CL:0000790: Difference between revisions
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|name=immature alpha-beta T cell | |name=immature alpha-beta T cell | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of= | |part_of= |
Latest revision as of 16:37, 12 September 2014
Name: | immature alpha-beta T cell |
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Namespace: | FANTOM |
Definition: | "An alpha-beta T cell that has an immature phenotype and has not completed T cell selection." [GOC:add, GOC:tfm, ISBN:0781735149] |
Synonyms: |
"immature alpha-beta T lymphocyte" EXACT [] "immature alpha-beta T-cell" EXACT [] "immature alpha-beta T-lymphocyte" EXACT [] |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | CL:0000789(alpha-beta T cell),CL:0002420(immature T cell) |
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Children
is a: | CL:0000809 (double-positive, alpha-beta thymocyte),CL:0000810 (CD4-positive, alpha-beta thymocyte),CL:0000914 (immature NK T cell) |
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develops from: | CL:0000791 (mature alpha-beta T cell) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000790 (immature alpha-beta T cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data