FFCP PHASE1:Hg19::chr13:46785927..46785972,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=3936 | |EntrezGene=entrezgene:3936 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=6528 | |HGNC=HGNC:6528 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt=Q5TBN5 | |UniProt=uniprot:Q5TBN5 | ||
|association_with_transcript=33bp_to_ENST00000442275_5end | |association_with_transcript=33bp_to_ENST00000442275_5end | ||
|cluster_id=chr13:46785927..46785972,- | |||
|description=CAGE_peak_5_at_LCP1_5end | |description=CAGE_peak_5_at_LCP1_5end | ||
|id=chr13:46785927..46785972,- | |id=chr13:46785927..46785972,- |
Revision as of 16:23, 24 July 2015
Short description: | p5@LCP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_LCP1_5end |
Coexpression cluster: | NA |
Association with transcript: | 33bp_to_ENST00000442275_5end |
EntrezGene: | 3936 |
HGNC: | 6528 |
UniProt: | Q5TBN5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p5@LCP1 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 2.28e-18 | 18 |
alpha-beta T cell | 2.28e-18 | 18 |
immature T cell | 2.28e-18 | 18 |
mature T cell | 2.28e-18 | 18 |
immature alpha-beta T cell | 2.28e-18 | 18 |
T cell | 1.30e-15 | 25 |
pro-T cell | 1.30e-15 | 25 |
hematopoietic stem cell | 1.68e-12 | 168 |
hematopoietic cell | 4.62e-11 | 177 |
lymphocyte | 1.09e-10 | 53 |
Showing 1 to 10 of 18 entries
Ontology term | p-value | n |
---|---|---|
adult organism | 2.57e-10 | 114 |
brainstem | 2.66e-08 | 6 |
gland of gut | 1.05e-07 | 10 |
thymus | 3.20e-07 | 4 |
hemolymphoid system gland | 3.20e-07 | 4 |
thymic region | 3.20e-07 | 4 |
pharyngeal gland | 3.20e-07 | 4 |
thymus primordium | 3.20e-07 | 4 |
Showing 1 to 8 of 8 entries