FFCP PHASE1:Hg19::chr7:84121969..84121978,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10371 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10723 | |||
|TSSclassifier=strong | |||
|UniProt=C9JD25 | |||
|association_with_transcript=61bp_to_ENST00000424555_5end | |||
|coexpression_cluster_id=C2002 | |||
|description=CAGE_peak_24_at_SEMA3A_5end | |||
|id=chr7:84121969..84121978,- | |||
|ontology_enrichment_celltype=CL:0002620!1.08e-30!23;CL:0000057!5.52e-20!75;CL:0000055!3.39e-09!180 | |||
|ontology_enrichment_celltype_v019=CL:0002620;5.42e-34;23!CL:0002149;1.74e-07;6!CL:0002255;1.74e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,3.90e-34,23;CL:0000057,9.64e-12,76;CL:0002149,1.63e-07,6;CL:0002255,1.63e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!8.85e-16!5;DOID:450!8.85e-16!5;DOID:66!8.85e-16!5;DOID:423!8.85e-16!5;DOID:0080000!8.85e-16!5;DOID:11722!8.85e-16!5 | |||
|ontology_enrichment_disease_v019=DOID:17;1.71e-18;5!DOID:450;1.71e-18;5!DOID:66;1.71e-18;5!DOID:423;1.71e-18;5!DOID:0080000;1.71e-18;5!DOID:11722;1.71e-18;5!DOID:3001;1.74e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.66e-18,5;DOID:450,1.66e-18,5;DOID:66,1.66e-18,5;DOID:423,1.66e-18,5;DOID:0080000,1.66e-18,5;DOID:11722,1.66e-18,5;DOID:3001,1.63e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0002097!4.41e-18!40;UBERON:0002199!1.42e-17!45;UBERON:0002416!1.42e-17!45;UBERON:0003102!5.20e-12!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;5.89e-14;41!UBERON:0002199;6.83e-12;46!UBERON:0002416;6.83e-12;46!UBERON:0005795;3.45e-11;1!UBERON:0003102;1.88e-09;50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,1.16e-18,41;UBERON:0002199,1.65e-16,46;UBERON:0002416,1.65e-16,46;UBERON:0003102,1.11e-08,99 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0.37129905888014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,1.15877215168659,0,0.973269740605272,0.0945348171640679,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0.576175924479999,0.234321431833797,0,0,0.149448680551801,0,0,0.140450806702248,0,0,0.103325781175765,0,0,0,0,0.336672227908132,0.125118519871964,0,0,0,0,0,0.717558542755448,0.427114777637135,1.05965950579781,1.80054657650641,2.16410311400722,1.8034837803194,2.23340227597908,3.03797398034279,0.876933046450788,2.01947019395292,2.30124746605748,1.61646056818812,0.355009592516614,0.302256294682921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,1.03993478527958,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.531876233169741,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0.49076596687656,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308419387605311,0,0.328508624055237,0,0.232420756919918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.09714191347956,0,0,0,0,0,0,0,0,0,0,0,0,0.503865495708552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.957003479195758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485560759068186,0,0,0,0,0,0,0,0,0,0,0,1.38674673013139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37443915399099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0.544017803369474,0.7520696820681,0.306345576763462,0,0,0,0,0,0,0,0.0620964029413835,0.138348634936231,0,0,0,0,0.936669811613763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218419276384028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354809480650555,0,0,0,0,0,0,0,0,3.36326595976547,0,0,0,0.214429632529969,0,1.16241425368125,0.173858272302579,0,0,0,0.691259661814092,0,0,0,0,1.3746412112643,0,0,0,0,0,0,0,0,0,0,0.397901550322736,0.118920090777569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.917458566809082,0,5.20646155237509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.62758471326295,0,0,0 | |||
|short_description=p24@SEMA3A | |||
}} |
Revision as of 17:41, 22 January 2014
Short description: | p24@SEMA3A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_24_at_SEMA3A_5end |
Coexpression cluster: | C2002_synovial_adrenal_endometrial_gastric_Fibroblast_rectal_small |
Association with transcript: | 61bp_to_ENST00000424555_5end |
EntrezGene: | SEMA3A |
HGNC: | 10723 |
UniProt: | C9JD25 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 3.90e-34 | 23 |
fibroblast | 9.64e-12 | 76 |
epithelial cell of uterus | 1.63e-07 | 6 |
stromal cell of endometrium | 1.63e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
skin of body | 1.16e-18 | 41 |
integument | 1.65e-16 | 46 |
integumental system | 1.65e-16 | 46 |
surface structure | 1.11e-08 | 99 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.66e-18 | 5 |
myotonic disease | 1.66e-18 | 5 |
muscle tissue disease | 1.66e-18 | 5 |
myopathy | 1.66e-18 | 5 |
muscular disease | 1.66e-18 | 5 |
myotonic dystrophy | 1.66e-18 | 5 |
female reproductive endometrioid cancer | 1.63e-07 | 6 |