FFCP PHASE1:Hg19::chr3:124829277..124829294,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=84561 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15595 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=267bp_to_ENST00000479231_5end | |||
|coexpression_cluster_id=C4277 | |||
|description=CAGE_peak_10_at_SLC12A8_5end | |||
|id=chr3:124829277..124829294,- | |||
|ontology_enrichment_celltype=CL:0000077!1.17e-10!19;CL:0000055!2.15e-10!180;CL:0000144!1.68e-09!625;CL:0000183!5.88e-09!59;CL:0000220!4.42e-08!246;CL:0000548!6.32e-08!679;CL:0000004!6.32e-08!679;CL:0000255!6.32e-08!679;CL:0002321!6.60e-08!248;CL:0000012!9.19e-08!682;CL:0000187!1.91e-07!54;CL:0000222!2.79e-07!119;CL:0000680!8.50e-07!57;CL:0000056!8.50e-07!57;CL:0000355!8.50e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0002588;9.32e-15;2!CL:0002569;3.08e-11;6!CL:0000197;1.13e-10;6!CL:0000098;1.13e-10;6!CL:0002167;1.13e-10;6!CL:0002568;1.36e-08;1!CL:0000511;4.56e-08;1!CL:0002625;4.56e-08;1!CL:0000216;4.56e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002588,6.82e-15,2;CL:0002569,2.83e-11,6;CL:0000197,1.61e-10,6;CL:0000098,1.61e-10,6;CL:0002167,1.61e-10,6;CL:0002568,1.13e-08,1;CL:0000511,3.57e-08,1;CL:0002625,3.57e-08,1;CL:0000216,3.57e-08,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!2.94e-11!14 | |||
|ontology_enrichment_disease_v019=DOID:3369;1.05e-08;1!DOID:2394;4.18e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3369,1.05e-08,1;DOID:2394,3.70e-08,14 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0003422;3.08e-11;6!UBERON:0003104;1.06e-09;7!UBERON:0009142;1.06e-09;7!UBERON:0001282;2.17e-08;1!UBERON:0009842;2.17e-08;1!UBERON:0003704;2.17e-08;1!UBERON:0001171;2.17e-08;1!UBERON:0001172;2.17e-08;1!UBERON:0001136;4.56e-08;1!UBERON:0001343;4.56e-08;1!UBERON:0004910;4.56e-08;1!UBERON:0004813;4.56e-08;1!UBERON:0002331;6.37e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003422,2.83e-11,6;UBERON:0001282,1.88e-08,1;UBERON:0009842,1.88e-08,1;UBERON:0003704,1.88e-08,1;UBERON:0001171,1.88e-08,1;UBERON:0001172,1.88e-08,1;UBERON:0001136,3.57e-08,1;UBERON:0001343,3.57e-08,1;UBERON:0004910,3.57e-08,1;UBERON:0005154,3.57e-08,1;UBERON:0005295,3.57e-08,1;UBERON:0004813,3.57e-08,1;UBERON:0005297,3.57e-08,1;UBERON:0005294,3.57e-08,1;UBERON:0010141,3.57e-08,1;UBERON:0005891,3.57e-08,1;UBERON:0002331,6.06e-07,10;UBERON:0000358,6.06e-07,10;UBERON:0000307,6.06e-07,10;UBERON:0000091,6.06e-07,10;UBERON:0000087,6.06e-07,10;UBERON:0007010,6.06e-07,10;UBERON:0007806,6.06e-07,10;UBERON:0008780,6.06e-07,10;UBERON:0005728,6.06e-07,10 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0.994192127183747,0,0,0,0,0.738726348460727,0.204000691244253,0.940364164434263,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426224750532694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.255725123687061,0.361439152384566,0,0,0,0,0.0945348171640679,0,0.351339142772504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.47274756525787,0.25326102332916,0.794455084879313,0.573673241497627,0,0.560677600142307,0,0.49333509683432,0,0,0,0,0,0.468642863667593,0,0,0,0,0,0,0,0.122834317311768,0,0,0.247266929278557,0,1.43723628363248,0,0,0.277064115484183,0,0,0,0,0,0,0,0.300091096084402,0,0,0,0,0,0,0.0920498986422993,1.2931684545505,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0.464367928031979,0,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0.4115740113314,0,0,0,0,0,0,0.514703430895577,0,0,0,0,0.325808305310325,0,0,0.463721619900307,3.52226082707465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.61960804121778,0,0,0,0,0.257207374262142,0,0,0.285955987316295,0,2.46972101034231,0,0.355391948742546,2.37585561880029,0.602878754119172,1.74306691720059,0.299918973546171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,1.03985430765404,1.07057393278297,0.788512075169673,1.40569697991256,0,0,0,0,0.368738337083406,0,0.195801157462741,0,0,0,0,0,0,0,0.744323423456331,0.153461973288062,0,0.640695746278505,0,0.64341568457443,0,0,0,0,0,0,0,0.200506470303285,0,3.4444334449382,0,0.524497659837696,0,0,0,0,0,0,0,0,0,0.270946437543853,0.501689773854853,0,0,0,0,0,0,0,0.650756789328606,0,0,0,0,0,1.6068392984416,0.193341436584244,0,0,0,0,0,0,0.356128142586949,0,0,0,0,0,1.25924938732256,0,0,0,0,0,0,0.372158369359667,0.316379424718726,5.52827562379092,0.511795582622668,0,0,0,0.359744915166629,1.09814811894422,0.589062011728432,0,0,0.421258456238981,0.48763373908959,0.243713489631284,0,0.136499911407986,3.53513579884282,0,0,0,0,0,0,0.202910376962704,0,0,1.72093622644862,2.45622602532803,0,0,0,0.329294892959902,0,0.699869440489966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.445234820091624,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.62066728448103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569219092059585,0,0,0,0,0,0,0,0.0730893170861856,0,0,0,0,0,0,0,0,0.320635281006135,0,0.999048047910651,0,0,0,0,0.124252535565433,0,0,0,0.509991088181609,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0.233713309847224,0,0,0,0,1.14420034198462,0.453692771289717,0.466311601748341,0,0,0,0.621051827505038,0.414706207840855,2.65841714557995,0.521745061811734,1.95334891696384,3.42724690951916,1.22061219961398,0.181848659202559,0.966695013382396,0,0.398095888698616,0,0,0,0,0,0,0,2.26705925512272,0.463044948647668,0,0.358177682162975,0.926404341482917,3.0699766941019,0.176689145945881,0.192914038270915,0,0,0,0.303859956177382,0,0,0,0,0,0,0,0,0,0,1.13503190713367,0,0,0,0,0,0,0,0,0,0,0,0.636008701306837,0,0,0,2.1437183414724,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462175628631418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448527450322454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p10@SLC12A8 | |||
}} |
Revision as of 21:04, 21 January 2014
Short description: | p10@SLC12A8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_SLC12A8_5end |
Coexpression cluster: | C4277_mesothelioma_Smooth_normal_Prostate_Ewing_thyroid_glioblastoma |
Association with transcript: | 267bp_to_ENST00000479231_5end |
EntrezGene: | SLC12A8 |
HGNC: | 15595 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the umbilical vein | 6.82e-15 | 2 |
mesenchymal stem cell of umbilical cord | 2.83e-11 | 6 |
receptor cell | 1.61e-10 | 6 |
sensory epithelial cell | 1.61e-10 | 6 |
olfactory epithelial cell | 1.61e-10 | 6 |
mesenchymal stem cell of Wharton's jelly | 1.13e-08 | 1 |
androgen binding protein secreting cell | 3.57e-08 | 1 |
seminiferous tubule epithelial cell | 3.57e-08 | 1 |
Sertoli cell | 3.57e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
mesenchyme of umbilical cord | 2.83e-11 | 6 |
intralobular bile duct | 1.88e-08 | 1 |
acinus | 1.88e-08 | 1 |
intrahepatic bile duct | 1.88e-08 | 1 |
portal lobule | 1.88e-08 | 1 |
hepatic acinus | 1.88e-08 | 1 |
mesothelium | 3.57e-08 | 1 |
seminiferous tubule of testis | 3.57e-08 | 1 |
epithelium of male gonad | 3.57e-08 | 1 |
epithelial cord | 3.57e-08 | 1 |
sex cord | 3.57e-08 | 1 |
seminiferous tubule epithelium | 3.57e-08 | 1 |
testis sex cord | 3.57e-08 | 1 |
genital ridge | 3.57e-08 | 1 |
primitive sex cord of indifferent gonad | 3.57e-08 | 1 |
coelomic epithelium | 3.57e-08 | 1 |
umbilical cord | 6.06e-07 | 10 |
blastocyst | 6.06e-07 | 10 |
blastula | 6.06e-07 | 10 |
bilaminar disc | 6.06e-07 | 10 |
inner cell mass | 6.06e-07 | 10 |
cleaving embryo | 6.06e-07 | 10 |
connecting stalk | 6.06e-07 | 10 |
inner cell mass derived epiblast | 6.06e-07 | 10 |
extraembryonic mesoderm | 6.06e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
peripheral primitive neuroectodermal tumor | 1.05e-08 | 1 |
ovarian cancer | 3.70e-08 | 14 |