FFCP PHASE1:Hg19::chr7:16844611..16844628,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10551 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=328 | |||
|TSSclassifier=not | |||
|UniProt=B5MC07 | |||
|association_with_transcript=0bp_to_ENST00000401412,ENST00000468419,ENST00000486219,ENST00000489523_5end | |||
|coexpression_cluster_id=C4669 | |||
|description=CAGE_peak_1_at_AGR2_5end | |||
|id=chr7:16844611..16844628,- | |||
|ontology_enrichment_celltype=CL:0000066!6.21e-20!254;CL:0000223!3.40e-16!59;CL:0002076!4.58e-16!43;CL:0002368!1.23e-08!13;CL:0002251!1.87e-07!21 | |||
|ontology_enrichment_celltype_v019=CL:0002076;2.06e-15;42!CL:0002368;5.50e-10;13!CL:0002251;1.14e-08;20!CL:0000082;6.21e-07;19!CL:0002202;9.71e-07;9!CL:0002632;9.71e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.75e-20,253;CL:0002076,3.80e-19,42;CL:0000223,8.17e-19,58;CL:0002368,5.48e-10,13;CL:0002251,1.23e-08,20;CL:0000082,6.29e-07,19;CL:0002202,9.89e-07,9;CL:0002632,9.89e-07,9 | |||
|ontology_enrichment_development_v019=UBERON:0001041;5.09e-10;30!CL:0000223;6.86e-10;58!UBERON:0006595;4.37e-09;86 | |||
|ontology_enrichment_disease=DOID:305!1.84e-18!106;DOID:0050687!1.85e-09!143;DOID:1749!2.65e-09!14;DOID:299!1.50e-08!25 | |||
|ontology_enrichment_disease_v019=DOID:299;1.74e-09;25!DOID:1749;1.84e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.51e-16,106;DOID:1749,1.61e-09,14;DOID:299,1.74e-09,25;DOID:0050687,4.15e-09,143 | |||
|ontology_enrichment_uberon=UBERON:0004119!4.77e-33!169;UBERON:0000925!4.77e-33!169;UBERON:0006595!4.77e-33!169;UBERON:0001007!5.32e-27!155;UBERON:0001555!5.32e-27!155;UBERON:0007026!5.32e-27!155;UBERON:0004921!6.77e-25!129;UBERON:0004185!6.77e-25!129;UBERON:0000077!9.17e-22!130;UBERON:0001041!4.61e-16!98;UBERON:0000466!6.03e-16!126;UBERON:0005177!6.64e-16!107;UBERON:0005911!3.16e-15!82;UBERON:0001004!2.98e-14!72;UBERON:0000464!1.86e-13!104;UBERON:0000062!1.15e-12!511;UBERON:0000481!1.75e-12!347;UBERON:0003104!3.75e-11!238;UBERON:0009142!3.75e-11!238;UBERON:0000065!6.28e-11!53;UBERON:0009569!6.53e-11!113;UBERON:0005409!2.58e-10!35;UBERON:0005181!3.01e-10!35;UBERON:0005178!6.44e-10!34;UBERON:0002224!6.44e-10!34;UBERON:0005153!6.52e-10!37;UBERON:0000922!7.70e-09!612;UBERON:0005157!7.89e-09!51;UBERON:0000468!1.39e-08!659;UBERON:0000160!1.50e-08!27;UBERON:0007023!1.54e-08!115;UBERON:0002048!1.81e-08!22;UBERON:0000117!1.81e-08!22;UBERON:0000171!1.81e-08!22;UBERON:0000170!1.81e-08!22;UBERON:0005597!1.81e-08!22;UBERON:0000118!1.81e-08!22;UBERON:0002050!3.79e-08!605;UBERON:0005423!3.79e-08!605;UBERON:0008947!3.84e-08!38;UBERON:0003258!3.84e-08!38;UBERON:0000064!4.16e-08!219;UBERON:0000915!4.68e-08!52;UBERON:0000923!7.03e-08!604;UBERON:0005291!7.03e-08!604;UBERON:0006598!7.03e-08!604;UBERON:0002532!7.03e-08!604;UBERON:0000161!1.36e-07!35;UBERON:0005631!1.68e-07!14;UBERON:0000158!1.68e-07!14;UBERON:0002100!1.74e-07!216;UBERON:0000467!2.35e-07!625;UBERON:0000480!2.93e-07!626;UBERON:0000072!3.34e-07!46;UBERON:0000344!5.21e-07!12;UBERON:0003929!5.57e-07!54 | |||
|ontology_enrichment_uberon_v019=UBERON:0004921;3.73e-12;33!UBERON:0005409;3.50e-10;22!UBERON:0005181;8.15e-10;35!UBERON:0005178;8.96e-10;34!UBERON:0002224;8.96e-10;34!UBERON:0002048;2.96e-09;22!UBERON:0000117;2.96e-09;22!UBERON:0000171;2.96e-09;22!UBERON:0000170;2.96e-09;22!UBERON:0000160;9.81e-09;17!UBERON:0004807;1.66e-08;22!UBERON:0005911;3.47e-08;36!UBERON:0001555;7.80e-08;54!UBERON:0001007;3.51e-07;81!UBERON:0004802;6.21e-07;19!UBERON:0000115;6.21e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.54e-31,160;UBERON:0000925,1.54e-31,160;UBERON:0006595,1.54e-31,160;UBERON:0001007,3.70e-25,145;UBERON:0001555,3.70e-25,145;UBERON:0007026,3.70e-25,145;UBERON:0004921,1.18e-23,118;UBERON:0005911,1.16e-16,82;UBERON:0005177,1.35e-16,101;UBERON:0001041,6.65e-14,87;UBERON:0001004,7.36e-14,74;UBERON:0005181,9.31e-12,35;UBERON:0009569,1.07e-11,112;UBERON:0005153,1.95e-11,37;UBERON:0005178,2.27e-11,34;UBERON:0002224,2.27e-11,34;UBERON:0000065,1.15e-10,54;UBERON:0001008,2.15e-10,48;UBERON:0011216,2.40e-10,223;UBERON:0006554,7.22e-10,47;UBERON:0000915,7.42e-10,52;UBERON:0002048,3.00e-09,22;UBERON:0000117,3.00e-09,22;UBERON:0000171,3.00e-09,22;UBERON:0000170,3.00e-09,22;UBERON:0005597,3.00e-09,22;UBERON:0000118,3.00e-09,22;UBERON:0005157,7.29e-09,47;UBERON:0000160,9.92e-09,17;UBERON:0005409,2.20e-08,25;UBERON:0000161,2.70e-08,36;UBERON:0002100,1.12e-07,199;UBERON:0005631,1.15e-07,14;UBERON:0000158,1.15e-07,14;UBERON:0008947,1.55e-07,38;UBERON:0003258,1.55e-07,38;UBERON:0003929,2.13e-07,54;UBERON:0004807,3.50e-07,28;UBERON:0004802,6.29e-07,19;UBERON:0000115,6.29e-07,19 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.783556884599516,58.2389429508576,51.6372864299596,713.429521377143,513.818073589028,11.8815698841645,14.5814845320283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.18003532953405,11.0330546937471,12.04823675113,392.309004786962,0.542270404062111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,71.4371413107375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0.973269740605272,0,0,0,17.8131542676889,9.83597278389864,3.70784442784429,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,1.95249646038536,0,0,0,0,0,0,0,0,0,0,38.376276588543,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1409436430889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.08326009867495,23.4561663708118,6.02289650316908,0,0,0.348581828608555,0.10366105501537,0,0,0,0,0,0,0,0,0,0.241011029883482,0.110293972732394,0.435758888184812,0,0,0,0,0,0,17.2861084759188,0,10.1404027857465,0,0.590789906681404,0,1053.51896456031,0,1.53650399572076,48.3327539007764,0.904760751704678,96.9401020809805,0,0,0,0,0,0,0,0,522.325107051081,635.279759950206,0,0,0,122.791322522678,4.53551746136921,10.7749073904214,1.34337784054272,1.74380363108377,4.21720947081732,0,0,0,0.432359860250884,0.12624243342638,0,0,0,51.3217338068116,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.20844685094452,1.00034104211935,6.23909554509392,0,0,0,0,0.300946099727719,0,7.24311499047534,0,0,0,0,0,0,0,0,160.051357723625,520.942925667856,39.3107381328584,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,1452.97230299048,8.02025881213139,43.3701457888072,0,0,0,31.5839729035188,32.7315182693763,0,4.38417673959782,5.06647818685803,0,0,0,0,1.35473218771926,0,18.6059679322878,14.1282921517883,7.83561641527624,0,0,0,0,0,46.5745372647705,0,0,0,0,0,0,0,0,0,0,0,0,0,360.321115486932,46.7021863697208,9.95379157457756,711.139199414516,0,0,0,0,0,0,0,0.143124886741991,0.372158369359667,0,0,0,0,0,0,0,0,0.235624804691373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,67.644145246035,49.6023683896483,81.6682386459919,49.1430640054787,13.3456665528081,6.73885902670502,12.8594744525636,24.5804038221447,0,0,0,0,0,0,0,0,0,0,115.658981943047,0,0,0,0,0,16.4694618313835,0,0,0,0,0,0,0.169291777801603,0,0,2.55507742614196,0,0,0,0,0,0,0,0,0,0,6075.51764435286,0,0,0,0,152.318981262646,207.875276582847,52.2173193568695,0,0,0.556543525114529,0,1.90012867315194,67.7443160053637,176.269138108872,9.32151167060821,0,0,0,185.038935012346,903.877910937151,0,59.383330193434,2.3948309234694,0,0,0,0,49.4812746061943,593.853399974169,30.4499821682613,461.660019694272,381.380475439149,240.642660039759,0,0,0,0,0,0,0,0,0.219385397153973,0,2.09135616417905,233.620984817528,0,0,0,0,34.1331240913154,0.366390373607449,8.52855641629816,0,0,0,0,0,0,0,0,0,10.6101325303446,493.18086623302,0,805.16690224251,269.087911219158,532.207256237188,0,0,0,9.43615861729479,1.60515529459758,0,0,243.211121332588,0,1116.27927566093,941.307770858605,1.22429104652196,0.442306057399416,0,0.103688191397247,7.97584647248622,0,2.19753042885058,1.19472429772959,58.6295664821373,0,1787.83886459018,5.58556665261953,0.174118413160805,368.3238166542,0,6.09564887121236,3.21592995179216,4.92692742319255,27.9328367486648,20.7401897725026,79.3192400139669,0,0,0.0633107959558787,91.9091498853574,61.3214974924233,1077.08381145477,0,4092.74420884523,0.114536596165916,12.1832448481995,11.0922194450875,0.124252535565433,2.82832841540154,0,0,0,0,0,0,0,0.429765441419957,0,0.279282401272254,0.229160424011684,0,182.10724845508,1.28767814440971,0,1.00775208730089,0,297.064671295007,1.41809728153003,1.2362378757175,1.88729922791718,487.806598387095,0,0,0,0,0,0,0,0,0.364497339948148,47.6317256390958,20.2530667758939,15.3167397354194,0,293.493374487867,9.59575986597226,0,0,0,0,0,0,0,0,0,0,1.75862680413699,1.32506888912221,0,0,3258.00665383128,322.805280221036,144.910518854362,343.963019558069,171.494968913739,0,0,0,44.0455467861425,0,0,0,0,46.8021206825698,0,0,0.1251909307065,0,0.221858103073705,1.17983165588629,0,277.706466491801,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0.300515217994437,0,0,0,0,0,0,0,0,0,0,0,0.857766365499703,0,0,0,0,0,113.021329660916,0,0,0,0,0,0,0,0,0,0,0,0,7.37318726261158,350.566812651962,0,0,0,0,0,219.470947611808,64.6960350434292,0,0,0,0,0,0,0,0,0,0,2.40171224485641,0.352675943690684,0,0.128458450192919,0,0,0.205116364240755,1.00828678488687,0,0,1.42769420259154,23.9480433142502,393.075118194671,57.5965799358072,3.81234698296116,0,3.4517996303005,0,27.9782421459237,0,366.53007126832,0,0,130.113355871,0.0675375846183947,0,0,0.0634158101939068,3.82882366312754,16.4477330057155,133.48080698672,0,312.63466043409,0,0,120.179189638853,80.5924157383593,10.1120701985408,0,0,0.0679697329768317,0.131545547125698,0,372.291502132755,135.636064445688,0,78.4762057278609,106.839570299611,3.67076905071656,0,0.571812353413251,0,0,0,0,1.03608082081518,0.3414369541879,0,426.355312590895,0,0,1096.9958470447,19.0158700891562,0,0,0.223710863595585,474.065628361624,652.504734505106,0.647428837187895,0,6.95888658802919,96.1707766257096,0,0.994753875806841,0,0.11294608203896,0,20.5309467250676,406.707813228868,478.86399706417,0,15.444344270496,248.167404098012,0,0,8.453114551668,0,0.0939839179798536,0.773494655682926,0,82.6704735744195,7.76368717774522,188.246246252789,2274.26751299965,72.0204974945129,0,0,0,1.30905207102113,1241.62599468964,0,0,0,0,0,0,0,0,0,0,5.68340236636796,2.67964130156179,0,0,120.690433755955,78.7993268144981,1.16260037704811,1.86224142887574,0.112131862580613,2.92776928079559,7.47833599145411,133.895799956631,122.177288487445,652.910801923411,1402.24083763222,1592.11246642922,219.951631786853,0,0,3.77265848847665,281.569130884145,37.1613990315914,13.8344700627351,27.296027741606,1.00636896795513,0 | |||
|short_description=p1@AGR2 | |||
}} |
Revision as of 15:48, 22 January 2014
Short description: | p1@AGR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AGR2_5end |
Coexpression cluster: | C4669_adenocarcinoma_gastric_lung_stomach_endometrioid_trachea_Prostate |
Association with transcript: | 0bp_to_ENST00000401412, ENST00000468419, ENST00000486219, ENST00000489523_5end |
EntrezGene: | AGR2 |
HGNC: | 328 |
UniProt: | B5MC07 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.75e-20 | 253 |
endo-epithelial cell | 3.80e-19 | 42 |
endodermal cell | 8.17e-19 | 58 |
respiratory epithelial cell | 5.48e-10 | 13 |
epithelial cell of alimentary canal | 1.23e-08 | 20 |
epithelial cell of lung | 6.29e-07 | 19 |
epithelial cell of tracheobronchial tree | 9.89e-07 | 9 |
epithelial cell of lower respiratory tract | 9.89e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.51e-16 | 106 |
squamous cell carcinoma | 1.61e-09 | 14 |
adenocarcinoma | 1.74e-09 | 25 |
cell type cancer | 4.15e-09 | 143 |