FFCP PHASE1:Hg19::chr9:131909807..131909830,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5524 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=9308 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=113bp_to_BC010497_5end | |||
|description=CAGE_peak_17_at_PPP2R4_5end | |||
|id=chr9:131909807..131909830,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002617;1.84e-10;2!CL:0002334;7.76e-10;12!CL:0002567;1.37e-07;3!CL:0002541;1.48e-07;3!CL:0002579;1.66e-07;3!CL:0000346;3.00e-07;3!CL:1000428;3.00e-07;3!CL:0002580;3.00e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002617,3.80e-10,2;CL:0002334,5.48e-10,12;CL:0002567,8.80e-08,3;CL:0002541,1.04e-07,3;CL:0002579,1.64e-07,3;CL:0002580,2.12e-07,3;CL:0000346,2.19e-07,3;CL:1000428,2.19e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1909;1.84e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,1.09e-10,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000310;1.14e-11;10!UBERON:0001443;1.38e-10;11!UBERON:0003688;7.72e-08;6!UBERON:0002358;7.72e-08;6!UBERON:0003684;7.72e-08;6!UBERON:0001178;7.72e-08;6!UBERON:0001003;1.08e-07;15!UBERON:0007376;1.08e-07;15!UBERON:0003124;1.48e-07;3!UBERON:0000920;1.48e-07;3!UBERON:0000412;3.00e-07;3!UBERON:0001992;3.00e-07;3!UBERON:0010371;9.53e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000310,9.11e-12,10;UBERON:0001443,1.13e-10,11;UBERON:0003688,6.05e-08,6;UBERON:0002358,6.05e-08,6;UBERON:0003684,6.05e-08,6;UBERON:0001178,6.05e-08,6;UBERON:0001003,8.27e-08,15;UBERON:0007376,8.27e-08,15;UBERON:0007383,8.27e-08,15;UBERON:0000920,1.04e-07,3;UBERON:0000412,2.19e-07,3;UBERON:0001992,2.19e-07,3;UBERON:0003124,5.58e-07,7;UBERON:0004923,6.84e-07,66 | |||
|phase1_expression=1.09007027562334,1.07050261945492,1.55049844505568,0,0,0,0,0,0,0.245733936501509,0,0,0.263766978228454,0.495065411840187,0,0.672325146451775,0,0.730310090387373,0,0,0.204000691244253,0,0,0,0.376627918784408,0.0764134057479513,0,0,0,0,0,0.919421224478927,0.30120591877825,0,0,0,0,0,0,0,0.671746422719773,0.647787332037959,0,0.290796477559129,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0.272906150057846,0.449446968890169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0.285012743741249,0,0.547992461293902,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0.557052284425868,0,0,0,0.640456598628376,0.520237390239513,0.328875809207352,0.276350017785848,0,0.14828656316206,0,0,0.113309342697566,0,0.34362744548263,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0.361439152384566,1.00267582127178,0.144846518960824,0,0.486634870302636,0.0945348171640679,0.221729397462564,0.263504357079378,0.130979075497713,0,0,0.324547393654683,0.174129737299267,0.398873881556595,0,0,0,0.39752481473341,0,0,0,0,0.825354125820202,0.208994966536811,0.775250277507987,0.35576626268671,0,0,0,0,0,0.81014194788176,0.0892997282840798,0,0,0,0.949265659568129,0.183201743930407,0,0,0,0,0,0.132409180813219,0.286836620748814,0.354668382198357,0.560677600142307,0,0.24666754841716,0,0,0,0,0,0,0.312160076830321,0,0,0,0,0,0,0.122834317311768,0.103325781175765,0,0.741800787835671,0,1.43723628363248,0.168336113954066,0.125118519871964,0,0,0.30648779579902,0.751190294532984,0.113432183160021,0,0,0,0.300091096084402,0,0,0.37223371266318,0,0.292311015483596,0,0.644349290496095,0.161646056818812,0,0.10075209822764,0,2.12586938479627,0.545492241181669,0.286804595389004,0.121973706129595,0,0.232387885739037,0.414644220061482,0,0,0,1.28648187638577,1.38134921352481,0,0,0.118306800039844,0,0.241011029883482,0.220587945464788,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0.122988438543114,0.171567810298526,0.109750285408626,1.1240175325762,0,0,0,0,0,0,0,0,0,0,0.790204397959275,1.71697232418975,0,0,0.148631162288728,0,0,0.141775097242386,0,0,0,0,0.704387472105808,0.207328115540772,0.432359860250884,0.6312121671319,0.063497894292169,0.381988425558278,4.68869788840188,1.71072446022705,0.102827492703324,0,0.285826432630578,0,0,0.07333828582095,0,0,0,0.26593811658487,2.08014873822732,0.257207374262142,0,0,0,0,0,0,0,0,0.904318131178758,0,0.399891964728228,1.2162378064119,0,0,0.239624855491583,0,0,0.289562613335158,0.205476322550383,0,0,0,0,0,0.76228387266739,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0.178428988797162,0,0.117141414992713,1.20378439891088,4.5481500811197,1.03473071292505,0,0.737476674166813,0.434418072340414,0.391602314925481,1.02943027143257,0,0,0,1.5156378572313,0,0,1.98486246255021,0.153461973288062,1.12264037773229,1.28139149255701,2.04682899626681,0.804269605718038,0,0,1.42049380250502,0.164254312027618,0,0.232420756919918,0.725156697549733,4.0101294060657,0.276242966807689,0,0.182091168006717,0.524497659837696,0.451199612907412,0.15403067420883,0,0,0.316654886678627,0,0,0,0,0,1.00337954770971,0,0.831076008928724,0.223874754722178,0.219259876645935,0,0,1.31205858279882,0,0.515205058238611,0.0915694648183434,0,0,0,0,0.773365746336976,0,0.460511024178389,0.137836572484531,0.214840489736547,0,0,0.178064071293475,0.495854746082934,0.192190067365106,0,0,0.929691098594572,0,0.6970372701606,0,0,0,0.55597265731176,0.143124886741991,0.744316738719335,0,0.38126038784765,0,0,0,0.78494864019923,0,0.54907405947211,0.235624804691373,0.202182481573316,0,0.842516912477962,0,0,0,0.409499734223957,0.848432591722276,0,0.551365343546124,0,0,0.578775534266688,0.655894752046633,0,0.30982349809975,0.563391205064483,0,0,0,0,0.422215270595328,0,0.379473173765715,0,0.192444225451024,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0.0711418433484141,0,0,0,0,0.324621940274555,0.280797178113459,0,0.313359791546046,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0.557216921387392,0,0,0.890894042497916,0,0,0.281338832821026,1.11308705022906,0,0.63337622438398,0,0,0,0,0,0,0,0,0,0.493217028184668,0,0,0,0.74214478529481,0,0,0,0,0,0,0.472775363535873,0,0.291604613383254,0.173624994933292,0,0,0,0,0.295547618953547,0.219385397153973,0.10893846351899,0,0.461701551022782,0.341826167541004,0,0.359030577639089,0.325942115766024,0,3.20591576906518,1.5991043280559,0,0,0,0.225595660617181,0,0,0,0,0,0,0,0,0,0.707660516026713,0.611030144933625,0,0.123563938946503,0,0.067401132980677,0,0.468528891450678,0,0,0.728341138602278,0,0,0,0.063186579628488,0.60129367765797,0.518440956986236,0,0,0,0,0,0.138674673013139,0,0,0,0.698906672968121,0,0.0967563312890851,0.0730893170861856,0.0821154570532092,0.678923115418936,0.264768380074501,0,0,0,0,0,0,0.426905989478705,0.19980960958213,0,0,0,0,0,0,0,0.209205692624666,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0.429226048136571,0.446342914883745,0.0671834724867263,0,0,0.0787831823072236,0,0,0,0,0,0.136203406111576,0.964518890790115,1.10031549277787,1.24632101408756,0.2249738915515,0,0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| |||
|short_description=p17@PPP2R4 | |||
}} |
Revision as of 03:38, 23 January 2014
Short description: | p17@PPP2R4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_PPP2R4_5end |
Coexpression cluster: | NA |
Association with transcript: | 113bp_to_BC010497_5end |
EntrezGene: | PPP2R4 |
HGNC: | 9308 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of breast | 3.80e-10 | 2 |
preadipocyte | 5.48e-10 | 12 |
light melanocyte | 8.80e-08 | 3 |
chorionic membrane mesenchymal stem cell | 1.04e-07 | 3 |
omentum preadipocyte | 1.64e-07 | 3 |
preadipocyte of the breast | 2.12e-07 | 3 |
hair follicle dermal papilla cell | 2.19e-07 | 3 |
stem cell of epidermis | 2.19e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
breast | 9.11e-12 | 10 |
chest | 1.13e-10 | 11 |
omentum | 6.05e-08 | 6 |
peritoneum | 6.05e-08 | 6 |
abdominal cavity | 6.05e-08 | 6 |
visceral peritoneum | 6.05e-08 | 6 |
skin epidermis | 8.27e-08 | 15 |
outer epithelium | 8.27e-08 | 15 |
enveloping layer of ectoderm | 8.27e-08 | 15 |
egg chorion | 1.04e-07 | 3 |
dermal papilla | 2.19e-07 | 3 |
papillary layer of dermis | 2.19e-07 | 3 |
chorion | 5.58e-07 | 7 |
organ component layer | 6.84e-07 | 66 |
Ontology term | p-value | n |
---|---|---|
melanoma | 1.09e-10 | 2 |