FFCP PHASE1:Hg19::chr9:113342185..113342214,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79987 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15985 | |||
|TSSclassifier=strong | |||
|UniProt=B3KQM1,Q4LDE5 | |||
|association_with_transcript=-25bp_to_ENST00000374461,ENST00000401783,NM_153366,uc004beu.2,uc010mtz.2,uc010mua.1_5end | |||
|coexpression_cluster_id=C2935 | |||
|description=CAGE_peak_3_at_SVEP1_5end | |||
|id=chr9:113342185..113342214,- | |||
|ontology_enrichment_celltype=CL:0000057!5.70e-20!75;CL:0000055!1.10e-16!180;CL:0000136!5.28e-09!15;CL:0002620!5.78e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0000136;1.67e-12;13!CL:0002620;1.81e-09;23!CL:0000057;1.25e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.59e-19,76;CL:0000136,5.50e-12,15;CL:0002620,2.72e-09,23 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!3.82e-12!365;UBERON:0007023!8.09e-10!115;UBERON:0003102!1.00e-09!95;UBERON:0000481!3.53e-09!347;UBERON:0000914!1.73e-08!83;UBERON:0002329!1.73e-08!83;UBERON:0003077!1.73e-08!83;UBERON:0003059!1.73e-08!83;UBERON:0007282!1.73e-08!83;UBERON:0009618!1.73e-08!83;UBERON:0007285!1.73e-08!83;UBERON:0000468!1.56e-07!659;UBERON:0004457!3.90e-07!12;UBERON:0000042!3.90e-07!12;UBERON:0002385!6.63e-07!63;UBERON:0001015!6.63e-07!63;UBERON:0000383!6.63e-07!63 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;3.23e-07;9!UBERON:0000042;3.23e-07;9!UBERON:0002384;4.29e-07;198 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,3.12e-11,99;UBERON:0002199,2.07e-08,46;UBERON:0002416,2.07e-08,46;UBERON:0002097,3.62e-08,41;UBERON:0004457,1.30e-07,12;UBERON:0000042,1.30e-07,12 | |||
|phase1_expression=6.35874327446948,12.846031433459,9.58489947852604,10.007329835313,5.81049422755474,4.36169262050184,0,1.26343974685366,13.0592814099919,0,0.697801167972428,0,0,3.96052329472149,8.28493439319789,0,0,0.730310090387373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,1.02290049474824,2.1686349143074,3.50936537445123,3.91085601194224,0,0,0,0,0.087834785693126,0.982343066232845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,1.77282716330412,4.10468460520978,12.9076479336966,1.06400514659507,1.12135520028461,1.06748995729705,0,0.933633106199299,0.67355336034844,0.490385709340376,2.57307626996383,2.88087962239999,1.40592859100278,1.24864030732128,0,0.597794722207204,0,0,0,3.0623125688234,0.61417158655884,2.89312187292143,9.50402285825643,6.18167323196392,3.64064544775211,1.43723628363248,0.841680569770331,0.875829639103749,1.10825646193673,0.877955241761676,1.5324389789951,7.06118876861005,0,1.25572744982203,10.4643120521098,10.172731255659,1.20036438433761,7.31672957592916,3.60696756063881,2.79175284497385,1.68776332241266,1.55899208257918,5.3011092591264,16.6610316542562,16.0029596250624,1.06502877754984,0.10075209822764,1.01736355386293,0,0,0,0,0,0,0.10366105501537,0,0,3.12899064659632,1.92972281457866,0,6.50115099244771,6.49691533502627,0.473227200159376,0.337169380156203,0.241011029883482,0.330881918197182,0,0.237270619111097,0.404493924480493,0,0.38474715694639,0,0,0,1.47008711385542,0,0,0,0,0,0.343135620597051,0,0,0,0,0.977424915930974,1.03993478527958,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0.179117045405697,0,0,0,0,0.207328115540772,0,0.50496973370552,0.063497894292169,0,0,3.4214489204541,0,0,0,0.224262168690721,0.43596006883328,0.07333828582095,0.387815147273333,46.4953379607447,0,1.06375246633948,1.04007436911366,0,0,0.266422179016099,4.00338382242813,3.25572963234866,0.823240336780769,0,8.17401482107855,0,1.80863626235752,0,1.89948683245908,0,0,0,0,0,0,0.434343920002738,0.410952645100767,0.895304816199478,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,8.46571292862065,0.500170521059677,2.71265023699736,0.415941723061614,2.14114786556594,6.78120384645919,7.02848489956279,3.00946099727719,6.82222512167955,4.1389228517002,0,0.184369168541703,8.6014778323402,0,0,0,0,0,0,0,0,1.98486246255021,8.90079445070762,1.96462066103151,4.99742682097234,4.09365799253363,0.965123526861645,1.48418066444991,0.308419387605311,0,0.246381468041427,0,0.116210378459959,0,0,0,1.7222167224691,1.82091168006717,10.7522020266728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,26.8937040400555,0.0915694648183434,0.082509499920588,0,0,4.82051789532479,0.193341436584244,1.23238893691716,1.07452572308291,0.551346289938122,8.27135885485707,7.1058180017972,0.596586391912706,0.979352392114111,0,0,0,0.10115778085555,0,3.46293581513704,0,0.308033580176089,0,0.869932992075073,0.37064843820784,0,0.744316738719335,0,5.3376454298671,2.303080121802,5.13526785640705,0.95460974377781,0,19.0664805038314,11.2560182191782,8.01124335950668,0,0,0.421258456238981,4.8763373908959,0,0,1.50149902548784,3.39373036688911,2.26016233240486,0,0,0,0,1.31178950409327,0,0.30982349809975,0.281695602532241,0.430234056612155,0.982490410131212,0,0.354761064070598,4.85547561184627,12.8425008254362,1.89736586882858,2.44954304171488,0,0,0,27.9607088307034,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.0392279551986,0,0,0,0,0,0,0,0.140669416410513,0,0,0,1.39473591775749,1.38141957765574,0,1.73856760253663,0,1.55519793830904,0,0,0,4.53759665929895,0,0,0,0.278304294485554,0,0,0,2.89999830173917,0,0,0,0.344743373241465,0,0.173624994933292,0,0.120596438625408,1.52581736317083,3.75969483766164,1.77328571372128,0,0,0,1.76985594558733,0.227884111694002,0,0,0,0,0.732780747214898,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,4.24596309616028,1.22206028986725,0,0,0,0.202203398942031,2.40773294189637,0.234264445725339,0,0,0,0.394584402849391,2.41981432097328,0.61214552326098,3.60163503882381,0,0,0,0,0,0,0,0,0,0,0,1.57254001417827,0,0,0,0,3.87956065953678,0,2.48578814858586,0,0,0,0,0.240476460754601,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,1.23214841002794,0,0,0,1.39641200636127,0.687481272035051,0.717873024576814,0.399358000997982,0.429226048136571,0.446342914883745,0.403100834920358,1.08089965062721,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.121499113316049,0,0.551639951094387,0.524545881349981,0,0,0.383830394638891,2.85878130549347,0,0,0.542999601753713,0,0,0,0,0,0.339936274560377,0.146552233678082,0,0.129282956361551,0,1.19760786519031,0,5.9800951037909,2.98688179689365,1.65695622138878,0.992332043623902,0,0,0,4.35214242695579,1.7548292581589,3.982492497925,1.63936315354902,0,0,0,0.3755727921195,0,0.332787154610557,0.248385611765534,0,0,0,0,0,0,0.28984205722165,0,1.16856654923612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| |||
|short_description=p3@SVEP1 | |||
}} |
Revision as of 02:44, 23 January 2014
Short description: | p3@SVEP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SVEP1_5end |
Coexpression cluster: | C2935_placenta_Mesenchymal_tridermal_sacrococcigeal_Synoviocyte_Smooth_Fibroblast |
Association with transcript: | -25bp_to_ENST00000374461, ENST00000401783, NM_153366, uc004beu.2, uc010mtz.2, uc010mua.1_5end |
EntrezGene: | SVEP1 |
HGNC: | 15985 |
UniProt: | B3KQM1Q4LDE5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.59e-19 | 76 |
fat cell | 5.50e-12 | 15 |
skin fibroblast | 2.72e-09 | 23 |
Ontology term | p-value | n |
---|---|---|
surface structure | 3.12e-11 | 99 |
integument | 2.07e-08 | 46 |
integumental system | 2.07e-08 | 46 |
skin of body | 3.62e-08 | 41 |
cavity lining | 1.30e-07 | 12 |
serous membrane | 1.30e-07 | 12 |