UBERON:0002199: Difference between revisions
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|located_in= | |located_in= | ||
|name=integument | |name=integument | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of=UBERON:0002416 | |part_of=UBERON:0002416 | ||
Latest revision as of 17:27, 12 September 2014
| Name: | integument | |
|---|---|---|
| Namespace: | FANTOM | |
| Definition: | "The dermis, epidermis and hypodermis." [Wikipedia:Integument] | |
| Xrefs: |
| |
| Synonyms: |
"dermal system" RELATED [BTO:0000634] "dermoid system" RELATED [BTO:0000634] "Hautsystem" RELATED [BTO:0000634] "integumentum commune" EXACT [FMA:74657, FMA:TA] "skin" RELATED [] "tegument" RELATED [BTO:0000634] "the integument" EXACT [FMA:74657] | |
| Comments: | Usage notes: in FMA intergument | |
| Alt_id: | UBERON:FMA_74657-ZFA_0000368 | |
| Subset: |
uberon_slim vertebrate_core |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0003102(surface structure),UBERON:0011216(organ system subdivision) |
|---|---|
| part_of: | UBERON:0002416(integumental system) |
Children
| is a: | FF:0011174 (Skin - armpit hair follicle),FF:0011178 (Skin - torso) |
|---|---|
| part of: | UBERON:0002072 (hypodermis),UBERON:0002097 (skin of body),UBERON:0010083 (future dermis),UBERON:0011272 (embryonic skin basal layer),UBERON:3000961 (external integument structure) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10065-101I2 (skin, fetal, donor1)
- 10074-102A2 (skin, adult, donor1)
- 10273-104E3
- 10283-104F4
- 10284-104F5
- 10285-104F6
- 10286-104F7 (Skin - palm, donor1)
- 10287-104F8
- 10288-104F9 (tongue epidermis (fungiform papillae), donor1)
- 10289-104G1
... further results Mouse (Mus musculus)
- 10065-101I2 (skin, fetal, donor1)
- 10074-102A2 (skin, adult, donor1)
- 10273-104E3
- 10283-104F4
- 10284-104F5
- 10285-104F6
- 10286-104F7 (Skin - palm, donor1)
- 10287-104F8
- 10288-104F9 (tongue epidermis (fungiform papillae), donor1)
- 10289-104G1
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0002199 (integument), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
Property "Property value" (as page type) with input value "UBPROP:0000001 "Anatomical system that protects the body from damage, comprising the skin and its appendages.[AAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process., Property "Property value" (as page type) with input value "UBPROP:0000001 "Surface structure that is the outer protective covering of the body.[VSAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process., Property "Property value" (as page type) with input value "UBPROP:0000001 "The outer protective barrier that separates the animal from its aquatic environment. Le Guellec et al, 2004.[TAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
