FFCP PHASE1:Hg19::chr3:165929277..165929294,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C163 | |||
|description=CAGE_peak_at_chr3:165929277..165929294,- | |||
|id=chr3:165929277..165929294,- | |||
|ontology_enrichment_celltype=CL:0000188!7.38e-61!9;CL:0000594!6.50e-30!3;CL:0000183!1.73e-13!59;CL:0002575!1.65e-12!2;CL:0000187!2.17e-10!54;CL:0000680!7.51e-10!57;CL:0000056!7.51e-10!57;CL:0000355!7.51e-10!57;CL:0000393!2.30e-09!60;CL:0000211!2.30e-09!60;CL:0002231!1.51e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0002575;4.52e-50;2!CL:0000669;7.14e-26;4!CL:0000188;2.19e-12;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002575,4.52e-50,2;CL:0000669,7.14e-26,4;CL:0000188,2.19e-12,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002134!1.67e-23!1;UBERON:0005208!1.67e-23!1;UBERON:0005946!1.67e-23!1;UBERON:0005965!1.67e-23!1;UBERON:0002078!1.67e-23!1;UBERON:0002081!1.85e-12!2;UBERON:0002133!1.85e-12!2;UBERON:0001134!3.25e-09!61;UBERON:0002036!3.25e-09!61;UBERON:0003082!3.25e-09!61;UBERON:0002385!6.32e-09!63;UBERON:0001015!6.32e-09!63;UBERON:0000383!6.32e-09!63;UBERON:0003978!9.66e-09!3;UBERON:0009751!9.66e-09!3;UBERON:0004151!9.66e-09!3;UBERON:0000946!9.66e-09!3;UBERON:0002523!9.66e-09!3;UBERON:0005983!9.66e-09!3;UBERON:0004145!9.66e-09!3;UBERON:0002165!9.66e-09!3;UBERON:0002062!9.66e-09!3;UBERON:0007280!9.66e-09!3;UBERON:0004290!4.81e-08!70;UBERON:0000486!7.04e-07!82;UBERON:0000914!8.50e-07!83;UBERON:0002329!8.50e-07!83;UBERON:0003077!8.50e-07!83;UBERON:0003059!8.50e-07!83;UBERON:0007282!8.50e-07!83;UBERON:0009618!8.50e-07!83;UBERON:0007285!8.50e-07!83 | |||
|ontology_enrichment_uberon_v019=UBERON:0001134;1.45e-07;16!UBERON:0002036;1.45e-07;16 | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.43143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290012154876366,0,0.307007349452259,0,0,0.145016693914229,0.170453254832202,12.8206131331302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr3:165929277..165929294,- | |||
}} | |||
Revision as of 22:26, 21 January 2014
| Short description: | p@chr3:165929277..165929294, - |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | No |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_at_chr3:165929277..165929294, - |
| Coexpression cluster: | C163_Skeletal_skeletal_Pericytes_Hepatic_rhabdomyosarcoma_throat_mesenchymal |
| Association with transcript: | NA |
| EntrezGene: | NA |
| HGNC: | NA |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| central nervous system pericyte | 4.52e-50 | 2 |
| pericyte cell | 7.14e-26 | 4 |
| cell of skeletal muscle | 2.19e-12 | 9 |
