FFCP PHASE1:Hg19::chr5:133473836..133473852,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1525 | |||
|description=CAGE_peak_at_chr5:133473836..133473852,- | |||
|id=chr5:133473836..133473852,- | |||
|ontology_enrichment_celltype=CL:0000542!7.13e-12!53;CL:0000051!7.13e-12!53;CL:0000084!1.28e-11!25;CL:0000827!1.28e-11!25;CL:0000838!4.39e-11!52;CL:0000791!1.37e-08!18;CL:0000789!1.37e-08!18;CL:0002420!1.37e-08!18;CL:0002419!1.37e-08!18;CL:0000790!1.37e-08!18 | |||
|ontology_enrichment_celltype_v019=CL:0000624;2.27e-19;6!CL:0000084;1.43e-17;25!CL:0000791;2.31e-11;18!CL:0000789;2.31e-11;18!CL:0002419;2.31e-11;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,1.82e-19,6;CL:0000084,1.27e-17,25;CL:0000827,1.27e-17,25;CL:0000791,2.08e-11,18;CL:0000789,2.08e-11,18;CL:0002420,2.08e-11,18;CL:0002419,2.08e-11,18;CL:0000790,2.08e-11,18;CL:0000838,3.81e-11,52;CL:0000542,6.34e-11,53;CL:0000051,6.34e-11,53 | |||
|ontology_enrichment_development_v019=CL:0000790;2.31e-11;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!4.49e-09!15;UBERON:0000179!4.49e-09!15;UBERON:0000463!4.49e-09!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;4.06e-26;2!UBERON:0005058;4.06e-26;2!UBERON:0009113;4.06e-26;2!UBERON:0004177;4.78e-11;5!UBERON:0005057;4.78e-11;5!UBERON:0000178;4.48e-08;15!UBERON:0000179;4.48e-08;15!UBERON:0000463;4.48e-08;15!UBERON:0002390;5.92e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.11e-13,4;UBERON:0005058,1.11e-13,4;UBERON:0009113,1.11e-13,4;UBERON:0003295,1.11e-13,4;UBERON:0005562,1.11e-13,4;UBERON:0003351,1.99e-09,6;UBERON:0004177,3.33e-08,7;UBERON:0005057,3.33e-08,7;UBERON:0000178,5.25e-08,15;UBERON:0000179,5.25e-08,15;UBERON:0000463,5.25e-08,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0.123766352960047,0,0,0,0,0,0.123121058076788,0,0,0.286235987131057,0,0.376627918784408,0.152826811495903,0.328402357799783,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0.868043482863407,0.223915474239924,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,1.57367816091066,3.14408610199332,1.43921049299656,0,0.32592226663359,0.473447805734733,1.94826728407911,0.111410456885174,0,0,0,0.128091319725675,0,0.493313713811028,0.276350017785848,0,1.18629250529648,0.267540828089713,0,0.113309342697566,0,0.34362744548263,0.506039384039006,0,0,0,0.150575119077773,0.639933055772092,0,0.473554504088034,0,0.403213486449465,0.534880391567015,1.30341963494519,0,0,0,0,0,0,0,0,0,0.221729397462564,0.087834785693126,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0.312160076830321,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0.250237039743928,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.132529768321485,0,0,0,0,0,0,0,0,0.721879481669586,0,0,0,0,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,2.6487785964879,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0.197030760201927,0.862510299438069,1.15508732651774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0.664225598535437,0,0.0868836144680828,0,0,0.82707210449155,0.647142602455851,1.06727557803444,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0.492762936082855,0,0.232420756919918,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0.082509499920588,0,0,0,0.096670718292122,0,0,0.275673144969061,0.214840489736547,0,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,1.13929437434833,0.714695326373367,0,0.648473311192717,0,0.79312517629427,0,0,0,0.185803175125719,0,1.9919716137556,0.318852545457645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,1.02193298195737,0,0,0,0,0.335643173951685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.728341138602278,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0.203996435272644,0,0,0,0,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0.236349546921671,0.0824158583811665,0.13480708770837,0,0,0,0,0,0,0,0,0,0,0,0,0.157363764404994,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0.124980407962107,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464033759878494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0.327609848846413,0,0,0,0.106691729694141,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0.115525666150338,0,0,0.198916222116275,0,0,0,0,0,0.295712172434091,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230467975111559,0,0.0679697329768317,0,0,0.111231401892069,0,0,0,0,0,0,0,0.316027223465453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0.237840181555137,0,0,0,0,0,0,0,0,0,0,0,0,0.187967835959707,0.322289439867886,0.199882311849858,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.55239004098034,1.92431614317159,0,0,0,0,0,0.202056159043763,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0.320568492303233 | |||
|short_description=p@chr5:133473836..133473852,- | |||
}} |
Revision as of 07:25, 22 January 2014
Short description: | p@chr5:133473836..133473852, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:133473836..133473852, - |
Coexpression cluster: | C1525_Hodgkin_chronic_CD4_thymus_Whole_blood_acute |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta T cell | 1.82e-19 | 6 |
T cell | 1.27e-17 | 25 |
pro-T cell | 1.27e-17 | 25 |
mature alpha-beta T cell | 2.08e-11 | 18 |
alpha-beta T cell | 2.08e-11 | 18 |
immature T cell | 2.08e-11 | 18 |
mature T cell | 2.08e-11 | 18 |
immature alpha-beta T cell | 2.08e-11 | 18 |
lymphoid lineage restricted progenitor cell | 3.81e-11 | 52 |
lymphocyte | 6.34e-11 | 53 |
common lymphoid progenitor | 6.34e-11 | 53 |
Ontology term | p-value | n |
---|---|---|
thymus | 1.11e-13 | 4 |
hemolymphoid system gland | 1.11e-13 | 4 |
thymic region | 1.11e-13 | 4 |
pharyngeal gland | 1.11e-13 | 4 |
thymus primordium | 1.11e-13 | 4 |
pharyngeal epithelium | 1.99e-09 | 6 |
hemopoietic organ | 3.33e-08 | 7 |
immune organ | 3.33e-08 | 7 |
blood | 5.25e-08 | 15 |
haemolymphatic fluid | 5.25e-08 | 15 |
organism substance | 5.25e-08 | 15 |