FFCP PHASE1:Hg19::chr6:159083954..159083961,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=94120 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15587 | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=172bp_to_uc011efq.1_5end | |||
|coexpression_cluster_id=C12 | |||
|description=CAGE_peak_15_at_SYTL3_5end | |||
|id=chr6:159083954..159083961,+ | |||
|ontology_enrichment_celltype=CL:0000839!2.36e-26!70;CL:0000766!2.37e-26!76;CL:0000557!6.49e-26!71;CL:0002057!2.69e-24!42;CL:0002274!4.25e-24!5;CL:0000457!4.25e-24!5;CL:0002191!4.25e-24!5;CL:0000097!4.25e-24!5;CL:0000831!4.25e-24!5;CL:0002028!4.25e-24!5;CL:0000860!1.99e-22!45;CL:0000738!4.82e-19!140;CL:0000763!6.77e-18!112;CL:0000049!6.77e-18!112;CL:0002194!1.01e-16!63;CL:0000576!1.01e-16!63;CL:0000040!1.01e-16!63;CL:0000559!1.01e-16!63;CL:0002009!4.26e-16!65;CL:0000037!1.20e-15!172;CL:0000566!1.20e-15!172;CL:0002031!1.48e-15!124;CL:0000988!1.98e-14!182;CL:0000842!4.67e-14!3;CL:0000163!2.91e-13!9;CL:0002087!4.03e-13!119;CL:0002032!1.15e-12!165;CL:0000837!1.15e-12!165;CL:0002393!2.11e-12!9;CL:0002397!2.11e-12!9;CL:0000224!1.15e-10!4;CL:0000080!2.97e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000097;6.02e-60;5!CL:0000163;8.87e-34;9!CL:0000766;3.92e-11;69!CL:0000151;3.96e-09;36!CL:0000860;5.08e-09;33!CL:0002057;5.08e-09;33!CL:0000473;1.19e-07;39!CL:0000234;1.19e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,6.03e-60,5;CL:0002028,6.03e-60,5;CL:0000163,8.87e-34,9;CL:0000839,3.91e-18,66;CL:0000557,7.10e-18,67;CL:0000766,1.10e-16,72;CL:0000763,2.52e-11,108;CL:0000049,2.52e-11,108;CL:0002031,3.06e-10,120;CL:0000738,4.36e-09,136;CL:0000151,4.60e-09,36;CL:0000860,8.93e-08,42;CL:0002057,8.93e-08,42;CL:0002032,9.83e-08,161;CL:0000837,9.83e-08,161;CL:0000037,2.00e-07,168;CL:0000988,4.60e-07,177;CL:0000473,6.92e-07,48;CL:0000234,6.92e-07,48 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.89e-36!102;UBERON:0003061!5.89e-36!102;UBERON:0002193!3.81e-32!112;UBERON:0002371!1.91e-22!80;UBERON:0001474!1.56e-20!86;UBERON:0002405!3.96e-17!115;UBERON:0004765!9.59e-17!101;UBERON:0001434!9.59e-17!101;UBERON:0003081!1.77e-14!216;UBERON:0000178!3.24e-14!15;UBERON:0000179!3.24e-14!15;UBERON:0000463!3.24e-14!15;UBERON:0002204!3.69e-09!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.61e-16,76;UBERON:0001474,9.81e-15,82;UBERON:0004765,1.76e-13,90;UBERON:0002405,4.60e-13,93;UBERON:0002390,2.00e-12,98;UBERON:0003061,2.00e-12,98;UBERON:0001434,3.45e-12,100;UBERON:0002193,2.52e-11,108;UBERON:0002204,1.81e-07,167 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0,0,0,0,0,0,0,0,0.401088894940283,0,0,0,0,0.290796477559129,0,0.727752183563449,0.232429036905685,0,0,0,0,0,0.689491361473237,0,0,0.188242339542605,0,0,0,0,0.639337125799041,0,0.199463657621632,0,0.290209238628584,0,0,0,0,0,0,0,0,0.633765858935825,0.212604299965044,0.419317291016752,1.23561494261145,1.05123824989054,1.12507910687956,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0.44024217006613,3.31724984865235,3.60299883542404,4.67097003677606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0.206768026122887,0.431428401637234,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0.569647187174163,0,0,0.648473311192717,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124149428591716,0,0,0.202117188958219,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p15@SYTL3 | |||
}} |
Revision as of 14:52, 22 January 2014
Short description: | p15@SYTL3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_SYTL3_5end |
Coexpression cluster: | C12_Mast_Basophils_immature_chorionic_mature_CD14_Eosinophils |
Association with transcript: | 172bp_to_uc011efq.1_5end |
EntrezGene: | SYTL3 |
HGNC: | 15587 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 6.03e-60 | 5 |
basophil mast progenitor cell | 6.03e-60 | 5 |
endocrine cell | 8.87e-34 | 9 |
myeloid lineage restricted progenitor cell | 3.91e-18 | 66 |
granulocyte monocyte progenitor cell | 7.10e-18 | 67 |
myeloid leukocyte | 1.10e-16 | 72 |
myeloid cell | 2.52e-11 | 108 |
common myeloid progenitor | 2.52e-11 | 108 |
hematopoietic lineage restricted progenitor cell | 3.06e-10 | 120 |
leukocyte | 4.36e-09 | 136 |
secretory cell | 4.60e-09 | 36 |
classical monocyte | 8.93e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.93e-08 | 42 |
hematopoietic oligopotent progenitor cell | 9.83e-08 | 161 |
hematopoietic multipotent progenitor cell | 9.83e-08 | 161 |
hematopoietic stem cell | 2.00e-07 | 168 |
hematopoietic cell | 4.60e-07 | 177 |
defensive cell | 6.92e-07 | 48 |
phagocyte | 6.92e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.61e-16 | 76 |
bone element | 9.81e-15 | 82 |
skeletal element | 1.76e-13 | 90 |
immune system | 4.60e-13 | 93 |
hematopoietic system | 2.00e-12 | 98 |
blood island | 2.00e-12 | 98 |
skeletal system | 3.45e-12 | 100 |
hemolymphoid system | 2.52e-11 | 108 |
musculoskeletal system | 1.81e-07 | 167 |