FFCP PHASE1:Hg19::chr5:133880100..133880110,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23338 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=22984 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-15bp_to_ENST00000453515_5end | |||
|coexpression_cluster_id=C78 | |||
|description=CAGE_peak_28_at_PHF15_5end | |||
|id=chr5:133880100..133880110,+ | |||
|ontology_enrichment_celltype=CL:0000945!2.90e-59!24;CL:0000826!2.90e-59!24;CL:0000236!4.06e-30!14;CL:0000542!5.01e-30!53;CL:0000051!5.01e-30!53;CL:0000838!3.12e-26!52;CL:0002087!6.15e-16!119;CL:0000738!3.74e-13!140;CL:0000037!1.00e-11!172;CL:0000566!1.00e-11!172;CL:0002031!2.60e-11!124;CL:0000988!6.34e-11!182;CL:0002032!9.22e-11!165;CL:0000837!9.22e-11!165;CL:0000819!1.80e-10!1 | |||
|ontology_enrichment_celltype_v019=CL:0000785;9.91e-41;1!CL:0000819;9.91e-41;1!CL:0000945;1.07e-15;24!CL:0000542;2.81e-10;53!CL:0002188;3.22e-09;5!CL:1000746;6.04e-07;7!CL:1000612;6.04e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000819,9.91e-41,1;CL:0000785,3.81e-21,2;CL:0000955,3.81e-21,2;CL:0000818,3.81e-21,2;CL:0000954,3.81e-21,2;CL:0000816,3.81e-21,2;CL:0000945,1.13e-15,24;CL:0000826,1.13e-15,24;CL:0000817,1.40e-14,3;CL:0000542,1.19e-12,53;CL:0000051,1.19e-12,53;CL:0002188,3.22e-09,5;CL:0000838,1.15e-07,52;CL:1000746,6.04e-07,7;CL:1000612,6.04e-07,7 | |||
|ontology_enrichment_development_v019=CL:0000954;3.81e-21;2!CL:0000051;2.81e-10;53 | |||
|ontology_enrichment_disease=DOID:0060058!1.08e-14!10;DOID:0060073!1.80e-10!1;DOID:8675!1.80e-10!1;DOID:12603!1.98e-10!1 | |||
|ontology_enrichment_disease_v019=DOID:0060073;9.91e-41;1!DOID:8675;9.91e-41;1!DOID:12603;2.21e-40;1!DOID:0060058;2.70e-36;10!DOID:2531;9.87e-09;51!DOID:0060083;9.87e-09;51 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,9.91e-41,1;DOID:8675,9.91e-41,1;DOID:12603,1.48e-40,1;DOID:0060058,3.05e-36,10;DOID:2531,4.06e-13,51;DOID:0060083,4.06e-13,51 | |||
|ontology_enrichment_uberon=UBERON:0002106!1.89e-12!3;UBERON:0004854!1.89e-12!3;UBERON:0009034!1.89e-12!3;UBERON:0002095!1.89e-12!3;UBERON:0004782!1.89e-12!3;UBERON:0003281!1.89e-12!3;UBERON:0009664!1.89e-12!3;UBERON:0002296!1.89e-12!3;UBERON:0005602!1.89e-12!3;UBERON:0001179!1.89e-12!3;UBERON:0006293!1.89e-12!3;UBERON:0004177!1.58e-11!7;UBERON:0002372!6.91e-10!1;UBERON:0001961!6.91e-10!1;UBERON:0001744!6.91e-10!1;UBERON:0001735!6.91e-10!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0000074;6.04e-07;7!UBERON:0001229;6.04e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010532,6.04e-07,7;UBERON:0000074,6.04e-07,7;UBERON:0001229,6.04e-07,7;UBERON:0001230,6.04e-07,7;UBERON:0003220,6.04e-07,7;UBERON:0005749,6.04e-07,7;UBERON:0004199,6.04e-07,7;UBERON:0004209,6.04e-07,7;UBERON:0004198,6.04e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164201178899891,0.0787107813136792,0,0,0,0,0,0,1.00707360754392,0.995184627411951,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0.800791974072025,0.574752439954483,0,0.954053754535364,0,0.587237189370939,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13733384070897,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48642540100575,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.37191225980366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.62811873847405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469919589899268,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0.202056159043763,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p28@PHF15 | |||
}} |
Revision as of 07:28, 22 January 2014
Short description: | p28@PHF15 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_28_at_PHF15_5end |
Coexpression cluster: | C78_lymphoma_plasma_tonsil_appendix_lymph_seminal_trachea |
Association with transcript: | -15bp_to_ENST00000453515_5end |
EntrezGene: | PHF15 |
HGNC: | 22984 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B-1 B cell | 9.91e-41 | 1 |
mature B cell | 3.81e-21 | 2 |
pre-B-II cell | 3.81e-21 | 2 |
transitional stage B cell | 3.81e-21 | 2 |
small pre-B-II cell | 3.81e-21 | 2 |
immature B cell | 3.81e-21 | 2 |
lymphocyte of B lineage | 1.13e-15 | 24 |
pro-B cell | 1.13e-15 | 24 |
precursor B cell | 1.40e-14 | 3 |
lymphocyte | 1.19e-12 | 53 |
common lymphoid progenitor | 1.19e-12 | 53 |
glomerular endothelial cell | 3.22e-09 | 5 |
lymphoid lineage restricted progenitor cell | 1.15e-07 | 52 |
glomerular cell | 6.04e-07 | 7 |
kidney corpuscule cell | 6.04e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
primitive nephron | 6.04e-07 | 7 |
renal glomerulus | 6.04e-07 | 7 |
renal corpuscle | 6.04e-07 | 7 |
glomerular capsule | 6.04e-07 | 7 |
metanephric mesenchyme | 6.04e-07 | 7 |
glomerular tuft | 6.04e-07 | 7 |
S-shaped body | 6.04e-07 | 7 |
renal vesicle | 6.04e-07 | 7 |
comma-shaped body | 6.04e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 9.91e-41 | 1 |
lymphosarcoma | 9.91e-41 | 1 |
acute leukemia | 1.48e-40 | 1 |
lymphoma | 3.05e-36 | 10 |
hematologic cancer | 4.06e-13 | 51 |
immune system cancer | 4.06e-13 | 51 |