UBERON:0005425: Difference between revisions
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|located_in= | |located_in= | ||
|name=presumptive neural retina | |name=presumptive neural retina | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of=UBERON:0003072 | |part_of=UBERON:0003072 |
Latest revision as of 17:53, 12 September 2014
Name: | presumptive neural retina | |
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Namespace: | FANTOM | |
Definition: | "Portion of tissue that is the inner layer of the optic cup and will become the neural retina." [ZFIN:curator] | |
Xrefs: |
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Synonyms: |
"inner layer optic cup" EXACT [ZFA:0001071] "optic cup inner layer" EXACT [EHDAA2:0001304] "presumptive retinas" EXACT PLURAL [ZFA:0001071] | |
Subset: | vertebrate_core |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | UBERON:0006598(presumptive structure),UBERON:0010312(immature eye) |
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part_of: | UBERON:0003072(optic cup) |
Children
develops from: | UBERON:0003902 (retinal neural layer) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0005425 (presumptive neural retina), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data