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{{UBERON
{{UBERON
|id=UBERON:0006555
|alt_id=
|name=excretory tube
|namespace=
|def=
|xref=
|is_a=UBERON:0000025;;UBERON:0006554
|synonym=
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def=
|subset=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0006555
|is_a=UBERON:0000025 ;;UBERON:0006554
|is_obsolete=
|located_in=
|located_in=
|name=excretory tube
|namespace=
|obo_creation_date=
|part_of=UBERON:0001008
|part_of=UBERON:0001008
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym=
|union_of=
|xref=
}}
}}

Revision as of 11:40, 12 September 2014

Name:excretory tube

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0000025(tube),UBERON:0006554(urinary system structure)
part_of:UBERON:0001008(renal system)



Children

is a:UBERON:0000056 (ureter),UBERON:0000083 (mesonephric tubule),UBERON:0006553 (renal duct),UBERON:0007684 (uriniferous tubule),UBERON:0009773 (renal tubule),UBERON:0010532 (primitive nephron)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0006555 (excretory tube), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data


P-valueFFCPShort description
7.12e-98FFCP PHASE1:Hg19::chr2:693380..693398,+#_e3592ada75472de93964bc8b01718aa4p@chr2:693380..693398, +
7.12e-98FFCP PHASE2:Hg19::chr2:693380..693398,+#_e3592ada75472de93964bc8b01718aa4p@chr2:693380..693398, +
1.58e-86FFCP PHASE2:Mm9::chr18:44264202..44264213,+#_3b2bf352079d1a022ce1c9522b9b5110p4@Spink12
1.58e-86FFCP PHASE1:Mm9::chr18:44264202..44264213,+#_3b2bf352079d1a022ce1c9522b9b5110p4@Spink12
2.81e-78FFCP PHASE2:Hg19::chr15:66420804..66420837,-#_625bd56ad734e385381b843cd2fe98cap4@MEGF11
2.81e-78FFCP PHASE1:Hg19::chr15:66420804..66420837,-#_625bd56ad734e385381b843cd2fe98cap4@MEGF11
1.04e-71FFCP PHASE1:Hg19::chr10:102495147..102495159,+#_15c0338b883399fdbd8f506c24c999cdp4@PAX2
1.04e-71FFCP PHASE2:Hg19::chr10:102495147..102495159,+#_15c0338b883399fdbd8f506c24c999cdp4@PAX2
1.28e-69FFCP PHASE2:Hg19::chr7:27219833..27219845,-#_5ac4ac0a461e2936ec059f1e2e5ba1e5p7@HOXA10
1.28e-69FFCP PHASE1:Hg19::chr7:27219833..27219845,-#_5ac4ac0a461e2936ec059f1e2e5ba1e5p7@HOXA10
4.01e-67FFCP PHASE2:Hg19::chr10:102505954..102505973,+#_e980f55b99064a2466be6bc8d5320394p3@PAX2
4.01e-67FFCP PHASE1:Hg19::chr10:102505954..102505973,+#_e980f55b99064a2466be6bc8d5320394p3@PAX2
1.1e-61FFCP PHASE1:Hg19::chr1:1100457..1100470,+#_87bca8656149280ac9f661fa29378448p@chr1:1100457..1100470, +
1.1e-61FFCP PHASE2:Hg19::chr1:1100457..1100470,+#_87bca8656149280ac9f661fa29378448p@chr1:1100457..1100470, +
3.28e-58FFCP PHASE1:Mm9::chr9:26688157..26688159,-#_84c76bf0c1e0476c0a3dd256f65943d6p@chr9:26688157..26688159, -
3.28e-58FFCP PHASE1:Mm9::chr5:100634942..100634968,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr5:100634942..100634968, +
3.28e-58FFCP PHASE2:Mm9::chr14:66589365..66589371,+#_84c76bf0c1e0476c0a3dd256f65943d6p19@Clu
3.28e-58FFCP PHASE2:Mm9::chr5:31379377..31379384,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr5:31379377..31379384, +
3.28e-58FFCP PHASE2:Mm9::chr16:92995710..92995753,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr16:92995710..92995753, +
3.28e-58FFCP PHASE1:Mm9::chr4:106731469..106731481,-#_84c76bf0c1e0476c0a3dd256f65943d6p@chr4:106731469..106731481, -
3.28e-58FFCP PHASE1:Mm9::chr12:16664775..16664784,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr12:16664775..16664784, +
3.28e-58FFCP PHASE1:Mm9::chrX:156829476..156829504,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chrX:156829476..156829504, +
3.28e-58FFCP PHASE1:Mm9::chr9:35651788..35651804,-#_84c76bf0c1e0476c0a3dd256f65943d6p1@9230110F15Rik
3.28e-58FFCP PHASE1:Mm9::chr11:59845404..59845416,-#_84c76bf0c1e0476c0a3dd256f65943d6p@chr11:59845404..59845416, -
3.28e-58FFCP PHASE1:Mm9::chr4:138824620..138824627,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr4:138824620..138824627, +
3.28e-58FFCP PHASE1:Mm9::chr13:21379125..21379144,-#_84c76bf0c1e0476c0a3dd256f65943d6p@chr13:21379125..21379144, -
3.28e-58FFCP PHASE2:Mm9::chr11:101959282..101959299,-#_84c76bf0c1e0476c0a3dd256f65943d6p@chr11:101959282..101959299, -
3.28e-58FFCP PHASE2:Mm9::chr1:156048695..156048707,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr1:156048695..156048707, +
3.28e-58FFCP PHASE1:Mm9::chrX:75798114..75798125,-#_84c76bf0c1e0476c0a3dd256f65943d6p@chrX:75798114..75798125, -
3.28e-58FFCP PHASE1:Mm9::chr19:24582739..24582748,-#_84c76bf0c1e0476c0a3dd256f65943d6p@chr19:24582739..24582748, -
3.28e-58FFCP PHASE2:Mm9::chr9:70779586..70779596,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr9:70779586..70779596, +
3.28e-58FFCP PHASE2:Mm9::chr7:6204391..6204398,+#_84c76bf0c1e0476c0a3dd256f65943d6p2@Gm6792
3.28e-58FFCP PHASE2:Mm9::chr12:114385720..114385732,-#_84c76bf0c1e0476c0a3dd256f65943d6p@chr12:114385720..114385732, -
3.28e-58FFCP PHASE2:Mm9::chr19:17585885..17585901,-#_84c76bf0c1e0476c0a3dd256f65943d6p@chr19:17585885..17585901, -
3.28e-58FFCP PHASE2:Mm9::chrX:10488683..10488691,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chrX:10488683..10488691, +
3.28e-58FFCP PHASE2:Mm9::chr13:21379322..21379338,-#_84c76bf0c1e0476c0a3dd256f65943d6p@chr13:21379322..21379338, -
3.28e-58FFCP PHASE2:Mm9::chr9:35651807..35651818,-#_84c76bf0c1e0476c0a3dd256f65943d6p3@9230110F15Rik
3.28e-58FFCP PHASE1:Mm9::chr12:110132148..110132154,+#_84c76bf0c1e0476c0a3dd256f65943d6p3@Wdr25
3.28e-58FFCP PHASE2:Mm9::chr6:18338054..18338077,-#_84c76bf0c1e0476c0a3dd256f65943d6p@chr6:18338054..18338077, -
3.28e-58FFCP PHASE2:Mm9::chr9:26731771..26731780,-#_84c76bf0c1e0476c0a3dd256f65943d6p@chr9:26731771..26731780, -
3.28e-58FFCP PHASE2:Mm9::chr7:109379335..109379338,+#_84c76bf0c1e0476c0a3dd256f65943d6p21@Pgap2
3.28e-58FFCP PHASE1:Mm9::chr5:124447371..124447383,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr5:124447371..124447383, +
3.28e-58FFCP PHASE1:Mm9::chr11:53938008..53938022,+#_84c76bf0c1e0476c0a3dd256f65943d6p11@P4ha2
3.28e-58FFCP PHASE1:Mm9::chr10:61976287..61976297,-#_84c76bf0c1e0476c0a3dd256f65943d6p@chr10:61976287..61976297, -
3.28e-58FFCP PHASE2:Mm9::chr1:90155923..90155932,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr1:90155923..90155932, +
3.28e-58FFCP PHASE2:Mm9::chr18:44319583..44319592,-#_84c76bf0c1e0476c0a3dd256f65943d6p@chr18:44319583..44319592, -
3.28e-58FFCP PHASE2:Mm9::chr2:148676901..148676906,-#_84c76bf0c1e0476c0a3dd256f65943d6p8@9230104L09Rik
3.28e-58FFCP PHASE1:Mm9::chr8:107073888..107073914,-#_84c76bf0c1e0476c0a3dd256f65943d6p@chr8:107073888..107073914, -
3.28e-58FFCP PHASE1:Mm9::chr13:21378871..21378901,-#_84c76bf0c1e0476c0a3dd256f65943d6p@chr13:21378871..21378901, -
3.28e-58FFCP PHASE2:Mm9::chr8:25706249..25706254,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr8:25706249..25706254, +
3.28e-58FFCP PHASE2:Mm9::chr11:34107562..34107572,-#_84c76bf0c1e0476c0a3dd256f65943d6p@chr11:34107562..34107572, -
3.28e-58FFCP PHASE2:Mm9::chr1:155722142..155722175,-#_84c76bf0c1e0476c0a3dd256f65943d6p@chr1:155722142..155722175, -
3.28e-58FFCP PHASE1:Mm9::chr2:152290340..152290344,-#_84c76bf0c1e0476c0a3dd256f65943d6p2@Defb23
3.28e-58FFCP PHASE1:Mm9::chr9:70779586..70779596,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr9:70779586..70779596, +
3.28e-58FFCP PHASE1:Mm9::chr9:26610184..26610191,-#_84c76bf0c1e0476c0a3dd256f65943d6p4@Glb1l2
3.28e-58FFCP PHASE1:Mm9::chr14:63630486..63630493,+#_84c76bf0c1e0476c0a3dd256f65943d6p5@Defb43
3.28e-58FFCP PHASE1:Mm9::chr10:127470322..127470326,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr10:127470322..127470326, +
3.28e-58FFCP PHASE1:Mm9::chr2:25349402..25349409,-#_84c76bf0c1e0476c0a3dd256f65943d6p3@Lcn12
3.28e-58FFCP PHASE1:Mm9::chr17:73221016..73221031,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr17:73221016..73221031, +
3.28e-58FFCP PHASE1:Mm9::chr13:46041606..46041640,-#_84c76bf0c1e0476c0a3dd256f65943d6p@chr13:46041606..46041640, -
3.28e-58FFCP PHASE2:Mm9::chr1:36016859..36016897,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr1:36016859..36016897, +
3.28e-58FFCP PHASE2:Mm9::chr14:52542711..52542716,-#_84c76bf0c1e0476c0a3dd256f65943d6p2@Rnase13
3.28e-58FFCP PHASE2:Mm9::chr14:103837894..103837900,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr14:103837894..103837900, +
3.28e-58FFCP PHASE1:Mm9::chr9:34813361..34813403,-#_84c76bf0c1e0476c0a3dd256f65943d6p@chr9:34813361..34813403, -
3.28e-58FFCP PHASE2:Mm9::chr12:110131610..110131621,-#_84c76bf0c1e0476c0a3dd256f65943d6p11@Wars
3.28e-58FFCP PHASE1:Mm9::chr7:75293847..75293851,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr7:75293847..75293851, +
3.28e-58FFCP PHASE1:Mm9::chr14:51627616..51627623,+#_84c76bf0c1e0476c0a3dd256f65943d6p2@Rnase10
3.28e-58FFCP PHASE2:Mm9::chr11:20817297..20817313,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr11:20817297..20817313, +
3.28e-58FFCP PHASE2:Mm9::chr11:116901482..116901494,-#_84c76bf0c1e0476c0a3dd256f65943d6p2@ENSMUST00000152401
3.28e-58FFCP PHASE2:Mm9::chr12:16664708..16664723,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr12:16664708..16664723, +
3.28e-58FFCP PHASE1:Mm9::chrX:20419453..20419476,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chrX:20419453..20419476, +
3.28e-58FFCP PHASE2:Mm9::chr2:160573108..160573123,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr2:160573108..160573123, +
3.28e-58FFCP PHASE1:Mm9::chr5:31379477..31379481,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr5:31379477..31379481, +
3.28e-58FFCP PHASE1:Mm9::chr2:164480465..164480471,-#_84c76bf0c1e0476c0a3dd256f65943d6p2@Wfdc9
3.28e-58FFCP PHASE1:Mm9::chr17:24865194..24865204,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr17:24865194..24865204, +
3.28e-58FFCP PHASE2:Mm9::chr6:83487114..83487124,-#_84c76bf0c1e0476c0a3dd256f65943d6p@chr6:83487114..83487124, -
3.28e-58FFCP PHASE1:Mm9::chr4:33600466..33600491,-#_84c76bf0c1e0476c0a3dd256f65943d6p@chr4:33600466..33600491, -
3.28e-58FFCP PHASE1:Mm9::chr1:43367743..43367754,-#_84c76bf0c1e0476c0a3dd256f65943d6p@chr1:43367743..43367754, -
3.28e-58FFCP PHASE1:Mm9::chr13:21380670..21380678,-#_84c76bf0c1e0476c0a3dd256f65943d6p@chr13:21380670..21380678, -
3.28e-58FFCP PHASE2:Mm9::chr13:21379125..21379144,-#_84c76bf0c1e0476c0a3dd256f65943d6p@chr13:21379125..21379144, -
3.28e-58FFCP PHASE2:Mm9::chr13:52712765..52712772,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr13:52712765..52712772, +
3.28e-58FFCP PHASE2:Mm9::chr14:51734060..51734066,+#_84c76bf0c1e0476c0a3dd256f65943d6p5@Eddm3b
3.28e-58FFCP PHASE1:Mm9::chr9:26727675..26727681,-#_84c76bf0c1e0476c0a3dd256f65943d6p@chr9:26727675..26727681, -
3.28e-58FFCP PHASE1:Mm9::chr16:23308182..23308185,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr16:23308182..23308185, +
3.28e-58FFCP PHASE1:Mm9::chr10:28772042..28772046,-#_84c76bf0c1e0476c0a3dd256f65943d6p@chr10:28772042..28772046, -
3.28e-58FFCP PHASE2:Mm9::chr5:31379486..31379501,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr5:31379486..31379501, +
3.28e-58FFCP PHASE1:Mm9::chr8:25706074..25706082,-#_84c76bf0c1e0476c0a3dd256f65943d6p3@Ido1
3.28e-58FFCP PHASE2:Mm9::chrX:75798097..75798101,-#_84c76bf0c1e0476c0a3dd256f65943d6p@chrX:75798097..75798101, -
3.28e-58FFCP PHASE2:Mm9::chr8:22061771..22061777,-#_84c76bf0c1e0476c0a3dd256f65943d6p3@Gm6040, p3@LOC100503992
3.28e-58FFCP PHASE2:Mm9::chrX:160347529..160347538,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chrX:160347529..160347538, +
3.28e-58FFCP PHASE2:Mm9::chr1:43367743..43367754,-#_84c76bf0c1e0476c0a3dd256f65943d6p@chr1:43367743..43367754, -
3.28e-58FFCP PHASE1:Mm9::chrX:160347529..160347538,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chrX:160347529..160347538, +
3.28e-58FFCP PHASE2:Mm9::chr11:96150839..96150842,-#_84c76bf0c1e0476c0a3dd256f65943d6p@chr11:96150839..96150842, -
3.28e-58FFCP PHASE2:Mm9::chr5:110773795..110773801,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr5:110773795..110773801, +
3.28e-58FFCP PHASE2:Mm9::chr5:35930667..35930691,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr5:35930667..35930691, +
3.28e-58FFCP PHASE1:Mm9::chr14:52542661..52542668,-#_84c76bf0c1e0476c0a3dd256f65943d6p3@Rnase13
3.28e-58FFCP PHASE1:Mm9::chr13:21379261..21379264,-#_84c76bf0c1e0476c0a3dd256f65943d6p@chr13:21379261..21379264, -
3.28e-58FFCP PHASE1:Mm9::chr1:89597834..89597840,+#_84c76bf0c1e0476c0a3dd256f65943d6p@chr1:89597834..89597840, +
3.28e-58FFCP PHASE2:Mm9::chr13:21380670..21380678,-#_84c76bf0c1e0476c0a3dd256f65943d6p@chr13:21380670..21380678, -
3.28e-58FFCP PHASE2:Mm9::chr9:35715997..35716008,+#_84c76bf0c1e0476c0a3dd256f65943d6p1@9230113P08Rik