FFCP PHASE1:Hg19::chr4:65366184..65366190,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C188 | |||
|description=CAGE_peak_at_chr4:65366184..65366190,- | |||
|id=chr4:65366184..65366190,- | |||
|ontology_enrichment_celltype=CL:0000819!4.54e-09!1 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010227;1.23e-66;1!UBERON:0004140;2.39e-66;1!UBERON:0004872;8.99e-11;7 | |||
|ontology_enrichment_disease=DOID:0060085!4.19e-09!1;DOID:3165!4.19e-09!1;DOID:0060121!4.19e-09!1;DOID:2438!4.19e-09!1;DOID:4418!4.19e-09!1;DOID:0060073!4.54e-09!1;DOID:8675!4.54e-09!1;DOID:2355!9.91e-09!1;DOID:5409!1.21e-08!4;DOID:1287!1.35e-08!4;DOID:0060058!2.80e-07!10 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002081!3.87e-17!2;UBERON:0002133!5.32e-17!2;UBERON:0004151!9.78e-12!3;UBERON:0003978!1.21e-11!3;UBERON:0009751!1.21e-11!3;UBERON:0000946!1.21e-11!3;UBERON:0002523!1.21e-11!3;UBERON:0005983!1.21e-11!3;UBERON:0002165!1.21e-11!3;UBERON:0002062!1.21e-11!3;UBERON:0007280!1.21e-11!3;UBERON:0007100!3.18e-10!27;UBERON:0002079!1.60e-09!1;UBERON:0002135!2.22e-09!1;UBERON:0002134!2.40e-09!1;UBERON:0005208!2.40e-09!1;UBERON:0005946!2.40e-09!1;UBERON:0005965!2.40e-09!1;UBERON:0002078!2.40e-09!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002079;1.23e-66;1!UBERON:0002081;3.61e-34;2!UBERON:0004151;2.62e-23;3!UBERON:0000948;3.77e-13;22!UBERON:0007100;1.03e-11;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002079,1.23e-66,1;UBERON:0002081,3.61e-34,2;UBERON:0010227,3.61e-34,2;UBERON:0004151,2.62e-23,3;UBERON:0000948,3.75e-12,24;UBERON:0005498,3.75e-12,24;UBERON:0004140,3.75e-12,24;UBERON:0009881,3.75e-12,24;UBERON:0004141,3.75e-12,24;UBERON:0003084,3.75e-12,24;UBERON:0007005,3.75e-12,24;UBERON:0004139,3.75e-12,24;UBERON:0004291,3.75e-12,24;UBERON:0007100,6.25e-11,27 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164201178899891,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19871461170299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837847203816763,0,0.717873024576814,0,0.429226048136571,0.89268582976749,2.21705459206197,0,0,0.0787831823072236,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.71756261098694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.237840181555137,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05868461514708,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0,0,0,0,0,0,0.151557396436479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.603821380773079,0 | |||
|short_description=p@chr4:65366184..65366190,- | |||
}} | |||
Revision as of 01:14, 22 January 2014
| Short description: | p@chr4:65366184..65366190, - |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | No |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_at_chr4:65366184..65366190, - |
| Coexpression cluster: | C188_left_heart_tongue_skeletal_Skeletal_diaphragm_throat |
| Association with transcript: | NA |
| EntrezGene: | NA |
| HGNC: | NA |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| left cardiac atrium | 1.23e-66 | 1 |
| cardiac atrium | 3.61e-34 | 2 |
| future cardiac atrium | 3.61e-34 | 2 |
| cardiac chamber | 2.62e-23 | 3 |
| heart | 3.75e-12 | 24 |
| primitive heart tube | 3.75e-12 | 24 |
| primary heart field | 3.75e-12 | 24 |
| anterior lateral plate mesoderm | 3.75e-12 | 24 |
| heart tube | 3.75e-12 | 24 |
| heart primordium | 3.75e-12 | 24 |
| cardiac mesoderm | 3.75e-12 | 24 |
| cardiogenic plate | 3.75e-12 | 24 |
| heart rudiment | 3.75e-12 | 24 |
| primary circulatory organ | 6.25e-11 | 27 |
