FFCP PHASE1:Hg19::chr6:48036860..48036877,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=442213 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21345 | |||
|TSSclassifier=not | |||
|UniProt=Q6ZW05,B2RPC0,B0QZ29 | |||
|association_with_transcript=-435bp_to_ENST00000339488,NM_001013732,NM_207499,uc003ozf.2,uc011dwm.1_5end | |||
|description=CAGE_peak_7_at_C6orf138_5end | |||
|id=chr6:48036860..48036877,- | |||
|ontology_enrichment_celltype=CL:0000064!5.75e-07!3;CL:0005012!5.75e-07!3;CL:0000067!5.75e-07!3;CL:0002304!5.75e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000333;2.52e-28;5!CL:0000511;1.93e-16;1!CL:0002625;1.93e-16;1!CL:0000216;1.93e-16;1!CL:0002321;7.00e-10;15!CL:0000047;6.93e-09;2!CL:0002253;6.93e-09;2!CL:0002535;6.93e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,2.25e-16,1;CL:0002625,2.25e-16,1;CL:0000216,2.25e-16,1;CL:0002253,5.49e-09,2;CL:0002535,5.94e-09,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:169!2.61e-07!6 | |||
|ontology_enrichment_disease_v019=DOID:169;9.86e-24;6!DOID:0050619;7.57e-17;1!DOID:1357;7.57e-17;1!DOID:171;1.61e-14;10!DOID:3119;1.67e-10;14!DOID:3193;6.93e-09;2!DOID:962;6.93e-09;2!DOID:3095;6.61e-07;22!DOID:2994;6.61e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:169,1.07e-23,6;DOID:0050619,5.53e-17,1;DOID:1357,5.53e-17,1;DOID:171,1.69e-14,10;DOID:3119,1.47e-10,14;DOID:3193,6.42e-09,2;DOID:962,6.42e-09,2;DOID:3095,6.75e-07,22;DOID:2994,6.75e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0001049!7.34e-24!57;UBERON:0005068!7.34e-24!57;UBERON:0006241!7.34e-24!57;UBERON:0007135!7.34e-24!57;UBERON:0002780!1.35e-23!41;UBERON:0001890!1.35e-23!41;UBERON:0006240!1.35e-23!41;UBERON:0003056!2.00e-23!61;UBERON:0002619!4.28e-23!22;UBERON:0003080!6.81e-23!42;UBERON:0002346!1.02e-22!90;UBERON:0001950!1.06e-22!20;UBERON:0003075!1.17e-22!86;UBERON:0007284!1.17e-22!86;UBERON:0001893!4.91e-22!34;UBERON:0000073!1.20e-21!94;UBERON:0001016!1.20e-21!94;UBERON:0001869!1.81e-21!32;UBERON:0002616!7.06e-21!59;UBERON:0002791!2.22e-20!33;UBERON:0000956!6.56e-20!25;UBERON:0000203!6.56e-20!25;UBERON:0002020!7.13e-20!34;UBERON:0003528!7.13e-20!34;UBERON:0005743!5.48e-17!86;UBERON:0001017!9.04e-17!82;UBERON:0000955!1.81e-16!69;UBERON:0006238!1.81e-16!69;UBERON:0000924!1.56e-14!173;UBERON:0006601!1.56e-14!173;UBERON:0004121!3.16e-14!169;UBERON:0000033!5.35e-13!123;UBERON:0000153!5.47e-12!129;UBERON:0007811!5.47e-12!129;UBERON:0001871!1.82e-10!7;UBERON:0000200!6.07e-10!6;UBERON:0000013!8.31e-09!5;UBERON:0002410!8.31e-09!5;UBERON:0000488!9.32e-09!4;UBERON:0000064!4.19e-08!219;UBERON:0001872!4.56e-08!5;UBERON:0002771!8.09e-08!3;UBERON:0000483!1.21e-07!309;UBERON:0000119!1.87e-07!312;UBERON:0007023!2.71e-07!115;UBERON:0001778!5.75e-07!3;UBERON:0001775!5.75e-07!3;UBERON:0000010!7.95e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0000013;2.52e-28;5!UBERON:0002410;2.52e-28;5!UBERON:0001764;7.57e-17;1!UBERON:0001825;7.57e-17;1!UBERON:0001136;1.93e-16;1!UBERON:0001343;1.93e-16;1!UBERON:0004910;1.93e-16;1!UBERON:0004813;1.93e-16;1!UBERON:0000010;4.66e-16;8!UBERON:0003714;6.93e-09;2!UBERON:0006955;6.93e-09;2!UBERON:0004909;6.93e-09;2!UBERON:0004801;6.93e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,2.77e-28,5;UBERON:0002410,2.77e-28,5;UBERON:0001764,5.53e-17,1;UBERON:0001825,5.53e-17,1;UBERON:0001136,2.25e-16,1;UBERON:0001343,2.25e-16,1;UBERON:0004910,2.25e-16,1;UBERON:0005154,2.25e-16,1;UBERON:0005295,2.25e-16,1;UBERON:0004813,2.25e-16,1;UBERON:0005297,2.25e-16,1;UBERON:0005294,2.25e-16,1;UBERON:0010141,2.25e-16,1;UBERON:0005891,2.25e-16,1;UBERON:0000010,4.90e-16,8;UBERON:0006955,5.94e-09,2;UBERON:0004801,5.94e-09,2;UBERON:0003714,6.42e-09,2;UBERON:0004909,7.49e-09,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0.221729397462564,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0.328014645699706,0,0,0,0,0,0,1.6068392984416,0.096670718292122,0.154048617114644,0,0,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0.235624804691373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422008249231538,0.222617410045812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.41320361269025,0,0,0,0,0,0.221158519862449,0,0,0,0,0.0769502585037971,0.227884111694002,0,0,0,0,0.274792780205587,0,1.02193298195737,0,0,0,0,0,0,0,0,0,0,1.94749775767882,0,0,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,1.91530254476886,0,0.171986032471617,0,0,0,0,0,0.225980740780532,0.274083849293502,0,0.443175571691151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0.0674035438541849,0,0,0,0.136203406111576,0,0,0,0,0,0.425246896606173,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26446520348538,0,0,0,0,0,0,0,0,0,0.544017803369474,0.2506898940227,0,0,2.98402782875445,0,0.122026264901963,0.500763722825999,0,0,0.0620964029413835,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0.449803112163605,0,0,0,0,0,0,0.406870733204662,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0.179088841081487,0,0.877136198314828,0,0,0,0.256241518587947,0,0,0.553033744606923,0,0,0,0,0.491545817507439,0,0,0,0,0,0,0,0,2.17420431216208,5.06776613564405,0,0.436838552768056,0,0.212574920101683,0,1.67593475391973,0,0,0,0,0,0.770750701157514,0,0,0.205116364240755,2.26864526599546,0.622415272177961,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405225507710368,0,0.413373593002368,0.253663240775627,0.546974809018219,0,0,0,0,0,0,0,0.227662191351298,0,0,0.171488009437418,0.203909198930495,0.328863867814245,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0,0,0,0.769583617218004,1.66059127923341,0,0,2.35158648180761,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0.543931921527318,0.872701380680755,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0,0,0,0.20686599172379,0,0,0,0,0,0,0,0,0,0,0,0,0.0814032686109745,0.106727345877715,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p7@C6orf138 | |||
}} |
Revision as of 12:15, 22 January 2014
Short description: | p7@C6orf138 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_C6orf138_5end |
Coexpression cluster: | NA |
Association with transcript: | -435bp_to_ENST00000339488, NM_001013732, NM_207499, uc003ozf.2, uc011dwm.1_5end |
EntrezGene: | C6orf138 |
HGNC: | 21345 |
UniProt: | Q6ZW05B2RPC0B0QZ29 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 2.25e-16 | 1 |
seminiferous tubule epithelial cell | 2.25e-16 | 1 |
Sertoli cell | 2.25e-16 | 1 |
epithelial cell of large intestine | 5.49e-09 | 2 |
epithelial cell of cervix | 5.94e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 2.77e-28 | 5 |
autonomic nervous system | 2.77e-28 | 5 |
maxillary sinus | 5.53e-17 | 1 |
paranasal sinus | 5.53e-17 | 1 |
mesothelium | 2.25e-16 | 1 |
seminiferous tubule of testis | 2.25e-16 | 1 |
epithelium of male gonad | 2.25e-16 | 1 |
epithelial cord | 2.25e-16 | 1 |
sex cord | 2.25e-16 | 1 |
seminiferous tubule epithelium | 2.25e-16 | 1 |
testis sex cord | 2.25e-16 | 1 |
genital ridge | 2.25e-16 | 1 |
primitive sex cord of indifferent gonad | 2.25e-16 | 1 |
coelomic epithelium | 2.25e-16 | 1 |
peripheral nervous system | 4.90e-16 | 8 |
uterine epithelium | 5.94e-09 | 2 |
cervix epithelium | 5.94e-09 | 2 |
neural tissue | 6.42e-09 | 2 |
epithelium of gonad | 7.49e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 1.07e-23 | 6 |
paranasal sinus cancer | 5.53e-17 | 1 |
maxillary sinus cancer | 5.53e-17 | 1 |
neuroectodermal tumor | 1.69e-14 | 10 |
gastrointestinal system cancer | 1.47e-10 | 14 |
peripheral nerve sheath neoplasm | 6.42e-09 | 2 |
neurofibroma | 6.42e-09 | 2 |
germ cell and embryonal cancer | 6.75e-07 | 22 |
germ cell cancer | 6.75e-07 | 22 |