FFCP PHASE1:Hg19::chr7:99277610..99277626,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1577 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2638 | |||
|TSSclassifier=not | |||
|UniProt=P20815,Q7Z3N0,F5H4S0,B7Z5I7 | |||
|association_with_transcript=0bp_to_ENST00000222982,ENST00000339843,ENST00000343703,ENST00000439761,ENST00000456417,ENST00000461920,ENST00000463907,ENST00000466061,ENST00000469622,ENST00000481825,ENST00000489231,NM_000777,NM_001190484,NR_033807,NR_033808,NR_033809,NR_033810,NR_033811,NR_033812_5end | |||
|coexpression_cluster_id=C211 | |||
|description=CAGE_peak_1_at_CYP3A5_5end | |||
|id=chr7:99277610..99277626,- | |||
|ontology_enrichment_celltype=CL:0000223!2.74e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0001014;9.49e-08;2!CL:0001016;9.49e-08;2!CL:0000182;5.33e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,9.50e-08,2;CL:0001016,9.50e-08,2;CL:0000182,5.80e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0009497;1.03e-08;13!UBERON:0006595;1.98e-08;86!UBERON:0004161;1.72e-07;11!UBERON:0003104;4.25e-07;31 | |||
|ontology_enrichment_disease=DOID:0050687!3.11e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:4929;4.07e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4929,3.94e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0004921!3.61e-17!129;UBERON:0004185!3.61e-17!129;UBERON:0007023!6.31e-15!115;UBERON:0004119!7.56e-14!169;UBERON:0000925!7.56e-14!169;UBERON:0006595!7.56e-14!169;UBERON:0001007!1.06e-13!155;UBERON:0001555!1.06e-13!155;UBERON:0007026!1.06e-13!155;UBERON:0000077!5.89e-13!130;UBERON:0005409!3.47e-12!35;UBERON:0000160!1.70e-10!27;UBERON:0001041!6.33e-10!98;UBERON:0009497!7.57e-08!25;UBERON:0000015!7.57e-08!25;UBERON:0002423!7.57e-08!25;UBERON:0006235!7.57e-08!25;UBERON:0004161!7.57e-08!25;UBERON:0009854!8.22e-08!23;UBERON:0008835!5.04e-07!22;UBERON:0003894!5.04e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0005409;2.29e-18;22!UBERON:0000160;6.69e-17;17!UBERON:0004921;1.61e-14;33!UBERON:0002423;7.76e-12;25!UBERON:0002108;8.97e-12;4!UBERON:0001155;9.00e-09;9!UBERON:0001007;2.29e-08;81!UBERON:0002107;5.01e-08;19!UBERON:0006925;5.01e-08;19!UBERON:0000059;4.09e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004921,3.25e-23,118;UBERON:0001007,1.08e-18,145;UBERON:0001555,1.08e-18,145;UBERON:0007026,1.08e-18,145;UBERON:0000160,5.38e-17,17;UBERON:0004119,3.93e-16,160;UBERON:0000925,3.93e-16,160;UBERON:0006595,3.93e-16,160;UBERON:0005409,5.35e-16,25;UBERON:0009854,7.50e-13,23;UBERON:0003929,7.75e-12,54;UBERON:0009497,8.01e-12,25;UBERON:0000015,8.01e-12,25;UBERON:0002423,8.01e-12,25;UBERON:0006235,8.01e-12,25;UBERON:0004161,8.01e-12,25;UBERON:0002108,8.98e-12,4;UBERON:0009856,4.00e-11,26;UBERON:0008835,4.62e-11,22;UBERON:0003894,4.62e-11,22;UBERON:0011216,1.47e-10,223;UBERON:0001041,5.11e-10,87;UBERON:0005911,1.09e-09,82;UBERON:0007499,1.60e-09,25;UBERON:0001155,7.34e-09,9;UBERON:0007023,3.29e-08,114;UBERON:0005177,4.68e-08,101;UBERON:0002107,5.30e-08,19;UBERON:0006925,5.30e-08,19;UBERON:0008836,5.30e-08,19;UBERON:0000949,5.62e-08,45;UBERON:0000059,3.47e-07,11;UBERON:0001046,4.19e-07,19 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.870627715885752,0.56738522469114,1.24564449799115,0,0,0,0.605399502633369,0.736555271975129,1.26584954976354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,2.03017567021455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0.298897361103602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0,0,0,0.134831308160164,0,0.38474715694639,0,0,0,0,74.7854705448802,51.1070152672366,122.884300589732,0,10.5770057147078,0,0,0,0.100528972411631,0,0,0,0,0,0,0.288732895522148,0,0.190254152234598,0,0,0,0.234004265139238,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0.299918973546171,0,0,0,0,0,0,0.868687840005475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164254312027618,0,0,2.77976734060731,0.200506470303285,1.74953878978203,0,0,0.393373244878272,0,0,0,0,0.633309773357254,0,0,0,0,0,0,0,0,0,1.09629938322967,0.261435451024901,0,0,0,59.9698687789744,0,0,0,0,0,0,0,0,0,0,0,0,0,0.495854746082934,0,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487426979262569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0.211107635297664,0,0,0,0,0,0,52.9088160365499,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.30423242938906,0.879049075631364,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0.19924798825107,1.93398740871803,0,0,0,0,0.0898683511473268,2.50629644545853,0,2.36744173528641,0,0,0.969332746095218,0.0927680981618513,0,0,0,0,0.227586896570999,0,0,0,0,0,0,0.120596438625408,0,0.221158519862449,0,0.438770794307945,0,0.278847488557207,2.23155749661011,0,0.23056390438806,0.359030577639089,0.217294743844016,0,0.0915975934018623,0,0,0,0,0,0,0,0.189753732724185,0,0,0,1.55488378577335,0,2.98578579323551,45.8210184127297,7.33236173920351,0,0,0,0.202203398942031,0,0,0,0.19566461893209,0,0.789168805698781,9.67925728389311,0.30607276163049,2.71702292402498,0.60129367765797,0,0,0.330991955875499,0,0,1.70765727617876,0,0,0,0,0,0,0,0,0,4.75246180793255,0,0,0,0.397429223405979,0,0,0.160317640503067,10.0322907527496,0.19980960958213,1.58499458869517,0,4.80465994013501,0.14405479798815,0,0,0.543616824294456,0.313808538937,0,0,0,0,0,0,0,0,0,0,0,0.429226048136571,0,0.0671834724867263,0,1.16495949527454,0.315132729228895,0.412079291905832,0.404421263125109,8.95690081784214,0,0,0,0,0,0,2.4747128070665,30.17827622776,0.182248669974074,0,8.11698785181741,0.734364233889974,0,0.537862017998534,0,0.714695326373367,0,0,0.542999601753713,0,1.63293680054705,0,0,0.340776043570843,0,88.957205842596,5.30027555648885,0.387848869084652,0,1.19760786519031,0.704815022316672,3.63077202730162,2.20086027139532,0.414239055347196,0,0,0,0,0,0.5013797880454,0.919036730290385,0.327872630709804,0,0,0,0.250381861413,0,0.332787154610557,0.745156835296601,0,0,0,0,0,0,0,0.149254802886874,0.233713309847224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0.336749488765919,0,0,0,0,0,0,0,0.179088841081487,0.617602894321944,0,0,0.192914038270915,0,2.04993214870357,0,0.303859956177382,0.276516872303462,0,0,0,0.327609848846413,0,0.422624246717254,0,0,0,0,0.184105950251841,0.279759015438889,0,0,0.431299245586727,0.314531883711793,0,0.169732529954025,0,4.95743057036009,0,0,0,0,0,0,0,0,0,0,0,0.276629009856872,0,0,0.0981477185010256,0.353909170043221,0,0,0,0,0,0.300841313397029,0,1.56302802246618,1.30953347240711,0,15.9684573114409,0.135075169236789,0,0.206686796501184,0,0,0,2.48105589194647,0.175871244359621,0,0.535701835878287,0,0,2.04895972216168,0.177404740325278,0,0,0.271878931907327,0.0657727735628491,0,0,1.96232732126285,0,0.560544326627578,0.913158720509496,11.0123071521497,5.25526856675755,0,0,0,0,0,0,0.17071847709395,0,0,0,0.0852134047591577,0.423387050190929,0.22910686854405,0.31020638566432,0,0,0.588901401691458,9.50959814861701,0,0,0,0.971421986118279,0,0,0,0,0.109940516745429,0,98.1655291133056,20.1074795663641,1.88126918544609,0.245148321753905,0.942706188406504,0.196308467114945,0,0,0,0,0.0644578879735772,0,0.535661815816973,0,0,5.11235471772562,0,0,0,0.0679914901909147,0,15.3417783749466,0,0.462175628631418,0,0,0,0,0.203977659483963,0,0,0,0.454672189309436,0,0,0,4.26467963801962,0.23806443146374,0.129177819672012,1.73809200028402,0,0,0,2.61260097476354,4.10679961302337,5.25346013513783,1.36272190246085,0,0,0,0,15.8092355707593,0,0.366724332548599,0,3.32878387092756,0.201273793591026,0 | |||
|short_description=p1@CYP3A5 | |||
}} |
Revision as of 18:11, 22 January 2014
Short description: | p1@CYP3A5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CYP3A5_5end |
Coexpression cluster: | C211_small_Hepatocyte_liver_colon_temporal_duodenum_kidney |
Association with transcript: | 0bp_to_ENST00000222982, ENST00000339843, ENST00000343703, ENST00000439761, ENST00000456417, ENST00000461920, ENST00000463907, ENST00000466061, ENST00000469622, ENST00000481825, ENST00000489231, NM_000777, NM_001190484, NR_033807, NR_033808, NR_033809, NR_033810, NR_033811, NR_033812_5end |
EntrezGene: | CYP3A5 |
HGNC: | 2638 |
UniProt: | P20815Q7Z3N0F5H4S0B7Z5I7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 9.50e-08 | 2 |
immature CD1a-positive Langerhans cell | 9.50e-08 | 2 |
hepatocyte | 5.80e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
subdivision of digestive tract | 3.25e-23 | 118 |
digestive system | 1.08e-18 | 145 |
digestive tract | 1.08e-18 | 145 |
primitive gut | 1.08e-18 | 145 |
intestine | 5.38e-17 | 17 |
endoderm-derived structure | 3.93e-16 | 160 |
endoderm | 3.93e-16 | 160 |
presumptive endoderm | 3.93e-16 | 160 |
gastrointestinal system | 5.35e-16 | 25 |
digestive tract diverticulum | 7.50e-13 | 23 |
gut epithelium | 7.75e-12 | 54 |
epithelium of foregut-midgut junction | 8.01e-12 | 25 |
anatomical boundary | 8.01e-12 | 25 |
hepatobiliary system | 8.01e-12 | 25 |
foregut-midgut junction | 8.01e-12 | 25 |
septum transversum | 8.01e-12 | 25 |
small intestine | 8.98e-12 | 4 |
sac | 4.00e-11 | 26 |
hepatic diverticulum | 4.62e-11 | 22 |
liver primordium | 4.62e-11 | 22 |
organ system subdivision | 1.47e-10 | 223 |
foregut | 5.11e-10 | 87 |
endo-epithelium | 1.09e-09 | 82 |
epithelial sac | 1.60e-09 | 25 |
colon | 7.34e-09 | 9 |
adult organism | 3.29e-08 | 114 |
trunk region element | 4.68e-08 | 101 |
liver | 5.30e-08 | 19 |
digestive gland | 5.30e-08 | 19 |
liver bud | 5.30e-08 | 19 |
endocrine system | 5.62e-08 | 45 |
large intestine | 3.47e-07 | 11 |
hindgut | 4.19e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
tubular adenocarcinoma | 3.94e-08 | 2 |