FFCP PHASE1:Hg19::chr7:121156367..121156370,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr7:121156367..121156370,- | |||
|id=chr7:121156367..121156370,- | |||
|ontology_enrichment_celltype=CL:0002541!7.62e-17!3;CL:0000362!7.91e-17!8;CL:0002327!1.66e-12!4;CL:0000317!2.70e-12!2;CL:1000448!2.70e-12!2;CL:0002308!2.70e-12!2;CL:0002140!2.70e-12!2;CL:0002159!2.91e-10!13;CL:0000312!4.07e-10!5;CL:0000240!1.66e-08!6;CL:0000311!1.66e-08!6;CL:0000079!1.66e-08!6;CL:0000237!1.66e-08!6;CL:0000036!1.66e-08!6;CL:0000357!1.66e-08!6;CL:0000114!1.66e-08!6;CL:0000239!3.08e-08!3;CL:1000615!3.08e-08!3;CL:0002306!3.08e-08!3;CL:1001319!4.85e-07!1;CL:1000600!4.85e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0000317;8.49e-50;2!CL:1000448;8.49e-50;2!CL:0002308;8.49e-50;2!CL:0002140;8.49e-50;2!CL:1001319;7.62e-26;1!CL:1000600;7.62e-26;1!CL:0000622;1.21e-20;5!CL:0000154;2.19e-17;6!CL:0002535;6.85e-14;2!CL:0000150;6.16e-12;9!CL:0000362;6.16e-12;9!CL:0002541;1.53e-09;3!CL:0002159;5.18e-08;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0000317,1.09e-49,2;CL:1000448,1.09e-49,2;CL:0002308,1.09e-49,2;CL:0002140,1.09e-49,2;CL:1001319,4.61e-26,1;CL:1000600,4.61e-26,1;CL:0000622,1.34e-20,5;CL:0000154,2.38e-17,6;CL:0002535,6.43e-14,2;CL:0000150,6.51e-12,9;CL:0000362,6.51e-12,9;CL:0002541,1.81e-09,3;CL:0002159,5.36e-08,14 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1749;3.97e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,3.90e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0000476!7.62e-17!3;UBERON:0000920!7.62e-17!3;UBERON:0005631!3.34e-13!14;UBERON:0000158!3.34e-13!14;UBERON:0001911!1.66e-12!4;UBERON:0005333!1.66e-12!4;UBERON:0008425!1.66e-12!4;UBERON:0005311!1.66e-12!4;UBERON:0003124!2.52e-12!7;UBERON:0002419!2.70e-12!2;UBERON:0007771!2.70e-12!2;UBERON:0003297!2.70e-12!2;UBERON:0001821!2.70e-12!2;UBERON:0003487!2.70e-12!2;UBERON:0001820!2.70e-12!2;UBERON:0005089!2.70e-12!2;UBERON:0005088!2.70e-12!2;UBERON:0001003!1.64e-09!14;UBERON:0007376!1.64e-09!14;UBERON:0007383!1.64e-09!14;UBERON:0006853!3.08e-08!3;UBERON:0007685!3.08e-08!3;UBERON:0004134!3.08e-08!3;UBERON:0000478!1.86e-07!24;UBERON:0004645!4.85e-07!1;UBERON:0001256!4.85e-07!1;UBERON:0001259!4.85e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002419;8.49e-50;2!UBERON:0007771;8.49e-50;2!UBERON:0003297;8.49e-50;2!UBERON:0001821;8.49e-50;2!UBERON:0003487;8.49e-50;2!UBERON:0001820;8.49e-50;2!UBERON:0004645;7.62e-26;1!UBERON:0001256;7.62e-26;1!UBERON:0001259;7.62e-26;1!UBERON:0006955;6.85e-14;2!UBERON:0004801;6.85e-14;2!UBERON:0001255;1.21e-13;2!UBERON:0001556;1.21e-13;2!UBERON:0003124;1.53e-09;3!UBERON:0000920;1.53e-09;3!UBERON:0001003;1.54e-07;15!UBERON:0007376;1.54e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002419,1.09e-49,2;UBERON:0007771,1.09e-49,2;UBERON:0003297,1.09e-49,2;UBERON:0001821,1.09e-49,2;UBERON:0003487,1.09e-49,2;UBERON:0001820,1.09e-49,2;UBERON:0005089,1.09e-49,2;UBERON:0005088,1.09e-49,2;UBERON:0004645,4.61e-26,1;UBERON:0001256,4.61e-26,1;UBERON:0001259,4.61e-26,1;UBERON:0006955,6.43e-14,2;UBERON:0004801,6.43e-14,2;UBERON:0001255,9.40e-14,2;UBERON:0001556,9.40e-14,2;UBERON:0000920,1.81e-09,3;UBERON:0001003,1.59e-07,15;UBERON:0007376,1.59e-07,15;UBERON:0007383,1.59e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439001141634502,0,0.201057944823262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447792613514241,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0.671624264166535,0,0,0,0,0,0,0,0,1.14853107599234,1.30012049207304,0,0,0,0,0,0,0,0,0,0.165284915360978,0,1.53135254993501,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0.47748896947538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0.183195186803725,1.06606955203727,0,0,0,0,0,0,3.41556718903533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.5694274697965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0.328370082997356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11736923029415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54666210360852,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr7:121156367..121156370,- | |||
}} |
Revision as of 19:03, 22 January 2014
Short description: | p@chr7:121156367..121156370, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:121156367..121156370, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sebum secreting cell | 1.09e-49 | 2 |
epithelial cell of sweat gland | 1.09e-49 | 2 |
epithelial cell of skin gland | 1.09e-49 | 2 |
acinar cell of sebaceous gland | 1.09e-49 | 2 |
bladder cell | 4.61e-26 | 1 |
lower urinary tract cell | 4.61e-26 | 1 |
acinar cell | 1.34e-20 | 5 |
protein secreting cell | 2.38e-17 | 6 |
epithelial cell of cervix | 6.43e-14 | 2 |
glandular epithelial cell | 6.51e-12 | 9 |
epidermal cell | 6.51e-12 | 9 |
chorionic membrane mesenchymal stem cell | 1.81e-09 | 3 |
general ecto-epithelial cell | 5.36e-08 | 14 |
Ontology term | p-value | n |
---|---|---|
skin gland | 1.09e-49 | 2 |
epidermis gland | 1.09e-49 | 2 |
gland of integumental system | 1.09e-49 | 2 |
sebaceous gland | 1.09e-49 | 2 |
skin sebaceous gland | 1.09e-49 | 2 |
sweat gland | 1.09e-49 | 2 |
sweat gland placode | 1.09e-49 | 2 |
sebaceous gland placode | 1.09e-49 | 2 |
urinary bladder urothelium | 4.61e-26 | 1 |
wall of urinary bladder | 4.61e-26 | 1 |
mucosa of urinary bladder | 4.61e-26 | 1 |
uterine epithelium | 6.43e-14 | 2 |
cervix epithelium | 6.43e-14 | 2 |
urinary bladder | 9.40e-14 | 2 |
lower urinary tract | 9.40e-14 | 2 |
egg chorion | 1.81e-09 | 3 |
skin epidermis | 1.59e-07 | 15 |
outer epithelium | 1.59e-07 | 15 |
enveloping layer of ectoderm | 1.59e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 3.90e-08 | 14 |