FFCP PHASE1:Hg19::chr7:128399025..128399043,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1281 | |||
|description=CAGE_peak_at_chr7:128399025..128399043,+ | |||
|id=chr7:128399025..128399043,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.10e-23!180;CL:0000057!1.25e-14!75;CL:0000680!1.14e-10!57;CL:0000056!1.14e-10!57;CL:0000355!1.14e-10!57;CL:0000548!2.83e-10!679;CL:0000004!2.83e-10!679;CL:0000255!2.83e-10!679;CL:0000222!5.07e-10!119;CL:0000187!1.22e-09!54;CL:0000012!1.80e-09!682;CL:0002321!1.93e-09!248;CL:0000220!2.36e-09!246;CL:0000359!6.41e-09!32;CL:0000393!6.61e-09!60;CL:0000211!6.61e-09!60;CL:0000192!7.62e-09!42;CL:0000514!7.62e-09!42;CL:0002620!1.47e-08!23;CL:0000144!2.84e-08!625;CL:0000183!8.29e-08!59;CL:0002334!3.80e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0002620;6.69e-10;23!CL:0000134;1.48e-09;55!CL:0000359;2.32e-09;32!CL:0000048;6.43e-09;58!CL:0002334;2.01e-08;12!CL:0000723;2.69e-08;61!CL:0000499;6.61e-08;28!CL:0000192;6.81e-08;43!CL:0002320;8.43e-08;188!CL:0000034;2.63e-07;69!CL:0000187;8.09e-07;55!CL:0000057;8.66e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.31e-19,76;CL:0000048,7.17e-13,427;CL:0000034,1.72e-12,441;CL:0000680,1.90e-12,58;CL:0000056,1.90e-12,58;CL:0000355,1.90e-12,58;CL:0000723,2.09e-12,433;CL:0000187,3.30e-11,55;CL:0000222,1.25e-10,121;CL:0000192,2.34e-10,43;CL:0000514,2.34e-10,43;CL:0000359,5.90e-10,32;CL:0000393,6.17e-10,61;CL:0000211,6.17e-10,61;CL:0002620,6.60e-10,23;CL:0002334,2.16e-08,12;CL:0000499,3.71e-08,28;CL:0002321,3.92e-08,250 | |||
|ontology_enrichment_development_v019=CL:0000514;6.81e-08;43 | |||
|ontology_enrichment_disease=DOID:2394!7.05e-09!14;DOID:193!8.64e-07!29 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.59e-10;14!DOID:120;1.87e-07;27!DOID:193;2.26e-07;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.66e-10,14;DOID:120,9.44e-08,27;DOID:193,1.17e-07,29 | |||
|ontology_enrichment_uberon=UBERON:0000914!4.47e-10!83;UBERON:0002329!4.47e-10!83;UBERON:0003077!4.47e-10!83;UBERON:0003059!4.47e-10!83;UBERON:0007282!4.47e-10!83;UBERON:0009618!4.47e-10!83;UBERON:0007285!4.47e-10!83;UBERON:0004290!8.44e-10!70;UBERON:0002199!1.45e-09!45;UBERON:0002416!1.45e-09!45;UBERON:0001134!2.07e-09!61;UBERON:0002036!2.07e-09!61;UBERON:0003082!2.07e-09!61;UBERON:0002385!3.37e-09!63;UBERON:0001015!3.37e-09!63;UBERON:0000383!3.37e-09!63;UBERON:0003102!6.19e-09!95;UBERON:0000486!7.22e-09!82;UBERON:0001637!2.73e-08!42;UBERON:0003509!2.73e-08!42;UBERON:0004572!2.73e-08!42;UBERON:0002097!2.94e-08!40;UBERON:0005256!6.02e-08!143;UBERON:0004872!6.40e-08!84;UBERON:0001981!1.60e-07!60;UBERON:0007500!1.60e-07!60;UBERON:0004537!1.60e-07!60;UBERON:0006965!1.60e-07!60;UBERON:0004573!4.53e-07!33;UBERON:0004571!4.53e-07!33;UBERON:0000490!4.86e-07!138;UBERON:0002049!5.57e-07!79;UBERON:0007798!5.57e-07!79;UBERON:0002100!6.46e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0002384;1.59e-07;198!UBERON:0004457;7.41e-07;9!UBERON:0000042;7.41e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002329,3.39e-11,71;UBERON:0003059,3.39e-11,71;UBERON:0007282,3.39e-11,71;UBERON:0004290,3.39e-11,71;UBERON:0009618,3.39e-11,71;UBERON:0007524,3.65e-11,73;UBERON:0003077,8.64e-11,72;UBERON:0007285,8.64e-11,72;UBERON:0001134,1.45e-10,62;UBERON:0002036,1.45e-10,62;UBERON:0003082,1.45e-10,62;UBERON:0002385,2.14e-10,64;UBERON:0001015,2.14e-10,64;UBERON:0000383,2.14e-10,64;UBERON:0002199,2.63e-10,46;UBERON:0002416,2.63e-10,46;UBERON:0000486,1.24e-09,83;UBERON:0005256,2.18e-09,122;UBERON:0007503,2.87e-09,78;UBERON:0003102,3.23e-09,99;UBERON:0002097,9.47e-09,41;UBERON:0001637,9.49e-09,42;UBERON:0003509,9.49e-09,42;UBERON:0004572,9.49e-09,42;UBERON:0004872,3.44e-08,83;UBERON:0004573,1.16e-07,33;UBERON:0004571,1.16e-07,33;UBERON:0000490,2.18e-07,148;UBERON:0007500,5.64e-07,59;UBERON:0001981,5.64e-07,59;UBERON:0004537,5.64e-07,59;UBERON:0006965,5.64e-07,59 | |||
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| |||
|short_description=p@chr7:128399025..128399043,+ | |||
}} |
Revision as of 19:10, 22 January 2014
Short description: | p@chr7:128399025..128399043, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | No |
Description: | CAGE_peak_at_chr7:128399025..128399043, + |
Coexpression cluster: | C1281_Smooth_Fibroblast_Adipocyte_Olfactory_leiomyoma_Preadipocyte_tenocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.31e-19 | 76 |
multi fate stem cell | 7.17e-13 | 427 |
stem cell | 1.72e-12 | 441 |
muscle precursor cell | 1.90e-12 | 58 |
myoblast | 1.90e-12 | 58 |
multi-potent skeletal muscle stem cell | 1.90e-12 | 58 |
somatic stem cell | 2.09e-12 | 433 |
muscle cell | 3.30e-11 | 55 |
mesodermal cell | 1.25e-10 | 121 |
smooth muscle cell | 2.34e-10 | 43 |
smooth muscle myoblast | 2.34e-10 | 43 |
vascular associated smooth muscle cell | 5.90e-10 | 32 |
electrically responsive cell | 6.17e-10 | 61 |
electrically active cell | 6.17e-10 | 61 |
skin fibroblast | 6.60e-10 | 23 |
preadipocyte | 2.16e-08 | 12 |
stromal cell | 3.71e-08 | 28 |
embryonic cell | 3.92e-08 | 250 |
Ontology term | p-value | n |
---|---|---|
somite | 3.39e-11 | 71 |
presomitic mesoderm | 3.39e-11 | 71 |
presumptive segmental plate | 3.39e-11 | 71 |
dermomyotome | 3.39e-11 | 71 |
trunk paraxial mesoderm | 3.39e-11 | 71 |
dense mesenchyme tissue | 3.65e-11 | 73 |
paraxial mesoderm | 8.64e-11 | 72 |
presumptive paraxial mesoderm | 8.64e-11 | 72 |
skeletal muscle tissue | 1.45e-10 | 62 |
striated muscle tissue | 1.45e-10 | 62 |
myotome | 1.45e-10 | 62 |
muscle tissue | 2.14e-10 | 64 |
musculature | 2.14e-10 | 64 |
musculature of body | 2.14e-10 | 64 |
integument | 2.63e-10 | 46 |
integumental system | 2.63e-10 | 46 |
multilaminar epithelium | 1.24e-09 | 83 |
trunk mesenchyme | 2.18e-09 | 122 |
epithelial vesicle | 2.87e-09 | 78 |
surface structure | 3.23e-09 | 99 |
skin of body | 9.47e-09 | 41 |
artery | 9.49e-09 | 42 |
arterial blood vessel | 9.49e-09 | 42 |
arterial system | 9.49e-09 | 42 |
splanchnic layer of lateral plate mesoderm | 3.44e-08 | 83 |
systemic artery | 1.16e-07 | 33 |
systemic arterial system | 1.16e-07 | 33 |
unilaminar epithelium | 2.18e-07 | 148 |
epithelial tube open at both ends | 5.64e-07 | 59 |
blood vessel | 5.64e-07 | 59 |
blood vasculature | 5.64e-07 | 59 |
vascular cord | 5.64e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.66e-10 | 14 |
female reproductive organ cancer | 9.44e-08 | 27 |
reproductive organ cancer | 1.17e-07 | 29 |