FFCP PHASE1:Hg19::chr4:113568122..113568128,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C49 | |||
|description=CAGE_peak_at_chr4:113568122..113568128,- | |||
|id=chr4:113568122..113568128,- | |||
|ontology_enrichment_celltype=CL:0002322!3.95e-29!5;CL:0000039!2.95e-13!7;CL:0000586!2.95e-13!7;CL:0000540!1.70e-09!6;CL:0000031!1.70e-09!6;CL:0000404!1.70e-09!6;CL:0000047!3.19e-07!8;CL:0002591!4.01e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0002322;1.47e-42;5!CL:0000540;8.90e-21;6!CL:0000404;8.90e-21;6!CL:0000039;2.00e-17;7!CL:0000586;2.00e-17;7!CL:0002321;1.88e-14;15!CL:0002591;1.97e-14;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.19e-42,5;CL:0000540,8.91e-21,6;CL:0000031,8.91e-21,6;CL:0000404,8.91e-21,6;CL:0000039,2.58e-17,7;CL:0000586,2.58e-17,7;CL:0000047,9.46e-16,8;CL:0002591,2.11e-14,1 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.23e-21;10!UBERON:0005564;2.23e-21;10!CL:0000031;8.90e-21;6 | |||
|ontology_enrichment_disease=DOID:3095!1.82e-15!22;DOID:2994!1.82e-15!22 | |||
|ontology_enrichment_disease_v019=DOID:3095;3.29e-21;22!DOID:2994;3.29e-21;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,3.47e-21,22;DOID:2994,3.47e-21,22 | |||
|ontology_enrichment_uberon=UBERON:0000473!1.29e-11!8;UBERON:0003135!1.80e-08!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;2.49e-15;8!UBERON:0003135;2.56e-11;11!UBERON:0000991;2.42e-10;21!UBERON:0000078;7.27e-08;2!UBERON:0002012;7.27e-08;2!UBERON:0008886;7.27e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,3.11e-15,8;UBERON:0003135,3.00e-11,11;UBERON:0000991,2.70e-10,21;UBERON:0009196,2.70e-10,21;UBERON:0009117,2.70e-10,21;UBERON:0005564,2.70e-10,21;UBERON:0004176,7.74e-10,22;UBERON:0000078,7.52e-08,2;UBERON:0007497,7.52e-08,2;UBERON:0003643,7.52e-08,2;UBERON:0003504,7.52e-08,2;UBERON:0003469,7.52e-08,2;UBERON:0003496,7.52e-08,2;UBERON:0002012,7.52e-08,2;UBERON:0008886,7.52e-08,2;UBERON:0007303,7.52e-08,2;UBERON:0002061,7.52e-08,2;UBERON:0005432,7.52e-08,2;UBERON:0004363,7.52e-08,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0.267440195783507,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09776335516636,1.98794652482228,2.67246068599892,0.621966330092223,6.30802127189071,8.75945661781992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13008116620243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.05430982083536,4.81388028090318,4.56984371832104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0,0,0,0,0.118193840883968,0,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11294608203896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.42515626790839,1.85751472338282,1.39368351112581,1.63182127587171,1.06886962106224,0.275684698604535,1.0028301571695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr4:113568122..113568128,- | |||
}} |
Revision as of 02:46, 22 January 2014
Short description: | p@chr4:113568122..113568128, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:113568122..113568128, - |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.19e-42 | 5 |
neuron | 8.91e-21 | 6 |
neuroblast | 8.91e-21 | 6 |
electrically signaling cell | 8.91e-21 | 6 |
germ line cell | 2.58e-17 | 7 |
germ cell | 2.58e-17 | 7 |
neuronal stem cell | 9.46e-16 | 8 |
smooth muscle cell of the pulmonary artery | 2.11e-14 | 1 |
Ontology term | p-value | n |
---|---|---|
testis | 3.11e-15 | 8 |
male reproductive organ | 3.00e-11 | 11 |
gonad | 2.70e-10 | 21 |
indifferent external genitalia | 2.70e-10 | 21 |
indifferent gonad | 2.70e-10 | 21 |
gonad primordium | 2.70e-10 | 21 |
external genitalia | 7.74e-10 | 22 |
mixed ectoderm/mesoderm/endoderm-derived structure | 7.52e-08 | 2 |
developing epithelial placode | 7.52e-08 | 2 |
respiratory system arterial blood vessel | 7.52e-08 | 2 |
respiratory system blood vessel | 7.52e-08 | 2 |
respiratory system artery | 7.52e-08 | 2 |
head blood vessel | 7.52e-08 | 2 |
pulmonary artery | 7.52e-08 | 2 |
pulmonary vascular system | 7.52e-08 | 2 |
pharyngeal vasculature | 7.52e-08 | 2 |
truncus arteriosus | 7.52e-08 | 2 |
aortic sac | 7.52e-08 | 2 |
pharyngeal arch artery | 7.52e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 3.47e-21 | 22 |
germ cell cancer | 3.47e-21 | 22 |