FFCP PHASE1:Hg19::chrX:123870889..123870903,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | ||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chrX:123870889..123870903,- | |||
|coexpression_cluster_id=C476 | |coexpression_cluster_id=C476 | ||
|description=CAGE_peak_at_chrX:123870889..123870903,- | |description=CAGE_peak_at_chrX:123870889..123870903,- | ||
Latest revision as of 05:32, 1 August 2015
| Short description: | p@chrX:123870889..123870903, - |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_at_chrX:123870889..123870903, - |
| Coexpression cluster: | C476_thymus_acute_Hodgkin_CD4_CD8_chronic_vein |
| Association with transcript: | NA |
| EntrezGene: | NA |
| HGNC: | NA |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p@chrX:123870889..123870903- |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| mature alpha-beta T cell | 9.10e-23 | 18 |
| alpha-beta T cell | 9.10e-23 | 18 |
| immature T cell | 9.10e-23 | 18 |
| mature T cell | 9.10e-23 | 18 |
| immature alpha-beta T cell | 9.10e-23 | 18 |
| CD4-positive, alpha-beta T cell | 5.96e-18 | 6 |
| T cell | 2.54e-16 | 25 |
| pro-T cell | 2.54e-16 | 25 |
| CD4-positive, alpha-beta thymocyte | 8.64e-13 | 1 |
| naive thymus-derived CD4-positive, alpha-beta T cell | 8.64e-13 | 1 |
Showing 1 to 10 of 30 entries
| Ontology term | p-value | n |
|---|---|---|
| thymus | 3.45e-27 | 4 |
| hemolymphoid system gland | 3.45e-27 | 4 |
| thymic region | 3.45e-27 | 4 |
| pharyngeal gland | 3.45e-27 | 4 |
| thymus primordium | 3.45e-27 | 4 |
| pharyngeal epithelium | 2.33e-18 | 6 |
| hemopoietic organ | 7.90e-16 | 7 |
| immune organ | 7.90e-16 | 7 |
| neck | 2.94e-11 | 10 |
| gland of gut | 2.94e-11 | 10 |
Showing 1 to 10 of 15 entries
