UBERON:0009662: Difference between revisions
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|located_in= | |located_in= | ||
|name=hindbrain nucleus | |name=hindbrain nucleus | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of=UBERON:0002028 | |part_of=UBERON:0002028 |
Latest revision as of 18:06, 12 September 2014
Name: | hindbrain nucleus | |
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Namespace: | FANTOM | |
Definition: | "Nucleus located within the hindbrain." [ZFIN:curator] | |
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Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | UBERON:0002308(nucleus of brain),UBERON:0010314(structure with developmental contribution from neural crest) |
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part_of: | UBERON:0002028(hindbrain) |
Children
is a: | UBERON:0002148 (locus ceruleus) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10165-103B3 (locus coeruleus, adult, donor10252)
- 10182-103D2 (locus coeruleus - adult, donor10196)
- 10362-105F2 (locus coeruleus, newborn, donor10223)
- 10375-105G6 (locus coeruleus, adult, donor10258)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0009662 (hindbrain nucleus), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data