UBERON:0002018: Difference between revisions
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|located_in= | |located_in= | ||
|name=synovial membrane of synovial joint | |name=synovial membrane of synovial joint | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of=UBERON:0002217 | |part_of=UBERON:0002217 |
Latest revision as of 17:24, 12 September 2014
Name: | synovial membrane of synovial joint | ||
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Namespace: | FANTOM | ||
Definition: | "Soft tissue that lines the non-cartilaginous surfaces within joints with cavities (synovial joints)." [Wikipedia:Synovial_membrane] | ||
Xrefs: |
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Synonyms: |
"membrana synovialis capsulae articularis" EXACT LATIN [Wikipedia:Synovial_membrane] "stratum synoviale" EXACT [FMA:66762, FMA:TA] "synovial layer" BROAD [FMA:66762] "synovial membrane" BROAD [AEO:0000181] "synovium" BROAD [BTO:0001823, VHOG:0001282] | ||
Alt_id: | UBERON:FMA_66762-MA_0000114 | ||
Subset: | uberon_slim |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | UBERON:0006915(stratified squamous epithelium),UBERON:0007616(layer of synovial tissue),UBERON:0012275(meso-epithelium) |
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part_of: | UBERON:0002217(synovial joint) |
Children
part of: | CL:0000214 (synovial cell) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10441-106E9 (synovial sarcoma cell line:HS-SY-II)
- 11291-117A4 (Synoviocyte, donor1)
- 11368-117I9 (Synoviocyte, donor2)
- 11440-118H9 (Synoviocyte, donor3)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0002018 (synovial membrane of synovial joint), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data