,10.2952781829818,1.20902517873168,4.57813599238317,0.773043412653187,0.272746120590835,0.286804595389004,0,0,0.116193942869518,0,0,0,9.38697193978896,0.643240938192885,4.14404764057442,15.7885095530873,12.9938306700525,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0.686271241194102,0.109750285408626,0,0,0,0.325808305310325,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.1396703616701,0,0.80672114403045,0.387815147273333,17.8828222925941,3.381211010224,0.26593811658487,0,1.54324424557285,2.83698264046557,0.532844358032199,1.00084595560703,0,4.11620168390384,1.30294473717494,1.77695974371273,0,0.602878754119172,1.74306691720059,0.99972991182057,0,0,0,1.91699884393266,1.14861935834114,0,3.61953266668948,0.410952645100767,2.14873155887875,0,0,0,0,0,0,0.773288812777695,0,0.637938751653163,0,0,0,0.981531933753119,1.50051156317903,0.271265023699736,1.45579603071565,1.42743191037729,1.10391690523754,0.819989904948992,0.601892199455438,0,0,0,0.737476674166813,0.60818530127658,0.195801157462741,0,0,0,0,1.5156378572313,1.66435439510497,0.604780586659361,1.73675465473144,6.29194090481056,0.561320188866147,4.35673107469383,1.53512174720011,0.965123526861645,1.48418066444991,0.154209693802656,0.710246901252508,0.9033987161519,0,0.464841513839837,0,0.200506470303285,0.184161977871793,2.52591785962135,0.728364672026868,1.83574180943194,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0.256450125116389,0,0,0,0.183138929636687,0.082509499920588,1.14853107599234,0.650060246036521,1.6068392984416,0.386682873168488,0.154048617114644,0.460511024178389,0.964856007391714,0.966782203814463,1.0151168573996,0.340906509664404,0.534192213880424,0.330569830721956,0,2.4246415373971,0.10115778085555,0,18.5739284630078,2.7881490806424,1.84820148105653,1.06461206063404,1.73986598415015,1.66791797193528,4.00749682877575,0,0.632758849437452,1.5250415513906,2.04718233049067,0.42793898803392,5.72765846266686,4.70969184119538,1.07923474549989,1.64722217841633,0.942499218765491,2.83055474202642,4.75530963519025,0.421258456238981,9.26504104270222,0.243713489631284,1.05650146756755,2.18399858252777,1.1312434556297,1.13008116620243,1.10273068709225,0,0.876901770507525,2.89387767133344,0,1.62328301570163,0,1.40847801266121,1.14729081763241,0.88424136911809,1.07001315444375,2.12856638442359,0.211107635297664,0.987884678879706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0.284136146806413,0.47748896947538,0.593929361665277,0.921482106297696,0,0,1.00177834520615,0,0,0,0,0,0,0,2.17727711363265,0.179736702294654,0,0,0.0986434056369336,0,2.22273980289274,0.969332746095218,0,1.99613798001194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278847488557207,0.230850775511391,0.113942055847001,0.23056390438806,0,0,0.638002319463839,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,3.91756793696625,0,0,0,0,0,0,0,0,0,0.0979923974143777,0.69647365264322,0,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0.213452994739353,0,0,0,0,0,0,0.235694034616795,0.135904206073614,0,1.01998217636322,0,0,0,0,0,0,0,0.229160424011684,0.717873024576814,0,0,0,0,1.08089965062721,0,0,0,0,0.196854963029498,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0.191915197319445,0,0,0,2.17199840701485,0.864221491201268,0.979762080328227,0,0,0.3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| |||
|short_description=p@chr3:112359324..112359338,+ | |||
}} |
Revision as of 20:33, 21 January 2014
Short description: | p@chr3:112359324..112359338, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:112359324..112359338, + |
Coexpression cluster: | C91_Fibroblast_Smooth_mesenchymal_Mesothelial_Small_Preadipocyte_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 5.60e-20 | 43 |
smooth muscle myoblast | 5.60e-20 | 43 |
multi fate stem cell | 4.61e-19 | 427 |
somatic stem cell | 2.26e-18 | 433 |
stem cell | 1.76e-17 | 441 |
muscle precursor cell | 3.58e-16 | 58 |
myoblast | 3.58e-16 | 58 |
multi-potent skeletal muscle stem cell | 3.58e-16 | 58 |
muscle cell | 8.56e-15 | 55 |
vascular associated smooth muscle cell | 3.40e-14 | 32 |
fibroblast | 3.94e-13 | 76 |
electrically responsive cell | 1.68e-12 | 61 |
electrically active cell | 1.68e-12 | 61 |
skin fibroblast | 5.52e-12 | 23 |
fat cell | 1.05e-09 | 15 |
connective tissue cell | 5.00e-09 | 361 |
mesenchymal stem cell of adipose | 1.88e-08 | 8 |
mesenchymal cell | 3.26e-08 | 354 |
motile cell | 3.43e-07 | 386 |
mesenchymal stem cell of the bone marrow | 4.66e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 4.73e-12 | 14 |
musculoskeletal system disease | 1.94e-08 | 5 |
myotonic disease | 1.94e-08 | 5 |
muscle tissue disease | 1.94e-08 | 5 |
myopathy | 1.94e-08 | 5 |
muscular disease | 1.94e-08 | 5 |
myotonic dystrophy | 1.94e-08 | 5 |