UBERON:0006555: Difference between revisions
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{{UBERON | {{UBERON | ||
| | |alt_id= | ||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
| | |def= | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=UBERON:0006555 | |||
|is_a=UBERON:0000025 ;;UBERON:0006554 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|name=excretory tube | |||
|namespace= | |||
|obo_creation_date= | |||
|part_of=UBERON:0001008 | |part_of=UBERON:0001008 | ||
|preceded_by= | |||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
| | |subset= | ||
| | |synonym= | ||
|union_of= | |||
|xref= | |||
}} | }} | ||
Revision as of 11:40, 12 September 2014
| Name: | excretory tube |
|---|
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0000025(tube),UBERON:0006554(urinary system structure) |
|---|---|
| part_of: | UBERON:0001008(renal system) |
Children
| is a: | UBERON:0000056 (ureter),UBERON:0000083 (mesonephric tubule),UBERON:0006553 (renal duct),UBERON:0007684 (uriniferous tubule),UBERON:0009773 (renal tubule),UBERON:0010532 (primitive nephron) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10290-104G2
- 10318-105A3
- 10346-105D4
- 11514-119H2 (Renal Glomerular Endothelial Cells, donor1)
- 11515-119H3 (Renal Proximal Tubular Epithelial Cell, donor1)
- 11516-119H4 (Renal Cortical Epithelial Cells, donor1)
- 11517-119H5 (Renal Epithelial Cells, donor1)
- 11518-119H6 (Renal Mesangial Cells, donor1)
- 11590-120G6 (Alveolar Epithelial Cells, donor2)
- 11594-120H1 (Renal Glomerular Endothelial Cells, donor2)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0006555 (excretory tube), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 7.12e-98 | FFCP PHASE2:Hg19::chr2:693380..693398,+#_e3592ada75472de93964bc8b01718aa4 | p@chr2:693380..693398, + |
| 7.12e-98 | FFCP PHASE1:Hg19::chr2:693380..693398,+#_e3592ada75472de93964bc8b01718aa4 | p@chr2:693380..693398, + |
| 1.58e-86 | FFCP PHASE2:Mm9::chr18:44264202..44264213,+#_3b2bf352079d1a022ce1c9522b9b5110 | p4@Spink12 |
| 1.58e-86 | FFCP PHASE1:Mm9::chr18:44264202..44264213,+#_3b2bf352079d1a022ce1c9522b9b5110 | p4@Spink12 |
| 2.81e-78 | FFCP PHASE2:Hg19::chr15:66420804..66420837,-#_625bd56ad734e385381b843cd2fe98ca | p4@MEGF11 |
| 2.81e-78 | FFCP PHASE1:Hg19::chr15:66420804..66420837,-#_625bd56ad734e385381b843cd2fe98ca | p4@MEGF11 |
| 1.04e-71 | FFCP PHASE2:Hg19::chr10:102495147..102495159,+#_15c0338b883399fdbd8f506c24c999cd | p4@PAX2 |
| 1.04e-71 | FFCP PHASE1:Hg19::chr10:102495147..102495159,+#_15c0338b883399fdbd8f506c24c999cd | p4@PAX2 |
| 1.28e-69 | FFCP PHASE1:Hg19::chr7:27219833..27219845,-#_5ac4ac0a461e2936ec059f1e2e5ba1e5 | p7@HOXA10 |
| 1.28e-69 | FFCP PHASE2:Hg19::chr7:27219833..27219845,-#_5ac4ac0a461e2936ec059f1e2e5ba1e5 | p7@HOXA10 |
| 4.01e-67 | FFCP PHASE2:Hg19::chr10:102505954..102505973,+#_e980f55b99064a2466be6bc8d5320394 | p3@PAX2 |
| 4.01e-67 | FFCP PHASE1:Hg19::chr10:102505954..102505973,+#_e980f55b99064a2466be6bc8d5320394 | p3@PAX2 |
| 1.1e-61 | FFCP PHASE1:Hg19::chr1:1100457..1100470,+#_87bca8656149280ac9f661fa29378448 | p@chr1:1100457..1100470, + |
| 1.1e-61 | FFCP PHASE2:Hg19::chr1:1100457..1100470,+#_87bca8656149280ac9f661fa29378448 | p@chr1:1100457..1100470, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr5:110773718..110773729,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr5:110773718..110773729, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr11:116901496..116901514,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p1@ENSMUST00000150628, p1@ENSMUST00000152401, p1@uc007mmw.1 |
| 3.28e-58 | FFCP PHASE1:Mm9::chr1:87936238..87936249,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr1:87936238..87936249, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr5:100634942..100634968,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr5:100634942..100634968, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr2:152302813..152302821,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p3@Defb20 |
| 3.28e-58 | FFCP PHASE2:Mm9::chrX:20422498..20422506,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chrX:20422498..20422506, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr11:53937918..53937922,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p7@P4ha2 |
| 3.28e-58 | FFCP PHASE2:Mm9::chrX:12571679..12571688,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chrX:12571679..12571688, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr13:21385729..21385768,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr13:21385729..21385768, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr15:54678902..54678911,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr15:54678902..54678911, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr5:31379437..31379448,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr5:31379437..31379448, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr18:62816857..62816866,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p7@Spink10 |
| 3.28e-58 | FFCP PHASE1:Mm9::chr7:109379339..109379349,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p15@Pgap2 |
| 3.28e-58 | FFCP PHASE1:Mm9::chr5:35930667..35930691,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr5:35930667..35930691, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr13:24270118..24270122,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr13:24270118..24270122, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr14:69116075..69116107,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr14:69116075..69116107, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr3:107731917..107731926,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr3:107731917..107731926, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr3:103650817..103650825,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr3:103650817..103650825, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr11:101958844..101958851,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr11:101958844..101958851, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr1:155738967..155738974,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr1:155738967..155738974, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr2:25348986..25348999,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p4@Lcn12 |
| 3.28e-58 | FFCP PHASE1:Mm9::chr13:24270118..24270122,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr13:24270118..24270122, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr11:59845376..59845393,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr11:59845376..59845393, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr10:85390145..85390153,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr10:85390145..85390153, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chrX:130496286..130496293,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chrX:130496286..130496293, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr5:110773795..110773801,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr5:110773795..110773801, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr14:69116075..69116107,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr14:69116075..69116107, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr11:17224952..17224968,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr11:17224952..17224968, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr19:17591760..17591765,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr19:17591760..17591765, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr13:21379430..21379437,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr13:21379430..21379437, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr7:151927980..151927988,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr7:151927980..151927988, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr12:103896072..103896081,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr12:103896072..103896081, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr14:51627586..51627595,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p4@Rnase10 |
| 3.28e-58 | FFCP PHASE2:Mm9::chr8:19141429..19141440,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr8:19141429..19141440, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr15:75304900..75304907,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr15:75304900..75304907, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr9:26785438..26785446,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p3@Acad8 |
| 3.28e-58 | FFCP PHASE1:Mm9::chrX:20219008..20219045,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chrX:20219008..20219045, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr2:164464249..164464258,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr2:164464249..164464258, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr2:158083961..158083968,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p4@Bpi |
| 3.28e-58 | FFCP PHASE1:Mm9::chr5:31379454..31379466,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr5:31379454..31379466, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr15:75304916..75304925,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr15:75304916..75304925, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr1:90155966..90155989,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr1:90155966..90155989, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr10:91753336..91753348,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr10:91753336..91753348, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr13:21383212..21383225,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr13:21383212..21383225, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr1:90156002..90156013,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr1:90156002..90156013, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr16:23308115..23308126,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr16:23308115..23308126, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr1:155698178..155698191,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr1:155698178..155698191, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr18:44261480..44261486,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr18:44261480..44261486, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr9:26719400..26719404,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr9:26719400..26719404, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr9:35657557..35657582,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p2@Gm3428 |
| 3.28e-58 | FFCP PHASE2:Mm9::chr14:52542831..52542836,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p4@Rnase13 |
| 3.28e-58 | FFCP PHASE1:Mm9::chr2:164464249..164464258,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr2:164464249..164464258, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr15:54678915..54678922,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr15:54678915..54678922, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr1:89597834..89597840,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr1:89597834..89597840, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr18:62775330..62775347,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr18:62775330..62775347, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr1:192816674..192816714,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr1:192816674..192816714, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr2:167480413..167480463,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr2:167480413..167480463, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr11:101958887..101958896,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr11:101958887..101958896, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr16:22504758..22504766,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr16:22504758..22504766, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr5:35930706..35930717,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr5:35930706..35930717, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr1:89597818..89597827,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr1:89597818..89597827, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chrX:50280126..50280140,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chrX:50280126..50280140, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr8:22061721..22061728,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p2@Gm6040, p2@LOC100503992 |
| 3.28e-58 | FFCP PHASE2:Mm9::chr16:23308182..23308185,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr16:23308182..23308185, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr1:87922778..87922788,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr1:87922778..87922788, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr7:65995799..65995810,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr7:65995799..65995810, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr11:98567868..98567884,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p5@Med24 |
| 3.28e-58 | FFCP PHASE2:Mm9::chrX:130496166..130496188,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chrX:130496166..130496188, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr14:63611214..63611229,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr14:63611214..63611229, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr5:31379845..31379855,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr5:31379845..31379855, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chrX:75798132..75798152,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chrX:75798132..75798152, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr11:17224952..17224968,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr11:17224952..17224968, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr4:137325863..137325870,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p15@Alpl |
| 3.28e-58 | FFCP PHASE1:Mm9::chr9:70761885..70761895,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr9:70761885..70761895, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr5:75559819..75559830,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr5:75559819..75559830, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr1:87922778..87922788,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr1:87922778..87922788, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr10:116399500..116399516,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr10:116399500..116399516, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr13:21378766..21378781,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr13:21378766..21378781, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr11:101959159..101959163,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr11:101959159..101959163, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr8:19141447..19141469,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr8:19141447..19141469, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr2:152302739..152302742,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p5@Defb20 |
| 3.28e-58 | FFCP PHASE1:Mm9::chr12:110131571..110131579,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p15@Wars |
| 3.28e-58 | FFCP PHASE2:Mm9::chr11:53955299..53955306,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr11:53955299..53955306, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr6:147624258..147624285,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr6:147624258..147624285, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr16:43230846..43230884,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr16:43230846..43230884, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr11:34107586..34107593,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr11:34107586..34107593, - |
