FFCP PHASE1:Hg19::chr18:56247409..56247424,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=115701 | |EntrezGene=entrezgene:115701 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=20565 | |HGNC=HGNC:20565 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
|association_with_transcript=-8bp_to_AK125243_5end | |association_with_transcript=-8bp_to_AK125243_5end | ||
|cluster_id=chr18:56247409..56247424,- | |||
|coexpression_cluster_id=C2468 | |coexpression_cluster_id=C2468 | ||
|description=CAGE_peak_13_at_ALPK2_5end | |description=CAGE_peak_13_at_ALPK2_5end |
Revision as of 01:36, 26 July 2015
Short description: | p13@ALPK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_ALPK2_5end |
Coexpression cluster: | C2468_clear_migratory_mesothelioma_Astrocyte_glioblastoma_alveolar_renal |
Association with transcript: | -8bp_to_AK125243_5end |
EntrezGene: | 115701 |
HGNC: | 20565 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p13@ALPK2 |
---|
0.0
2.5
5.0
7.5
10.0
12.5
15.0
17.5
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.01e-23 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.01e-23 | 42 |
defensive cell | 7.06e-20 | 48 |
phagocyte | 7.06e-20 | 48 |
monopoietic cell | 6.21e-15 | 59 |
monocyte | 6.21e-15 | 59 |
monoblast | 6.21e-15 | 59 |
promonocyte | 6.21e-15 | 59 |
macrophage dendritic cell progenitor | 2.68e-14 | 61 |
myeloid lineage restricted progenitor cell | 7.03e-13 | 66 |
Showing 1 to 10 of 29 entries
Ontology term | p-value | n |
---|---|---|
bone element | 1.04e-10 | 82 |
bone marrow | 1.31e-10 | 76 |
skeletal element | 2.36e-09 | 90 |
skeletal system | 5.71e-08 | 100 |
immune system | 6.86e-08 | 93 |
hematopoietic system | 2.82e-07 | 98 |
blood island | 2.82e-07 | 98 |
Showing 1 to 7 of 7 entries
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 2.05e-10 | 5 |
myotonic disease | 2.05e-10 | 5 |
muscle tissue disease | 2.05e-10 | 5 |
myopathy | 2.05e-10 | 5 |
muscular disease | 2.05e-10 | 5 |
myotonic dystrophy | 2.05e-10 | 5 |
Showing 1 to 6 of 6 entries