FFCP PHASE1:Hg19::chrX:78622411..78622434,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9452 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6173 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000469541_5end | |||
|coexpression_cluster_id=C23 | |||
|description=CAGE_peak_3_at_ITM2A_5end | |||
|id=chrX:78622411..78622434,- | |||
|ontology_enrichment_celltype=CL:0000084!8.32e-27!25;CL:0000827!8.32e-27!25;CL:0000791!4.76e-24!18;CL:0000789!4.76e-24!18;CL:0002420!4.76e-24!18;CL:0002419!4.76e-24!18;CL:0000790!4.76e-24!18;CL:0000838!4.15e-19!52;CL:0000542!1.48e-18!53;CL:0000051!1.48e-18!53;CL:0000625!5.92e-17!11;CL:0000037!7.51e-14!172;CL:0000566!7.51e-14!172;CL:0000988!8.66e-13!182;CL:0000738!8.53e-12!140;CL:0002032!2.05e-11!165;CL:0000837!2.05e-11!165;CL:0000624!1.68e-10!6;CL:0002087!2.61e-09!119;CL:0002031!5.08e-09!124 | |||
|ontology_enrichment_celltype_v019=CL:0000791;4.79e-53;18!CL:0000789;4.79e-53;18!CL:0002419;4.79e-53;18!CL:0000084;3.67e-48;25!CL:0000625;3.30e-38;11!CL:0000624;1.02e-19;6!CL:0000542;6.02e-16;53!CL:0000623;1.87e-13;3!CL:0000898;2.96e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.39e-53,18;CL:0000789,2.39e-53,18;CL:0002420,2.39e-53,18;CL:0002419,2.39e-53,18;CL:0000790,2.39e-53,18;CL:0000084,2.32e-48,25;CL:0000827,2.32e-48,25;CL:0000625,1.59e-38,11;CL:0000838,8.90e-30,52;CL:0000542,4.01e-29,53;CL:0000051,4.01e-29,53;CL:0000624,1.01e-19,6;CL:0000623,1.14e-13,3;CL:0000825,1.14e-13,3;CL:0002087,2.53e-13,115;CL:0000738,6.54e-13,136;CL:0002031,2.55e-11,120;CL:0000037,1.87e-10,168;CL:0000988,1.21e-09,177;CL:0002032,4.16e-09,161;CL:0000837,4.16e-09,161;CL:0000898,3.11e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;4.79e-53;18!CL:0000051;6.02e-16;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.32e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;1.28e-09;2!UBERON:0005058;1.28e-09;2!UBERON:0009113;1.28e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.13e-10,4;UBERON:0005058,1.13e-10,4;UBERON:0009113,1.13e-10,4;UBERON:0003295,1.13e-10,4;UBERON:0005562,1.13e-10,4;UBERON:0003351,2.96e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0,0.314843125254717,0,0,0.154816123316076,0,0,0,0,0,0,0.553995408531877,0.200544447470142,0.868043482863407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0.560508562981536,0,4.91774425284583,10.2182798314783,7.81285696198135,1.83905144929746,0.977766799900771,3.31413464014313,0,0.668462741311041,5.30290633454707,3.76607620792156,2.43723477388514,0.768547918354051,1.30059347559878,3.61763390128087,3.31620021343018,5.506258628966,4.00373720537563,7.22360235842225,3.1360657141493,2.71942422474159,6.13152789763074,14.4323527102705,5.31341353240956,2.86708872891687,1.95325036156926,6.65316431113862,2.25862678616659,1.4078527226986,3.74792179657038,3.55165878066025,1.64225599384209,4.23374160771938,1.60464117470104,0.724122019413995,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0.174129737299267,0.132957960518865,0,0.571994910780128,0,0,0,0,0,0,0,0,0.258416759169329,0.35576626268671,0.66944122552934,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179117045405697,0,0,0,0.088048434013226,0.621984346622316,0.432359860250884,1.38866676769018,0,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0,0,0,0,0,0,0,0,0,0,0,1.97030760201927,2.15627574859517,1.66845947163673,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03384013061444,1.2942852049117,0.533637789017222,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476463550915578,0.822724546172388,0,0.540031437238115,0,0,0,0,0,0,1.35169502361987,0.159426272728822,0,0.383010740264733,0.211673582723883,0.324621940274555,0,0,0,0,0.338583555603207,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0.66614393599564,1.4098700508785,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0.583209226766509,0,0,0,0,0,0.295547618953547,0.219385397153973,0,0,0.153900517007594,0,0,0,0,0,0,0,7.15353087370155,0.627921025580099,0.166211681900156,0.225595660617181,0,0,0.189753732724185,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0,1.20990716048664,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0.262887354279314,0,0.229160424011684,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0.160753148465019,0.137539436597234,0,0,0,0.121499113316049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0.213574825135389,0.943225830597996,0,1.9846640872478,0.197611631897944,0,0,0,0.2506898940227,0,0,0,0,0.122026264901963,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0.59996218756479,0.426766918776564,0,0,0,0,0,0,0,1.25812753484717,0,0.509197589862076,1.06287460050841,1.36329340684902,0,0,0,0,0,0,0.128458450192919,0,0.159633859057151,0,0,0.345786262321089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270150338473579,0.781078098613847,0,0.126831620387814,0,0,0,0.351742488719241,0,0,0,0,0,0.0887023701626388,0.460935950223117,0,0.135939465953663,0.131545547125698,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.0939839179798536,0.257831551894309,0,0,0,0,0.730336388246517,0,0,0,0.271965960763659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0.103432995861895,0.213233981900981,0.23806443146374,2.00225620491619,1.67601728598816,0,0,0,0,0.342233301085281,0.26940821205835,0,0,0,0,0,0,0,0.122241444182866,0,0,0.201273793591026,0.320568492303233 | |||
|short_description=p3@ITM2A | |||
}} |
Revision as of 06:11, 23 January 2014
Short description: | p3@ITM2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ITM2A_5end |
Coexpression cluster: | C23_CD4_CD8_Natural_Peripheral_Basophils_CD19_CD14 |
Association with transcript: | 0bp_to_ENST00000469541_5end |
EntrezGene: | ITM2A |
HGNC: | 6173 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 2.39e-53 | 18 |
alpha-beta T cell | 2.39e-53 | 18 |
immature T cell | 2.39e-53 | 18 |
mature T cell | 2.39e-53 | 18 |
immature alpha-beta T cell | 2.39e-53 | 18 |
T cell | 2.32e-48 | 25 |
pro-T cell | 2.32e-48 | 25 |
CD8-positive, alpha-beta T cell | 1.59e-38 | 11 |
lymphoid lineage restricted progenitor cell | 8.90e-30 | 52 |
lymphocyte | 4.01e-29 | 53 |
common lymphoid progenitor | 4.01e-29 | 53 |
CD4-positive, alpha-beta T cell | 1.01e-19 | 6 |
natural killer cell | 1.14e-13 | 3 |
pro-NK cell | 1.14e-13 | 3 |
nongranular leukocyte | 2.53e-13 | 115 |
leukocyte | 6.54e-13 | 136 |
hematopoietic lineage restricted progenitor cell | 2.55e-11 | 120 |
hematopoietic stem cell | 1.87e-10 | 168 |
hematopoietic cell | 1.21e-09 | 177 |
hematopoietic oligopotent progenitor cell | 4.16e-09 | 161 |
hematopoietic multipotent progenitor cell | 4.16e-09 | 161 |
naive T cell | 3.11e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
thymus | 1.13e-10 | 4 |
hemolymphoid system gland | 1.13e-10 | 4 |
thymic region | 1.13e-10 | 4 |
pharyngeal gland | 1.13e-10 | 4 |
thymus primordium | 1.13e-10 | 4 |
pharyngeal epithelium | 2.96e-07 | 6 |