UBERON:0005297: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 13: | Line 13: | ||
|located_in= | |located_in= | ||
|name=testis sex cord | |name=testis sex cord | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of=UBERON:0000473 | |part_of=UBERON:0000473 |
Latest revision as of 17:52, 12 September 2014
Name: | testis sex cord | ||
---|---|---|---|
Namespace: | FANTOM | ||
Definition: | "The testis cords are precursors to the rete testis. They play several different roles in the development of the male genitals[WP]." [Wikipedia:Testis_cords] | ||
Xrefs: |
| ||
Synonyms: |
"primary sex cord" RELATED [] "testis cord" EXACT [MP:0006424] "testis primary sex cords" EXACT [EHDAA2:0002011] "testis primitive sex cord" RELATED [] | ||
Comments: | check primary vs testis |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | UBERON:0004910(epithelium of male gonad),UBERON:0005295(sex cord) |
---|---|
develops_from: | UBERON:0010141(primitive sex cord of indifferent gonad) |
part_of: | UBERON:0000473(testis) |
Children
develops from: | UBERON:0001343 (seminiferous tubule of testis) |
---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0005297 (testis sex cord), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data