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UBERON:0004732: Difference between revisions

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|located_in=
|located_in=
|name=segmental subdivision of nervous system
|name=segmental subdivision of nervous system
|namespace=
|namespace=FANTOM
|obo_creation_date=
|obo_creation_date=
|part_of=UBERON:0001016
|part_of=UBERON:0001016

Latest revision as of 17:47, 12 September 2014

Name:segmental subdivision of nervous system
Namespace:FANTOM
Definition:"An organ segment that is part of a nervous system [Obol]." [OBOL:automatic]
Xrefs:
links:
FBbt:00005140
Synonyms: "neuromere" RELATED [FBbt:00005140]
Comments:Editor note: revisit this after CARO is revised and/or we have defined metameric segment

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0000063(organ segment)
part_of:UBERON:0001016(nervous system)



Children

is a:UBERON:0002464 (nerve trunk),UBERON:0004733 (segmental subdivision of hindbrain)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004732 (segmental subdivision of nervous system), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data